RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 IFIT3O14879 490 aaKnown RBP14.66□□□□□ -0.06
RABGGTA-213ENST00000560127 GPR182O15218 404 aa14.66□□□□□ -0.06
RABGGTA-213ENST00000560127 KLRC1P26715 233 aa14.66□□□□□ -0.06
RABGGTA-213ENST00000560127 PPM1AP35813 382 aa14.66□□□□□ -0.06
RABGGTA-213ENST00000560127 ACTR2P61160 394 aa14.66□□□□□ -0.06
RABGGTA-213ENST00000560127 KRT17Q04695 432 aa14.66□□□□□ -0.06
RABGGTA-213ENST00000560127 DSC3Q14574 896 aa14.66□□□□□ -0.06
RABGGTA-213ENST00000560127 SMC1AQ14683 1233 aaKnown RBP14.66□□□□□ -0.06
RABGGTA-213ENST00000560127 KIAA1841Q6NSI8 718 aa14.66□□□□□ -0.06
RABGGTA-213ENST00000560127 FAM228AQ86W67 206 aa14.66□□□□□ -0.06
RABGGTA-213ENST00000560127 PLCD3Q8N3E9 789 aa14.66□□□□□ -0.06
RABGGTA-213ENST00000560127 DTWD2Q8NBA8 298 aa14.66□□□□□ -0.06
RABGGTA-213ENST00000560127 ZNF558Q96NG5 402 aa14.66□□□□□ -0.06
RABGGTA-213ENST00000560127 IL25Q9H293 177 aa14.66□□□□□ -0.06
RABGGTA-213ENST00000560127 SPG21Q9NZD8 308 aa14.66□□□□□ -0.06
RABGGTA-213ENST00000560127 USTQ9Y2C2 406 aa14.66□□□□□ -0.06
RABGGTA-213ENST00000560127 MAFGO15525 162 aa14.65□□□□□ -0.06
RABGGTA-213ENST00000560127 EOMESO95936 686 aa14.65□□□□□ -0.06
RABGGTA-213ENST00000560127 UBE2SQ16763 222 aa14.65□□□□□ -0.06
RABGGTA-213ENST00000560127 ATAT1Q5SQI0 421 aa14.65□□□□□ -0.06
RABGGTA-213ENST00000560127 ODR4Q5SWX8 454 aa14.65□□□□□ -0.06
RABGGTA-213ENST00000560127 KIAA2013Q8IYS2 634 aa14.65□□□□□ -0.06
RABGGTA-213ENST00000560127 SLC39A11Q8N1S5 342 aa14.65□□□□□ -0.06
RABGGTA-213ENST00000560127 RRP36Q96EU6 259 aaKnown RBP14.65□□□□□ -0.06
RABGGTA-213ENST00000560127 SPZ1Q9BXG8 430 aa14.65□□□□□ -0.06
RABGGTA-213ENST00000560127 CYP26B1Q9NR63 512 aa14.65□□□□□ -0.06
RABGGTA-213ENST00000560127 DBR1Q9UK59 544 aaKnown RBP14.65□□□□□ -0.06
RABGGTA-213ENST00000560127 DOCK6Q96HP0 2047 aa14.65□□□□□ -0.06
RABGGTA-213ENST00000560127 KRT37O76014 449 aa14.64□□□□□ -0.07
RABGGTA-213ENST00000560127 LMNAP02545 664 aaKnown RBP14.64□□□□□ -0.07
RABGGTA-213ENST00000560127 HDAC1Q13547 482 aaPredicted RBP14.64□□□□□ -0.07
RABGGTA-213ENST00000560127 WTAPQ15007 396 aa14.64□□□□□ -0.07
RABGGTA-213ENST00000560127 LRRC43Q8N309 656 aa14.64□□□□□ -0.07
RABGGTA-213ENST00000560127 CYP2W1Q8TAV3 490 aa14.64□□□□□ -0.07
RABGGTA-213ENST00000560127 KCNG4Q8TDN1 519 aa14.64□□□□□ -0.07
RABGGTA-213ENST00000560127 PPP1R16BQ96T49 567 aa14.64□□□□□ -0.07
RABGGTA-213ENST00000560127 OSMRQ99650 979 aa14.64□□□□□ -0.07
RABGGTA-213ENST00000560127 RTP3Q9BQQ7 232 aa14.64□□□□□ -0.07
RABGGTA-213ENST00000560127 PSTPIP2Q9H939 334 aa14.64□□□□□ -0.07
RABGGTA-213ENST00000560127 KCNH7Q9NS40 1196 aa14.64□□□□□ -0.07
RABGGTA-213ENST00000560127 USP24Q9UPU5 2620 aa14.64□□□□□ -0.07
RABGGTA-213ENST00000560127 NFASCO94856 1347 aa14.64□□□□□ -0.07
RABGGTA-213ENST00000560127 MIA3Q5JRA6 1907 aa14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 ERICH2A1L162 156 aa14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 ZBTB42B2RXF5 422 aa14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 HIP1O00291 1037 aa14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 HOXA2O43364 376 aa14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 ATG7O95352 703 aa14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 EPCAMP16422 314 aa14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 CRYBB1P53674 252 aaPredicted RBP14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 TRDNQ13061 729 aa14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 ITGB3BPQ13352 177 aaPredicted RBP14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 TDGQ13569 410 aa14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 KIZQ2M2Z5 673 aa14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 CATIPQ7Z7H3 387 aa14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 PLEKHM2Q8IWE5 1019 aa14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 SEMA4AQ9H3S1 761 aa14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 DZANK1Q9NVP4 752 aa14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 PCDHA6Q9UN73 950 aa14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 DUSP12Q9UNI6 340 aa14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 PCDHA8Q9Y5H6 950 aa14.63□□□□□ -0.07
RABGGTA-213ENST00000560127 MTCL1Q9Y4B5 1905 aaKnown RBP14.62□□□□□ -0.07
RABGGTA-213ENST00000560127 IGKV6D-21A0A0A0MT36 114 aa14.62□□□□□ -0.07
RABGGTA-213ENST00000560127 HBP1O60381 514 aa14.62□□□□□ -0.07
RABGGTA-213ENST00000560127 GPR32O75388 356 aa14.62□□□□□ -0.07
RABGGTA-213ENST00000560127 CXCL14O95715 111 aa14.62□□□□□ -0.07
RABGGTA-213ENST00000560127 SMARCA1P28370 1054 aa14.62□□□□□ -0.07
RABGGTA-213ENST00000560127 SLC26A2P50443 739 aa14.62□□□□□ -0.07
RABGGTA-213ENST00000560127 PUM1Q14671 1186 aaKnown RBP eCLIP14.62□□□□□ -0.07
RABGGTA-213ENST00000560127 CLLU1OSQ5K130 101 aa14.62□□□□□ -0.07
RABGGTA-213ENST00000560127 SIX5Q8N196 739 aa14.62□□□□□ -0.07
RABGGTA-213ENST00000560127 SLC22A17Q8WUG5 538 aa14.62□□□□□ -0.07
RABGGTA-213ENST00000560127 MXRA8Q9BRK3 442 aa14.62□□□□□ -0.07
RABGGTA-213ENST00000560127 SDF4Q9BRK5 362 aa14.62□□□□□ -0.07
RABGGTA-213ENST00000560127 OSBPL3Q9H4L5 887 aa14.62□□□□□ -0.07
RABGGTA-213ENST00000560127 SEC63Q9UGP8 760 aaKnown RBP14.62□□□□□ -0.07
RABGGTA-213ENST00000560127 TAF6LQ9Y6J9 622 aa14.62□□□□□ -0.07
RABGGTA-213ENST00000560127 R4GN57 208 aa14.62□□□□□ -0.07
RABGGTA-213ENST00000560127 COL1A2P08123 1366 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 SPDYE3A6NKU9 549 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 VTNP04004 478 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 CYP21A2P08686 494 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 CA8P35219 290 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 ANTXR2P58335 489 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 TMC5Q6UXY8 1006 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 ECHDC2Q86YB7 292 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 ABI1Q8IZP0 508 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 SRBD1Q8N5C6 995 aaKnown RBP14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 IGDCC4Q8TDY8 1250 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 AUTS2Q8WXX7 1259 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 CNTNAP3BQ96NU0 1288 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 MAP3K14Q99558 947 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 MYL10Q9BUA6 226 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 CNTNAP3Q9BZ76 1288 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 ZBP1Q9H171 429 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 KCNK12Q9HB15 430 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 FBXL21Q9UKT6 434 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 ZFHX4Q86UP3 3567 aa14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 CNOT1A5YKK6 2376 aaKnown RBP14.61□□□□□ -0.07
RABGGTA-213ENST00000560127 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms