RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 TAF1DQ9H5J8 278 aaPredicted RBP11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 TYW1Q9NV66 732 aaKnown RBP11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 TMCO5BA8MYB1 307 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 DHX15O43143 795 aaKnown RBP11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 KRT13P13646 458 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 EIF4A3P38919 411 aaKnown RBP11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 PRKCEQ02156 737 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 TRIM50Q86XT4 487 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 SLC35F6Q8N357 371 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 RRAGCQ9HB90 399 aa11.85□□□□□ -0.51
CSPG4P5-201ENST00000558731 IQCA1LA6NCM1 817 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 MYCNP04198 464 aaPredicted RBP11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 PSAPP07602 524 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 JAK3P52333 1124 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 SMTNP53814 917 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 DMP1Q13316 513 aaPredicted RBP11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 ELF2Q15723 593 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 EXOC3L4Q17RC7 722 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 LY6KQ17RY6 165 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 OTUD6AQ7L8S5 288 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 HAUS6Q7Z4H7 955 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 CCDC60Q8IWA6 550 aaPredicted RBP11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 FAM212AQ96EL1 285 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 FAM84AQ96KN4 292 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 TCHPQ9BT92 498 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 TXNRD2Q9NNW7 524 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 KMT5AQ9NQR1 393 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 GCNT4Q9P109 453 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 CAPN11Q9UMQ6 739 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 ITIH6Q6UXX5 1313 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 A0A1W2PQC6 194 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 GOLGA6L9A6NEM1 432 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 LRRN2O75325 713 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 GGPS1O95749 300 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 TFRCP02786 760 aaKnown RBP11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 DLATP10515 647 aaKnown RBP11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 OSBPP22059 807 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 Q3C1V9 767 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 FBXO16Q8IX29 292 aaPredicted RBP11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 JAKMIP2Q96AA8 810 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 KCTD10Q9H3F6 313 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 PNMA2Q9UL42 364 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 GLTPD2A6NH11 291 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 HNRNPDLO14979 420 aaKnown RBP11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 SLU7O95391 586 aaKnown RBP11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 GNA14O95837 355 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 AFPP02771 609 aaKnown RBP11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 NCBP1Q09161 790 aaKnown RBP11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 KRT222Q8N1A0 295 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 CAGE1Q8TC20 777 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 GINS2Q9Y248 185 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 IVNS1ABPQ9Y6Y0 642 aa11.84□□□□□ -0.51
CSPG4P5-201ENST00000558731 DENND3A2RUS2 1198 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 CELF2O95319 508 aaKnown RBP11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 GJC2Q5T442 439 aaPredicted RBP11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 SFMBT2Q5VUG0 894 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 MIS18BP1Q6P0N0 1132 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 USP50Q70EL3 339 aaPredicted RBP11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 MMP19Q99542 508 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 CBWD1Q9BRT8 395 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 ANKFY1Q9P2R3 1169 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 PCDHA2Q9Y5H9 948 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 BUB1O43683 1085 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 PSMC2P35998 433 aaKnown RBP11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 PPATQ06203 517 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 GFPT1Q06210 699 aaPredicted RBP11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 EHHADHQ08426 723 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 KLHL30Q0D2K2 578 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 KIF5AQ12840 1032 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 ERCC6LQ2NKX8 1250 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 ZNF720Q7Z2F6 126 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 LRRN4CLQ8ND94 238 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 PPP1R13LQ8WUF5 828 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 UBXN4Q92575 508 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 CEP63Q96MT8 703 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 IFIH1Q9BYX4 1025 aaKnown RBP11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 EPC1Q9H2F5 836 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 AZI2Q9H6S1 392 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 DUSP10Q9Y6W6 482 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 ASTN1O14525 1302 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 CCL15-CCL14A0A0B4J2E2 113 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 RBAK-RBAKDNI3L0D1 243 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 PDXKO00764 312 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 GCLMP48507 274 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 CCL15Q16663 113 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 LBX2Q6XYB7 198 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 METTL13Q8N6R0 699 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 POMGNT1Q8WZA1 660 aa11.83□□□□□ -0.52
CSPG4P5-201ENST00000558731 FRMPD4Q14CM0 1322 aa11.82□□□□□ -0.52
CSPG4P5-201ENST00000558731 BCRP11274 1271 aa11.82□□□□□ -0.52
CSPG4P5-201ENST00000558731 SFNP31947 248 aa11.82□□□□□ -0.52
CSPG4P5-201ENST00000558731 HOXD13P35453 343 aa11.82□□□□□ -0.52
CSPG4P5-201ENST00000558731 ALDH5A1P51649 535 aaPredicted RBP11.82□□□□□ -0.52
CSPG4P5-201ENST00000558731 ANO5Q75V66 913 aa11.82□□□□□ -0.52
CSPG4P5-201ENST00000558731 NEK9Q8TD19 979 aa11.82□□□□□ -0.52
CSPG4P5-201ENST00000558731 COPS5Q92905 334 aa11.82□□□□□ -0.52
CSPG4P5-201ENST00000558731 CDHR1Q96JP9 859 aa11.82□□□□□ -0.52
CSPG4P5-201ENST00000558731 IFT74Q96LB3 600 aa11.82□□□□□ -0.52
CSPG4P5-201ENST00000558731 C12orf42Q96LP6 360 aa11.82□□□□□ -0.52
CSPG4P5-201ENST00000558731 ZNF302Q9NR11 478 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms