RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 EMBQ6PCB8 327 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 MIGA2Q7L4E1 593 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 IFT20Q8IY31 132 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 LRRC57Q8N9N7 239 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 OLIG1Q8TAK6 271 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 C7orf43Q8WVR3 580 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 CAVIN3Q969G5 261 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 CCDC43Q96MW1 224 aaKnown RBP10.97□□□□□ -0.65
LRRC28-216ENST00000559819 ZIM3Q96PE6 472 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 PARVGQ9HBI0 331 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 TUFT1Q9NNX1 390 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 CWC15Q9P013 229 aaKnown RBP10.97□□□□□ -0.65
LRRC28-216ENST00000559819 RNF14Q9UBS8 474 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 ZBTB21Q9ULJ3 1066 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 NENFQ9UMX5 172 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 TMX2Q9Y320 296 aa10.97□□□□□ -0.65
LRRC28-216ENST00000559819 CEP104O60308 925 aa10.96□□□□□ -0.65
LRRC28-216ENST00000559819 RPS6KA5O75582 802 aa10.96□□□□□ -0.65
LRRC28-216ENST00000559819 PRKCIP41743 596 aa10.96□□□□□ -0.65
LRRC28-216ENST00000559819 PPP2R5CQ13362 524 aa10.96□□□□□ -0.65
LRRC28-216ENST00000559819 GLE1Q53GS7 698 aaKnown RBP10.96□□□□□ -0.65
LRRC28-216ENST00000559819 RDH13Q8NBN7 331 aa10.96□□□□□ -0.65
LRRC28-216ENST00000559819 TPCN2Q8NHX9 752 aa10.96□□□□□ -0.65
LRRC28-216ENST00000559819 SH3GL2Q99962 352 aa10.96□□□□□ -0.65
LRRC28-216ENST00000559819 ZNF577Q9BSK1 485 aa10.96□□□□□ -0.65
LRRC28-216ENST00000559819 AP1M1Q9BXS5 423 aa10.96□□□□□ -0.65
LRRC28-216ENST00000559819 VEZTQ9HBM0 779 aa10.96□□□□□ -0.65
LRRC28-216ENST00000559819 RSPH14Q9UHP6 348 aa10.96□□□□□ -0.65
LRRC28-216ENST00000559819 SCAF8Q9UPN6 1271 aaKnown RBP10.96□□□□□ -0.65
LRRC28-216ENST00000559819 ZBTB12Q9Y330 459 aaPredicted RBP10.96□□□□□ -0.65
LRRC28-216ENST00000559819 ANKRD65E5RJM6 399 aa10.96□□□□□ -0.66
LRRC28-216ENST00000559819 TRIM66O15016 1216 aa10.96□□□□□ -0.66
LRRC28-216ENST00000559819 EVI5O60447 810 aa10.96□□□□□ -0.66
LRRC28-216ENST00000559819 HSF2BPO75031 334 aa10.96□□□□□ -0.66
LRRC28-216ENST00000559819 PSMC2P35998 433 aaKnown RBP10.96□□□□□ -0.66
LRRC28-216ENST00000559819 SH2D3CQ8N5H7 860 aa10.96□□□□□ -0.66
LRRC28-216ENST00000559819 RANBP17Q9H2T7 1088 aaKnown RBP10.96□□□□□ -0.66
LRRC28-216ENST00000559819 BZW2Q9Y6E2 419 aaKnown RBP10.96□□□□□ -0.66
LRRC28-216ENST00000559819 FRMPD4Q14CM0 1322 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 SPDYE2BA6NHP3 402 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 BTNL10A8MVZ5 291 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 TISP43B9A030 160 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 PLSCR1O15162 318 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 EIF3DO15371 548 aaKnown RBP eCLIP10.95□□□□□ -0.66
LRRC28-216ENST00000559819 FLOT1O75955 427 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 SPDYE6P0CI01 402 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 FMO5P49326 533 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 CEP55Q53EZ4 464 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 KCTD16Q68DU8 428 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 ZNF720Q7Z2F6 126 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 TMEM39BQ9GZU3 492 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 GOPCQ9HD26 462 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 AGPAT3Q9NRZ7 376 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 ZNF70Q9UC06 446 aaPredicted RBP10.95□□□□□ -0.66
LRRC28-216ENST00000559819 DNAJC12Q9UKB3 198 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 RRP15Q9Y3B9 282 aaKnown RBP10.95□□□□□ -0.66
LRRC28-216ENST00000559819 CNTNAP1P78357 1384 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 SHTN1A0MZ66 631 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 KRT14P02533 472 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 IVLP07476 585 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 VIL1P09327 827 aaKnown RBP10.95□□□□□ -0.66
LRRC28-216ENST00000559819 H2AFZP0C0S5 128 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 ZBTB48P10074 688 aaPredicted RBP10.95□□□□□ -0.66
LRRC28-216ENST00000559819 ODR4Q5SWX8 454 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 C10orf76Q5T2E6 689 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 H2AFVQ71UI9 128 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 GLYCTKQ8IVS8 523 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 FAM178BQ8IXR5 827 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 METTL13Q8N6R0 699 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 FLAD1Q8NFF5 587 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 RUFY1Q96T51 708 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 SH2D3AQ9BRG2 576 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 LXNQ9BS40 222 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 OSGEPQ9NPF4 335 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 TMOD2Q9NZR1 351 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 HERC5Q9UII4 1024 aaKnown RBP10.95□□□□□ -0.66
LRRC28-216ENST00000559819 IGSF9BQ9UPX0 1349 aa10.95□□□□□ -0.66
LRRC28-216ENST00000559819 GOLGA8KD6RF30 607 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 F8VZ95 297 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 LRRN2O75325 713 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 STAT1P42224 750 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 GALCP54803 685 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 ERVK-9P63128 1117 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 PAK2Q13177 524 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 DRAP1Q14919 205 aaPredicted RBP10.94□□□□□ -0.66
LRRC28-216ENST00000559819 ARHGAP44Q17R89 818 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 SRLQ86TD4 932 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 LDHDQ86WU2 507 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 DDX42Q86XP3 938 aaKnown RBP eCLIP10.94□□□□□ -0.66
LRRC28-216ENST00000559819 PIK3R5Q8WYR1 880 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 CNKSR1Q969H4 720 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 AGBL1Q96MI9 1066 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 GPR88Q9GZN0 384 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 TMEM59LQ9UK28 342 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 NOC2LQ9Y3T9 749 aaKnown RBP10.94□□□□□ -0.66
LRRC28-216ENST00000559819 HIP1RO75146 1068 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 ITGA4P13612 1032 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 FERP16591 822 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 ABCB4P21439 1286 aa10.94□□□□□ -0.66
LRRC28-216ENST00000559819 SOX5P35711 763 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms