RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 EFCAB14O75071 495 aa16.65■□□□□ 0.26
RABGGTA-211ENST00000559850 GJB5O95377 273 aa16.65■□□□□ 0.26
RABGGTA-211ENST00000559850 TBC1D8BQ0IIM8 1120 aa16.65■□□□□ 0.26
RABGGTA-211ENST00000559850 APBB2Q92870 758 aa16.65■□□□□ 0.26
RABGGTA-211ENST00000559850 CEP89Q96ST8 783 aa16.65■□□□□ 0.26
RABGGTA-211ENST00000559850 LXNQ9BS40 222 aa16.65■□□□□ 0.26
RABGGTA-211ENST00000559850 NIFKQ9BYG3 293 aaKnown RBP16.65■□□□□ 0.26
RABGGTA-211ENST00000559850 PADI3Q9ULW8 664 aa16.65■□□□□ 0.26
RABGGTA-211ENST00000559850 SMC3Q9UQE7 1217 aa16.65■□□□□ 0.26
RABGGTA-211ENST00000559850 EPOPA6NHQ4 379 aa16.64■□□□□ 0.25
RABGGTA-211ENST00000559850 GPR32O75388 356 aa16.64■□□□□ 0.25
RABGGTA-211ENST00000559850 RPLP2P05387 115 aaKnown RBP16.64■□□□□ 0.25
RABGGTA-211ENST00000559850 P4HBP07237 508 aaKnown RBP16.64■□□□□ 0.25
RABGGTA-211ENST00000559850 FOSL2P15408 326 aa16.64■□□□□ 0.25
RABGGTA-211ENST00000559850 TOB1P50616 345 aaPredicted RBP16.64■□□□□ 0.25
RABGGTA-211ENST00000559850 TAP1Q03518 808 aa16.64■□□□□ 0.25
RABGGTA-211ENST00000559850 NFX1Q12986 1120 aaKnown RBP16.64■□□□□ 0.25
RABGGTA-211ENST00000559850 PAK2Q13177 524 aa16.64■□□□□ 0.25
RABGGTA-211ENST00000559850 RTN4RL1Q86UN2 441 aaPredicted RBP16.64■□□□□ 0.25
RABGGTA-211ENST00000559850 TPH2Q8IWU9 490 aa16.64■□□□□ 0.25
RABGGTA-211ENST00000559850 EIF2AK1Q9BQI3 630 aaKnown RBP16.64■□□□□ 0.25
RABGGTA-211ENST00000559850 TMX1Q9H3N1 280 aa16.64■□□□□ 0.25
RABGGTA-211ENST00000559850 KDM3AQ9Y4C1 1321 aa16.64■□□□□ 0.25
RABGGTA-211ENST00000559850 ENPP3O14638 875 aa16.63■□□□□ 0.25
RABGGTA-211ENST00000559850 SLITRK3O94933 977 aa16.63■□□□□ 0.25
RABGGTA-211ENST00000559850 U2AF2P26368 475 aaKnown RBP eCLIP16.63■□□□□ 0.253e-6■■■■■ 26.9
RABGGTA-211ENST00000559850 NLRP11P59045 1033 aaKnown RBP16.63■□□□□ 0.25
RABGGTA-211ENST00000559850 ADGRE1Q14246 886 aa16.63■□□□□ 0.25
RABGGTA-211ENST00000559850 ARNTL2Q8WYA1 636 aa16.63■□□□□ 0.25
RABGGTA-211ENST00000559850 MAP7D2Q96T17 732 aa16.63■□□□□ 0.25
RABGGTA-211ENST00000559850 ERVK-5Q9HDB9 667 aa16.63■□□□□ 0.25
RABGGTA-211ENST00000559850 FOXD4L1Q9NU39 408 aa16.63■□□□□ 0.25
RABGGTA-211ENST00000559850 MTUS1Q9ULD2 1270 aa16.63■□□□□ 0.25
RABGGTA-211ENST00000559850 NOL7Q9UMY1 257 aaKnown RBP16.63■□□□□ 0.25
RABGGTA-211ENST00000559850 PCDHB6Q9Y5E3 794 aa16.63■□□□□ 0.25
RABGGTA-211ENST00000559850 KIAA1671Q9BY89 1806 aa16.63■□□□□ 0.25
RABGGTA-211ENST00000559850 MYO9BQ13459 2157 aa16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 H3BQV1 296 aa16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 MGEA5O60502 916 aa16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 RPS6KA5O75582 802 aa16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 OR52Z1P0C646 297 aa16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 FGFR4P22455 802 aa16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 TMOD1P28289 359 aa16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 TECP42680 631 aa16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 CRYBB1P53674 252 aaPredicted RBP16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 FAM228AQ86W67 206 aa16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 KSR1Q8IVT5 923 aa16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 TOP1MTQ969P6 601 aa16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 CEP170P1Q96L14 293 aa16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 RAD9AQ99638 391 aa16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 ADAMTS10Q9H324 1103 aa16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 CYP26B1Q9NR63 512 aa16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 KIF3AQ9Y496 699 aa16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 COL4A6Q14031 1691 aa16.62■□□□□ 0.25
RABGGTA-211ENST00000559850 CDH23Q9H251 3354 aa16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 LINC01553A4QN01 128 aa16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 MAFO75444 373 aaPredicted RBP16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 CSDE1O75534 798 aaKnown RBP16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 YWHABP31946 246 aaKnown RBP16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 GPC3P51654 580 aa16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 CUL4AQ13619 759 aa16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 XKR9Q5GH70 373 aa16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 C4orf19Q8IY42 314 aa16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 C4orf32Q8N8J7 132 aa16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 USP38Q8NB14 1042 aa16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 IL27Q8NEV9 243 aa16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 PPM1EQ8WY54 764 aa16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 SCLT1Q96NL6 688 aa16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 YME1L1Q96TA2 773 aa16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 HSD17B14Q9BPX1 270 aa16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 ZSWIM4Q9H7M6 989 aa16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 ST3GAL5Q9UNP4 418 aa16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 SQORQ9Y6N5 450 aa16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 TTC3P53804 2025 aa16.61■□□□□ 0.25
RABGGTA-211ENST00000559850 IGKV6-21A0A0C4DH24 114 aa16.6■□□□□ 0.25
RABGGTA-211ENST00000559850 DKC1O60832 514 aaKnown RBP eCLIP16.6■□□□□ 0.25
RABGGTA-211ENST00000559850 IGFBP4P22692 258 aa16.6■□□□□ 0.25
RABGGTA-211ENST00000559850 HTRA4P83105 476 aaPredicted RBP16.6■□□□□ 0.25
RABGGTA-211ENST00000559850 LARP1BQ659C4 914 aaKnown RBP16.6■□□□□ 0.25
RABGGTA-211ENST00000559850 RHPN2Q8IUC4 686 aa16.6■□□□□ 0.25
RABGGTA-211ENST00000559850 MAFAQ8NHW3 353 aaPredicted RBP16.6■□□□□ 0.25
RABGGTA-211ENST00000559850 NLRP7Q8WX94 980 aa16.6■□□□□ 0.25
RABGGTA-211ENST00000559850 TMEM143Q96AN5 459 aa16.6■□□□□ 0.25
RABGGTA-211ENST00000559850 C17orf80Q9BSJ5 609 aa16.6■□□□□ 0.25
RABGGTA-211ENST00000559850 SUCLA2Q9P2R7 463 aaPredicted RBP16.6■□□□□ 0.25
RABGGTA-211ENST00000559850 RALGAPA2Q2PPJ7 1873 aa16.59■□□□□ 0.25
RABGGTA-211ENST00000559850 A0A087WZ62 844 aa16.59■□□□□ 0.25
RABGGTA-211ENST00000559850 MED24O75448 989 aa16.59■□□□□ 0.25
RABGGTA-211ENST00000559850 TRAPPC10P48553 1259 aa16.59■□□□□ 0.25
RABGGTA-211ENST00000559850 GATMP50440 423 aa16.59■□□□□ 0.25
RABGGTA-211ENST00000559850 POLGP54098 1239 aaPredicted RBP16.59■□□□□ 0.25
RABGGTA-211ENST00000559850 PTGDRQ13258 359 aa16.59■□□□□ 0.25
RABGGTA-211ENST00000559850 PIGOQ8TEQ8 1089 aa16.59■□□□□ 0.25
RABGGTA-211ENST00000559850 NLRP4Q96MN2 994 aa16.59■□□□□ 0.25
RABGGTA-211ENST00000559850 GAS2L1Q99501 681 aaPredicted RBP16.59■□□□□ 0.25
RABGGTA-211ENST00000559850 FDXACB1Q9BRP7 624 aaPredicted RBP16.59■□□□□ 0.25
RABGGTA-211ENST00000559850 INSL6Q9Y581 213 aa16.59■□□□□ 0.25
RABGGTA-211ENST00000559850 CHD7Q9P2D1 2997 aa16.59■□□□□ 0.25
RABGGTA-211ENST00000559850 FNDC1Q4ZHG4 1894 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms