RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 PPP1R18Q6NYC8 613 aa18.17■□□□□ 0.5
CDC42BPB-203ENST00000558867 MIS18BP1Q6P0N0 1132 aa18.17■□□□□ 0.5
CDC42BPB-203ENST00000558867 UBALD2Q8IYN6 164 aa18.17■□□□□ 0.5
CDC42BPB-203ENST00000558867 ZNF710Q8N1W2 664 aa18.17■□□□□ 0.5
CDC42BPB-203ENST00000558867 FANCBQ8NB91 859 aa18.17■□□□□ 0.5
CDC42BPB-203ENST00000558867 NECTIN4Q96NY8 510 aa18.17■□□□□ 0.5
CDC42BPB-203ENST00000558867 TCF25Q9BQ70 676 aa18.17■□□□□ 0.5
CDC42BPB-203ENST00000558867 AGO4Q9HCK5 861 aaKnown RBP18.17■□□□□ 0.5
CDC42BPB-203ENST00000558867 TCEAL9Q9UHQ7 104 aa18.17■□□□□ 0.5
CDC42BPB-203ENST00000558867 RBM8AQ9Y5S9 174 aaKnown RBP18.17■□□□□ 0.5
CDC42BPB-203ENST00000558867 TAF6LQ9Y6J9 622 aa18.17■□□□□ 0.5
CDC42BPB-203ENST00000558867 PLXNA4Q9HCM2 1894 aa18.17■□□□□ 0.5
CDC42BPB-203ENST00000558867 ZFHX2Q9C0A1 2572 aaPredicted RBP18.17■□□□□ 0.5
CDC42BPB-203ENST00000558867 C9IYK1 514 aa18.16■□□□□ 0.5
CDC42BPB-203ENST00000558867 FSCN2O14926 492 aa18.16■□□□□ 0.5
CDC42BPB-203ENST00000558867 ZSCAN20P17040 1043 aaPredicted RBP18.16■□□□□ 0.5
CDC42BPB-203ENST00000558867 FOXK2Q01167 660 aa18.16■□□□□ 0.5
CDC42BPB-203ENST00000558867 PDXDC2PQ6P474 469 aa18.16■□□□□ 0.5
CDC42BPB-203ENST00000558867 TMTC3Q6ZXV5 915 aa18.16■□□□□ 0.5
CDC42BPB-203ENST00000558867 TMC7Q7Z402 723 aa18.16■□□□□ 0.5
CDC42BPB-203ENST00000558867 CKAP2LQ8IYA6 745 aa18.16■□□□□ 0.5
CDC42BPB-203ENST00000558867 KIAA0319LQ8IZA0 1049 aa18.16■□□□□ 0.5
CDC42BPB-203ENST00000558867 CASP10Q92851 521 aa18.16■□□□□ 0.5
CDC42BPB-203ENST00000558867 ASIC4Q96FT7 647 aa18.16■□□□□ 0.5
CDC42BPB-203ENST00000558867 RIPOR3Q96MK2 946 aa18.16■□□□□ 0.5
CDC42BPB-203ENST00000558867 TMEM117Q9H0C3 514 aa18.16■□□□□ 0.5
CDC42BPB-203ENST00000558867 ZNF302Q9NR11 478 aa18.16■□□□□ 0.5
CDC42BPB-203ENST00000558867 hCG_1642624A0A1W2PR95 340 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 hCG_1984214I3L0E3 225 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 K7ELQ4 463 aaPredicted RBP18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 MEIS1O00470 390 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 MGEA5O60502 916 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 ARP10275 920 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 RXRAP19793 462 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 MCM2P49736 904 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 ADCY7P51828 1080 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 FAM189BP81408 668 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 AP3B2Q13367 1082 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 MTMR3Q13615 1198 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 LLGL2Q6P1M3 1020 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 NIPA1Q7RTP0 329 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 ZNF713Q8N859 430 aaPredicted RBP18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 TMEM87AQ8NBN3 555 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 CYP2W1Q8TAV3 490 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 ZNF558Q96NG5 402 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 S1PR5Q9H228 398 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 RIC8AQ9NPQ8 531 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 RBM28Q9NW13 759 aaKnown RBP18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 CEP131Q9UPN4 1083 aa18.15■□□□□ 0.5
CDC42BPB-203ENST00000558867 FNDC1Q4ZHG4 1894 aaPredicted RBP18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 IGKV6D-21A0A0A0MT36 114 aa18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 TMOD1P28289 359 aa18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 VCPP55072 806 aaKnown RBP18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 ITIH3Q06033 890 aa18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 ITGB3BPQ13352 177 aaPredicted RBP18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 NECTIN1Q15223 517 aa18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 KCNT2Q6UVM3 1135 aa18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 ABHD15Q6UXT9 468 aa18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 LRRC43Q8N309 656 aa18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 METTL13Q8N6R0 699 aa18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 VN1R2Q8NFZ6 395 aa18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 BBXQ8WY36 941 aaPredicted RBP18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 ANO3Q9BYT9 981 aa18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 CWH43Q9H720 699 aa18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 FAM86C1Q9NVL1 165 aa18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 SORCS3Q9UPU3 1222 aa18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 CACNA1HO95180 2353 aa18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 USP34Q70CQ2 3546 aa18.14■□□□□ 0.49
CDC42BPB-203ENST00000558867 CARNS1A5YM72 827 aa18.13■□□□□ 0.49
CDC42BPB-203ENST00000558867 DDX39AO00148 427 aaKnown RBP18.13■□□□□ 0.49
CDC42BPB-203ENST00000558867 MAGEB2O15479 319 aa18.13■□□□□ 0.49
CDC42BPB-203ENST00000558867 FGFR1P11362 822 aa18.13■□□□□ 0.49
CDC42BPB-203ENST00000558867 RBM10P98175 930 aaKnown RBP18.13■□□□□ 0.49
CDC42BPB-203ENST00000558867 SMC1AQ14683 1233 aaKnown RBP18.13■□□□□ 0.49
CDC42BPB-203ENST00000558867 KIZQ2M2Z5 673 aa18.13■□□□□ 0.49
CDC42BPB-203ENST00000558867 TSGA10IPQ3SY00 556 aa18.13■□□□□ 0.49
CDC42BPB-203ENST00000558867 MICU3Q86XE3 530 aa18.13■□□□□ 0.49
CDC42BPB-203ENST00000558867 MAP7D2Q96T17 732 aa18.13■□□□□ 0.49
CDC42BPB-203ENST00000558867 OSMRQ99650 979 aa18.13■□□□□ 0.49
CDC42BPB-203ENST00000558867 APOL5Q9BWW9 433 aa18.13■□□□□ 0.49
CDC42BPB-203ENST00000558867 TM6SF1Q9BZW5 370 aa18.13■□□□□ 0.49
CDC42BPB-203ENST00000558867 CDHR5Q9HBB8 845 aa18.13■□□□□ 0.49
CDC42BPB-203ENST00000558867 SPG21Q9NZD8 308 aa18.13■□□□□ 0.49
CDC42BPB-203ENST00000558867 KMT2EQ8IZD2 1858 aa18.13■□□□□ 0.49
CDC42BPB-203ENST00000558867 SMCO2A6NFE2 343 aa18.12■□□□□ 0.49
CDC42BPB-203ENST00000558867 H0Y858 1186 aa18.12■□□□□ 0.49
CDC42BPB-203ENST00000558867 GALR2O43603 387 aaPredicted RBP18.12■□□□□ 0.49
CDC42BPB-203ENST00000558867 SREBF1P36956 1147 aa18.12■□□□□ 0.49
CDC42BPB-203ENST00000558867 MTHFRP42898 656 aa18.12■□□□□ 0.49
CDC42BPB-203ENST00000558867 APOBRQ0VD83 1088 aa18.12■□□□□ 0.49
CDC42BPB-203ENST00000558867 KCNC3Q14003 757 aa18.12■□□□□ 0.49
CDC42BPB-203ENST00000558867 WWC2Q6AWC2 1192 aa18.12■□□□□ 0.49
CDC42BPB-203ENST00000558867 MCTP2Q6DN12 878 aa18.12■□□□□ 0.49
CDC42BPB-203ENST00000558867 SWSAP1Q6NVH7 229 aa18.12■□□□□ 0.49
CDC42BPB-203ENST00000558867 SYCE2Q6PIF2 218 aa18.12■□□□□ 0.49
CDC42BPB-203ENST00000558867 SGMS1Q86VZ5 419 aa18.12■□□□□ 0.49
CDC42BPB-203ENST00000558867 FAM228AQ86W67 206 aa18.12■□□□□ 0.49
CDC42BPB-203ENST00000558867 PLA2G4DQ86XP0 818 aa18.12■□□□□ 0.49
CDC42BPB-203ENST00000558867 KREMEN2Q8NCW0 462 aa18.12■□□□□ 0.49
CDC42BPB-203ENST00000558867 TMEM40Q8WWA1 233 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms