RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 FGRP09769 529 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 PCP11498 1178 aaKnown RBP11.15□□□□□ -0.62
SMAD3-211ENST00000559460 INSRRP14616 1297 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 METAP2P50579 478 aaKnown RBP eCLIP11.15□□□□□ -0.62
SMAD3-211ENST00000559460 GHRHRQ02643 423 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 MARCH8Q5T0T0 291 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 TSHZ3Q63HK5 1081 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 IL31Q6EBC2 164 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 C15orf39Q6ZRI6 1047 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 DGKHQ86XP1 1220 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 VPS52Q8N1B4 723 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 SLC44A3Q8N4M1 653 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 RSAD2Q8WXG1 361 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 ZKSCAN3Q9BRR0 538 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 FOXQ1Q9C009 403 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 CHMP4BQ9H444 224 aaKnown RBP11.15□□□□□ -0.62
SMAD3-211ENST00000559460 RNF41Q9H4P4 317 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-211ENST00000559460 JMJD4Q9H9V9 463 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 CHD6Q8TD26 2715 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 CARNS1A5YM72 827 aa11.14□□□□□ -0.63
SMAD3-211ENST00000559460 OPLAHO14841 1288 aa11.14□□□□□ -0.63
SMAD3-211ENST00000559460 MGEA5O60502 916 aa11.14□□□□□ -0.63
SMAD3-211ENST00000559460 MS4A1P11836 297 aa11.14□□□□□ -0.63
SMAD3-211ENST00000559460 MAGEA9P43362 315 aa11.14□□□□□ -0.63
SMAD3-211ENST00000559460 SPEM2Q0P670 501 aa11.14□□□□□ -0.63
SMAD3-211ENST00000559460 UBXN2BQ14CS0 331 aa11.14□□□□□ -0.63
SMAD3-211ENST00000559460 SLC39A11Q8N1S5 342 aa11.14□□□□□ -0.63
SMAD3-211ENST00000559460 RNF169Q8NCN4 708 aa11.14□□□□□ -0.63
SMAD3-211ENST00000559460 ZBTB10Q96DT7 871 aa11.14□□□□□ -0.63
SMAD3-211ENST00000559460 CDHR1Q96JP9 859 aa11.14□□□□□ -0.63
SMAD3-211ENST00000559460 EMILIN2Q9BXX0 1053 aa11.14□□□□□ -0.63
SMAD3-211ENST00000559460 MRPL9Q9BYD2 267 aaKnown RBP11.14□□□□□ -0.63
SMAD3-211ENST00000559460 PCDHA2Q9Y5H9 948 aa11.14□□□□□ -0.63
SMAD3-211ENST00000559460 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.14□□□□□ -0.63
SMAD3-211ENST00000559460 FNDC1Q4ZHG4 1894 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-211ENST00000559460 USP24Q9UPU5 2620 aa11.14□□□□□ -0.63
SMAD3-211ENST00000559460 FAM208BQ5VWN6 2430 aa11.13□□□□□ -0.63
SMAD3-211ENST00000559460 SMIM35A0A1B0GVV1 85 aa11.13□□□□□ -0.63
SMAD3-211ENST00000559460 ZBTB5O15062 677 aa11.13□□□□□ -0.63
SMAD3-211ENST00000559460 PROS1P07225 676 aa11.13□□□□□ -0.63
SMAD3-211ENST00000559460 ZSCAN20P17040 1043 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-211ENST00000559460 KLRC2P26717 231 aa11.13□□□□□ -0.63
SMAD3-211ENST00000559460 HAND2P61296 217 aa11.13□□□□□ -0.63
SMAD3-211ENST00000559460 MRPS9P82933 396 aaKnown RBP11.13□□□□□ -0.63
SMAD3-211ENST00000559460 HOMER1Q86YM7 354 aa11.13□□□□□ -0.63
SMAD3-211ENST00000559460 PANK1Q8TE04 598 aa11.13□□□□□ -0.63
SMAD3-211ENST00000559460 CASD1Q96PB1 797 aa11.13□□□□□ -0.63
SMAD3-211ENST00000559460 DPP7Q9UHL4 492 aa11.13□□□□□ -0.63
SMAD3-211ENST00000559460 DDX19BQ9UMR2 479 aa11.13□□□□□ -0.63
SMAD3-211ENST00000559460 ST3GAL5Q9UNP4 418 aa11.13□□□□□ -0.63
SMAD3-211ENST00000559460 NOC2LQ9Y3T9 749 aaKnown RBP11.13□□□□□ -0.63
SMAD3-211ENST00000559460 SPTBN2O15020 2390 aa11.13□□□□□ -0.63
SMAD3-211ENST00000559460 FANCMQ8IYD8 2048 aa11.13□□□□□ -0.63
SMAD3-211ENST00000559460 DENND4AQ7Z401 1863 aa11.12□□□□□ -0.63
SMAD3-211ENST00000559460 KANSL1LA0AUZ9 987 aa11.12□□□□□ -0.63
SMAD3-211ENST00000559460 NT5C1B-RDH14C9J2C7 533 aa11.12□□□□□ -0.63
SMAD3-211ENST00000559460 FOXD2O60548 495 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-211ENST00000559460 LRP3O75074 770 aa11.12□□□□□ -0.63
SMAD3-211ENST00000559460 PMLP29590 882 aa11.12□□□□□ -0.63
SMAD3-211ENST00000559460 POLGP54098 1239 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-211ENST00000559460 SHC2P98077 582 aa11.12□□□□□ -0.63
SMAD3-211ENST00000559460 SEMA3FQ13275 785 aa11.12□□□□□ -0.63
SMAD3-211ENST00000559460 PPP2R5DQ14738 602 aa11.12□□□□□ -0.63
SMAD3-211ENST00000559460 LAIR1Q6GTX8 287 aa11.12□□□□□ -0.63
SMAD3-211ENST00000559460 SIRT2Q8IXJ6 389 aa11.12□□□□□ -0.63
SMAD3-211ENST00000559460 MAML2Q8IZL2 1156 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-211ENST00000559460 ZBTB44Q8NCP5 570 aa11.12□□□□□ -0.63
SMAD3-211ENST00000559460 SLC22A17Q8WUG5 538 aa11.12□□□□□ -0.63
SMAD3-211ENST00000559460 AUTS2Q8WXX7 1259 aa11.12□□□□□ -0.63
SMAD3-211ENST00000559460 CUL5Q93034 780 aa11.12□□□□□ -0.63
SMAD3-211ENST00000559460 ZBP1Q9H171 429 aa11.12□□□□□ -0.63
SMAD3-211ENST00000559460 PARD6AQ9NPB6 346 aa11.12□□□□□ -0.63
SMAD3-211ENST00000559460 ZMIZ1Q9ULJ6 1067 aa11.12□□□□□ -0.63
SMAD3-211ENST00000559460 CLUHO75153 1309 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 MYH6P13533 1939 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 NCAM2O15394 837 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 ZC3H11AO75152 810 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMAD3-211ENST00000559460 LRRN2O75325 713 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 CTSAP10619 480 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 GLULP15104 373 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 NT5C2P49902 561 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 BCAR1P56945 870 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 STARD6P59095 220 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 PLCB4Q15147 1175 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 ALX1Q15699 326 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 LPAL2Q16609 132 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 VPS53Q5VIR6 699 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 PRR23BQ6ZRT6 265 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 LRRC55Q6ZSA7 311 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 SMARCC2Q8TAQ2 1214 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 TRAPPC12Q8WVT3 735 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 FAM126AQ9BYI3 521 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-211ENST00000559460 PIDD1Q9HB75 910 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 SLC2A4RGQ9NR83 387 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 EPS15L1Q9UBC2 864 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 TELO2Q9Y4R8 837 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 IRAK3Q9Y616 596 aa11.11□□□□□ -0.63
SMAD3-211ENST00000559460 TTC41PQ6P2S7 1318 aa11.1□□□□□ -0.63
SMAD3-211ENST00000559460 GSTTP1A0A1W2PQM5 241 aa11.1□□□□□ -0.63
SMAD3-211ENST00000559460 KLRF2D3W0D1 207 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms