RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 FOXD4L5Q5VV16 416 aaPredicted RBP15.48■□□□□ 0.07
TSPAN3-205ENST00000558745 CATSPER3Q86XQ3 398 aa15.48■□□□□ 0.07
TSPAN3-205ENST00000558745 NME8Q8N427 588 aa15.48■□□□□ 0.07
TSPAN3-205ENST00000558745 FOXD4L4Q8WXT5 416 aaPredicted RBP15.48■□□□□ 0.07
TSPAN3-205ENST00000558745 SEPT8Q92599 483 aa15.48■□□□□ 0.07
TSPAN3-205ENST00000558745 CEP170P1Q96L14 293 aa15.48■□□□□ 0.07
TSPAN3-205ENST00000558745 OSMRQ99650 979 aa15.48■□□□□ 0.07
TSPAN3-205ENST00000558745 IFIH1Q9BYX4 1025 aaKnown RBP15.48■□□□□ 0.07
TSPAN3-205ENST00000558745 MTIF3Q9H2K0 278 aaKnown RBP15.48■□□□□ 0.07
TSPAN3-205ENST00000558745 CYP26B1Q9NR63 512 aa15.48■□□□□ 0.07
TSPAN3-205ENST00000558745 MTMR6Q9Y217 621 aa15.48■□□□□ 0.07
TSPAN3-205ENST00000558745 AKT3Q9Y243 479 aa15.48■□□□□ 0.07
TSPAN3-205ENST00000558745 YBX2Q9Y2T7 364 aaKnown RBP15.48■□□□□ 0.07
TSPAN3-205ENST00000558745 NOC2LQ9Y3T9 749 aaKnown RBP15.48■□□□□ 0.07
TSPAN3-205ENST00000558745 SIP14410 1827 aa15.48■□□□□ 0.07
TSPAN3-205ENST00000558745 PP2D1A8MPX8 630 aa15.47■□□□□ 0.07
TSPAN3-205ENST00000558745 GPR32O75388 356 aa15.47■□□□□ 0.07
TSPAN3-205ENST00000558745 NLRP11P59045 1033 aaKnown RBP15.47■□□□□ 0.07
TSPAN3-205ENST00000558745 RESTQ13127 1097 aa15.47■□□□□ 0.07
TSPAN3-205ENST00000558745 XKR9Q5GH70 373 aa15.47■□□□□ 0.07
TSPAN3-205ENST00000558745 RTN4RL1Q86UN2 441 aaPredicted RBP15.47■□□□□ 0.07
TSPAN3-205ENST00000558745 KSR1Q8IVT5 923 aa15.47■□□□□ 0.07
TSPAN3-205ENST00000558745 NKX2-4Q9H2Z4 354 aa15.47■□□□□ 0.07
TSPAN3-205ENST00000558745 TTYH1Q9H313 450 aaPredicted RBP15.47■□□□□ 0.07
TSPAN3-205ENST00000558745 LOXHD1Q8IVV2 1947 aa15.47■□□□□ 0.07
TSPAN3-205ENST00000558745 IGKV6-21A0A0C4DH24 114 aa15.46■□□□□ 0.07
TSPAN3-205ENST00000558745 ABHD14A-ACY1A0A1B0GW23 586 aa15.46■□□□□ 0.07
TSPAN3-205ENST00000558745 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.46■□□□□ 0.07
TSPAN3-205ENST00000558745 M0QZ92 97 aa15.46■□□□□ 0.07
TSPAN3-205ENST00000558745 DKC1O60832 514 aaKnown RBP eCLIP15.46■□□□□ 0.07
TSPAN3-205ENST00000558745 MAFO75444 373 aaPredicted RBP15.46■□□□□ 0.07
TSPAN3-205ENST00000558745 CSDE1O75534 798 aaKnown RBP15.46■□□□□ 0.07
TSPAN3-205ENST00000558745 BAIAP3O94812 1187 aa15.46■□□□□ 0.07
TSPAN3-205ENST00000558745 PDCP20941 246 aa15.46■□□□□ 0.07
TSPAN3-205ENST00000558745 DNAJB2P25686 324 aa15.46■□□□□ 0.07
TSPAN3-205ENST00000558745 KCNJ6P48051 423 aa15.46■□□□□ 0.07
TSPAN3-205ENST00000558745 FXR2P51116 673 aaKnown RBP eCLIP15.46■□□□□ 0.07
TSPAN3-205ENST00000558745 TMEM143Q96AN5 459 aa15.46■□□□□ 0.07
TSPAN3-205ENST00000558745 ADAMTS10Q9H324 1103 aa15.46■□□□□ 0.07
TSPAN3-205ENST00000558745 SUCLA2Q9P2R7 463 aaPredicted RBP15.46■□□□□ 0.07
TSPAN3-205ENST00000558745 LRWD1Q9UFC0 647 aa15.46■□□□□ 0.07
TSPAN3-205ENST00000558745 PADI3Q9ULW8 664 aa15.46■□□□□ 0.07
TSPAN3-205ENST00000558745 KDM3AQ9Y4C1 1321 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 ENPP3O14638 875 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 STX6O43752 255 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 ARHGEF15O94989 841 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 UPP2O95045 317 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 COL9A1P20849 921 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 IBSPP21815 317 aaPredicted RBP15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 FGFR4P22455 802 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 TMOD1P28289 359 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 ATP2C1P98194 919 aaPredicted RBP15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 NFX1Q12986 1120 aaKnown RBP15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 POTEGQ6S5H5 508 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 DTHD1Q6ZMT9 781 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 TSHZ1Q6ZSZ6 1077 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 OTUD6AQ7L8S5 288 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 HERC6Q8IVU3 1022 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 MYOCDQ8IZQ8 938 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 TIFAQ96CG3 184 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 MAP7D2Q96T17 732 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 SEMA6BQ9H3T3 888 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 POLD4Q9HCU8 107 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 CLIC4Q9Y696 253 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 LAMA2P24043 3122 aaKnown RBP15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 PTPRSQ13332 1948 aa15.45■□□□□ 0.06
TSPAN3-205ENST00000558745 RPS6KA5O75582 802 aa15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 LYPLA2O95372 231 aa15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 HSP90AA1P07900 732 aaKnown RBP15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 CCT6AP40227 531 aaKnown RBP15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 GPC3P51654 580 aa15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 CRYBB1P53674 252 aaPredicted RBP15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 POLGP54098 1239 aaPredicted RBP15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 CEBPZQ03701 1054 aaKnown RBP15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 GRIN1Q05586 938 aa15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 SF3A1Q15459 793 aaKnown RBP15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 BRAPQ7Z569 592 aa15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 SPRED2Q7Z698 418 aa15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 FAM228AQ86W67 206 aa15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 RHPN2Q8IUC4 686 aa15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 IGSF22Q8N9C0 903 aa15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 LINC01599Q8WXQ3 324 aa15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 SLC9A7Q96T83 725 aa15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 POLR3CQ9BUI4 534 aaPredicted RBP15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 TMX1Q9H3N1 280 aa15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 DHX33Q9H6R0 707 aaKnown RBP15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 TUFT1Q9NNX1 390 aa15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 XPNPEP1Q9NQW7 623 aa15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 ST3GAL5Q9UNP4 418 aa15.44■□□□□ 0.06
TSPAN3-205ENST00000558745 A0A087WZ62 844 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 LCHNA4D1U4 455 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 VWA3AA6NCI4 1184 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 MGEA5O60502 916 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 RPA1P27694 616 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 RARRES1P49788 294 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 PAK2Q13177 524 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 PKP1Q13835 747 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 PDIA5Q14554 519 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 ZRSR1Q15695 479 aaKnown RBP15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 MAEAQ7L5Y9 396 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms