RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 ADGRG1Q9Y653 693 aa19.62■□□□□ 0.73
SNX1-208ENST00000559844 SYNGAP1Q96PV0 1343 aa19.62■□□□□ 0.73
SNX1-208ENST00000559844 CENPFP49454 3210 aa19.62■□□□□ 0.73
SNX1-208ENST00000559844 TTC26A0AVF1 554 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 ADCY3O60266 1144 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 CYP2C19P33261 490 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 TRIM65Q6PJ69 517 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 GLIS3Q8NEA6 775 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 DYDC2Q96IM9 177 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 REEP2Q9BRK0 252 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 BHMT2Q9H2M3 363 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 NDST4Q9H3R1 872 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 ZHX3Q9H4I2 956 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 TBC1D7Q9P0N9 293 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 A0A1W2PQJ5 194 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 IPO5O00410 1097 aaKnown RBP19.61■□□□□ 0.73
SNX1-208ENST00000559844 TBCAO75347 108 aaKnown RBP19.61■□□□□ 0.73
SNX1-208ENST00000559844 EIF3JO75822 258 aaKnown RBP19.61■□□□□ 0.73
SNX1-208ENST00000559844 SLITRK3O94933 977 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 SNAI1O95863 264 aaPredicted RBP19.61■□□□□ 0.73
SNX1-208ENST00000559844 ARP10275 920 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 GAP43P17677 238 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 CACNB1Q02641 598 aaPredicted RBP19.61■□□□□ 0.73
SNX1-208ENST00000559844 MTF1Q14872 753 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 FBXO16Q8IX29 292 aaPredicted RBP19.61■□□□□ 0.73
SNX1-208ENST00000559844 SCFD1Q8WVM8 642 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 EEF2KMTQ96G04 330 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 PCMTD1Q96MG8 357 aaPredicted RBP19.61■□□□□ 0.73
SNX1-208ENST00000559844 RGL1Q9NZL6 768 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 COL4A3BPQ9Y5P4 624 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 PTCH2Q9Y6C5 1203 aa19.61■□□□□ 0.73
SNX1-208ENST00000559844 CHMP2AO43633 222 aa19.6■□□□□ 0.73
SNX1-208ENST00000559844 ITGB5P18084 799 aa19.6■□□□□ 0.73
SNX1-208ENST00000559844 TRIM21P19474 475 aaKnown RBP19.6■□□□□ 0.73
SNX1-208ENST00000559844 CTTNQ14247 550 aaKnown RBP19.6■□□□□ 0.73
SNX1-208ENST00000559844 EDRF1Q3B7T1 1238 aa19.6■□□□□ 0.73
SNX1-208ENST00000559844 B3GNT9Q6UX72 402 aa19.6■□□□□ 0.73
SNX1-208ENST00000559844 TPH2Q8IWU9 490 aa19.6■□□□□ 0.73
SNX1-208ENST00000559844 NACC1Q96RE7 527 aa19.6■□□□□ 0.73
SNX1-208ENST00000559844 DESI2Q9BSY9 194 aa19.6■□□□□ 0.73
SNX1-208ENST00000559844 UNC45AQ9H3U1 944 aa19.6■□□□□ 0.73
SNX1-208ENST00000559844 DNAI1Q9UI46 699 aa19.6■□□□□ 0.73
SNX1-208ENST00000559844 RNF225M0QZC1 329 aaPredicted RBP19.59■□□□□ 0.73
SNX1-208ENST00000559844 STAM2O75886 525 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 ZBED6P86452 979 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 RAD51AP2Q09MP3 1159 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 CTU1Q7Z7A3 348 aaKnown RBP19.59■□□□□ 0.73
SNX1-208ENST00000559844 ZNF397Q8NF99 534 aaPredicted RBP19.59■□□□□ 0.73
SNX1-208ENST00000559844 TTYH3Q9C0H2 523 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 KCTD10Q9H3F6 313 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 KCND2Q9NZV8 630 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 PTPN22Q9Y2R2 807 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 UBIAD1Q9Y5Z9 338 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 DOCK5Q9H7D0 1870 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 RGS20O76081 388 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 IGHA2P01877 340 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 CCDC40Q4G0X9 1142 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 MFSD14CQ5VZR4 134 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 SEPT14Q6ZU15 432 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 SFR1Q86XK3 245 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 NELFCDQ8IXH7 590 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 ZC3H3Q8IXZ2 948 aaKnown RBP19.59■□□□□ 0.73
SNX1-208ENST00000559844 PXYLP1Q8TE99 480 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 INPP4AQ96PE3 977 aaPredicted RBP19.59■□□□□ 0.73
SNX1-208ENST00000559844 L2HGDHQ9H9P8 463 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 JADE2Q9NQC1 790 aa19.59■□□□□ 0.73
SNX1-208ENST00000559844 ZNHIT6Q9NWK9 470 aaKnown RBP19.59■□□□□ 0.73
SNX1-208ENST00000559844 MARSP56192 900 aaKnown RBP19.58■□□□□ 0.73
SNX1-208ENST00000559844 MTMR1Q13613 665 aa19.58■□□□□ 0.73
SNX1-208ENST00000559844 PRAMEF19Q5SWL8 479 aa19.58■□□□□ 0.73
SNX1-208ENST00000559844 RINT1Q6NUQ1 792 aa19.58■□□□□ 0.73
SNX1-208ENST00000559844 EPM2AIP1Q7L775 607 aaPredicted RBP19.58■□□□□ 0.73
SNX1-208ENST00000559844 SLAIN1Q8ND83 568 aa19.58■□□□□ 0.73
SNX1-208ENST00000559844 RUSC1Q9BVN2 902 aa19.58■□□□□ 0.73
SNX1-208ENST00000559844 FGFBP2Q9BYJ0 223 aa19.58■□□□□ 0.73
SNX1-208ENST00000559844 ABHD16BQ9H3Z7 469 aa19.58■□□□□ 0.73
SNX1-208ENST00000559844 ZHX1Q9UKY1 873 aaPredicted RBP19.58■□□□□ 0.73
SNX1-208ENST00000559844 HMGCRP04035 888 aa19.57■□□□□ 0.72
SNX1-208ENST00000559844 TRIM32Q13049 653 aa19.57■□□□□ 0.72
SNX1-208ENST00000559844 GNPTABQ3T906 1256 aa19.57■□□□□ 0.72
SNX1-208ENST00000559844 NLRX1Q86UT6 975 aa19.57■□□□□ 0.72
SNX1-208ENST00000559844 KATNBL1Q9H079 304 aa19.57■□□□□ 0.72
SNX1-208ENST00000559844 VTA1Q9NP79 307 aa19.57■□□□□ 0.72
SNX1-208ENST00000559844 OLFML3Q9NRN5 406 aa19.57■□□□□ 0.72
SNX1-208ENST00000559844 KCNH7Q9NS40 1196 aa19.57■□□□□ 0.72
SNX1-208ENST00000559844 SLU7O95391 586 aaKnown RBP19.57■□□□□ 0.72
SNX1-208ENST00000559844 GRK4P32298 578 aa19.57■□□□□ 0.72
SNX1-208ENST00000559844 ACVR2BQ13705 512 aa19.57■□□□□ 0.72
SNX1-208ENST00000559844 MEA1Q16626 185 aa19.57■□□□□ 0.72
SNX1-208ENST00000559844 KNOP1Q1ED39 458 aaKnown RBP19.57■□□□□ 0.72
SNX1-208ENST00000559844 BMT2Q1RMZ1 405 aa19.57■□□□□ 0.72
SNX1-208ENST00000559844 MTERF4Q7Z6M4 381 aaKnown RBP19.57■□□□□ 0.72
SNX1-208ENST00000559844 MRPL44Q9H9J2 332 aaKnown RBP19.57■□□□□ 0.72
SNX1-208ENST00000559844 TRAF3IP3Q9Y228 551 aa19.57■□□□□ 0.72
SNX1-208ENST00000559844 CETN3O15182 167 aa19.56■□□□□ 0.72
SNX1-208ENST00000559844 CALUO43852 315 aaPredicted RBP19.56■□□□□ 0.72
SNX1-208ENST00000559844 FAM13AO94988 1023 aa19.56■□□□□ 0.72
SNX1-208ENST00000559844 CASQ1P31415 396 aa19.56■□□□□ 0.72
SNX1-208ENST00000559844 GNG11P61952 73 aa19.56■□□□□ 0.72
SNX1-208ENST00000559844 C1orf186Q6ZWK4 172 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms