RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 ATP2C1P98194 919 aaPredicted RBP15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 PLA2G4FQ68DD2 849 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 FAM109BQ6ICB4 259 aaPredicted RBP15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 LRRC71Q8N4P6 559 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 IGSF22Q8N9C0 903 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 SLC7A3Q8WY07 619 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 MTMR6Q9Y217 621 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 GINS2Q9Y248 185 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 STK24Q9Y6E0 443 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 ZBTB39O15060 712 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 BMP15O95972 392 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 VTNP04004 478 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 ATP2A2P16615 1042 aaKnown RBP15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 CDC42EP1Q00587 391 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 TCTN1Q2MV58 587 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 XKR9Q5GH70 373 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 ARL6IP4Q66PJ3 421 aaKnown RBP15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 HAUS3Q68CZ6 603 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 TSHZ1Q6ZSZ6 1077 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 SLC9A7Q96T83 725 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 ZSCAN16Q9H4T2 348 aaPredicted RBP15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 ANKEF1Q9NU02 776 aa15.28■□□□□ 0.04
CHRNB4-204ENST00000559849 SIP14410 1827 aa15.27■□□□□ 0.04
CHRNB4-204ENST00000559849 GRXCR1A8MXD5 290 aa15.27■□□□□ 0.03
CHRNB4-204ENST00000559849 MUTP22033 750 aa15.27■□□□□ 0.03
CHRNB4-204ENST00000559849 CRYBB1P53674 252 aaPredicted RBP15.27■□□□□ 0.03
CHRNB4-204ENST00000559849 WDR5P61964 334 aaKnown RBP15.27■□□□□ 0.03
CHRNB4-204ENST00000559849 KIZQ2M2Z5 673 aa15.27■□□□□ 0.03
CHRNB4-204ENST00000559849 ZNF579Q8NAF0 562 aaKnown RBP15.27■□□□□ 0.03
CHRNB4-204ENST00000559849 NACC1Q96RE7 527 aa15.27■□□□□ 0.03
CHRNB4-204ENST00000559849 GPR32O75388 356 aa15.26■□□□□ 0.03
CHRNB4-204ENST00000559849 MED24O75448 989 aa15.26■□□□□ 0.03
CHRNB4-204ENST00000559849 RFC5P40937 340 aa15.26■□□□□ 0.03
CHRNB4-204ENST00000559849 POLGP54098 1239 aaPredicted RBP15.26■□□□□ 0.03
CHRNB4-204ENST00000559849 NLRP11P59045 1033 aaKnown RBP15.26■□□□□ 0.03
CHRNB4-204ENST00000559849 RESTQ13127 1097 aa15.26■□□□□ 0.03
CHRNB4-204ENST00000559849 FAM43BQ6ZT52 329 aaPredicted RBP15.26■□□□□ 0.03
CHRNB4-204ENST00000559849 DHX33Q9H6R0 707 aaKnown RBP15.26■□□□□ 0.03
CHRNB4-204ENST00000559849 AGO3Q9H9G7 860 aaKnown RBP15.26■□□□□ 0.03
CHRNB4-204ENST00000559849 CDHR5Q9HBB8 845 aa15.26■□□□□ 0.03
CHRNB4-204ENST00000559849 MICAL3Q7RTP6 2002 aa15.26■□□□□ 0.03
CHRNB4-204ENST00000559849 CD52P31358 61 aa15.26■□□□□ 0.03
CHRNB4-204ENST00000559849 MKRN4PQ13434 485 aaPredicted RBP15.26■□□□□ 0.03
CHRNB4-204ENST00000559849 IL17AQ16552 155 aa15.26■□□□□ 0.03
CHRNB4-204ENST00000559849 PIGOQ8TEQ8 1089 aa15.26■□□□□ 0.03
CHRNB4-204ENST00000559849 PADI3Q9ULW8 664 aa15.26■□□□□ 0.03
CHRNB4-204ENST00000559849 MYO9BQ13459 2157 aa15.25■□□□□ 0.03
CHRNB4-204ENST00000559849 GAS2O43903 313 aaKnown RBP15.25■□□□□ 0.03
CHRNB4-204ENST00000559849 RPS6KA5O75582 802 aa15.25■□□□□ 0.03
CHRNB4-204ENST00000559849 ANP32AP39687 249 aaKnown RBP15.25■□□□□ 0.03
CHRNB4-204ENST00000559849 CCT6AP40227 531 aaKnown RBP15.25■□□□□ 0.03
CHRNB4-204ENST00000559849 DRP2Q13474 957 aa15.25■□□□□ 0.03
CHRNB4-204ENST00000559849 SF3A1Q15459 793 aaKnown RBP15.25■□□□□ 0.03
CHRNB4-204ENST00000559849 ODR4Q5SWX8 454 aa15.25■□□□□ 0.03
CHRNB4-204ENST00000559849 KRT79Q5XKE5 535 aa15.25■□□□□ 0.03
CHRNB4-204ENST00000559849 SPRYD3Q8NCJ5 442 aa15.25■□□□□ 0.03
CHRNB4-204ENST00000559849 CCDC43Q96MW1 224 aaKnown RBP15.25■□□□□ 0.03
CHRNB4-204ENST00000559849 FTHL17Q9BXU8 183 aa15.25■□□□□ 0.03
CHRNB4-204ENST00000559849 PBX4Q9BYU1 374 aa15.25■□□□□ 0.03
CHRNB4-204ENST00000559849 SUCLA2Q9P2R7 463 aaPredicted RBP15.25■□□□□ 0.03
CHRNB4-204ENST00000559849 MSRAQ9UJ68 235 aa15.25■□□□□ 0.03
CHRNB4-204ENST00000559849 CDH23Q9H251 3354 aa15.25■□□□□ 0.03
CHRNB4-204ENST00000559849 DGAT1O75907 488 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 DNAJB2P25686 324 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 RARRES1P49788 294 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 GPC3P51654 580 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 PAK2Q13177 524 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 RAB30Q15771 203 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 HERC6Q8IVU3 1022 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 PPP1R16BQ96T49 567 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 OSMRQ99650 979 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 ADAMTS10Q9H324 1103 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 VWA3AA6NCI4 1184 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 RBAK-RBAKDNI3L0D1 243 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 GPR182O15218 404 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 AMHP03971 560 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 EIF4BP23588 611 aaKnown RBP15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 DEFB103AP81534 67 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 NFX1Q12986 1120 aaKnown RBP15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 SNX29Q8TEQ0 813 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 TMEM40Q8WWA1 233 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 TCP11Q8WWU5 503 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 DBR1Q9UK59 544 aaKnown RBP15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 NOC2LQ9Y3T9 749 aaKnown RBP15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 PCDHA11Q9Y5I1 949 aa15.24■□□□□ 0.03
CHRNB4-204ENST00000559849 A0A087WWV3 80 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 CDC25AP30304 524 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 PBX2P40425 430 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 EMC2Q15006 297 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 FAM173BQ6P4H8 233 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 POTEGQ6S5H5 508 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 RHPN2Q8IUC4 686 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 MYOCDQ8IZQ8 938 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 NLRP7Q8WX94 980 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 SCLT1Q96NL6 688 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 MTRQ99707 1265 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 KIAA1024Q9UPX6 916 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 ARID2Q68CP9 1835 aa15.23■□□□□ 0.03
CHRNB4-204ENST00000559849 TMEM265A0A087WTH1 108 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms