RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 APBA2Q99767 749 aa7.37□□□□□ -1.23
ZEB1-211ENST00000558440 PAGR1Q9BTK6 254 aa7.37□□□□□ -1.23
ZEB1-211ENST00000558440 DHX36Q9H2U1 1008 aaKnown RBP7.37□□□□□ -1.23
ZEB1-211ENST00000558440 COPRSQ9NQ92 184 aa7.37□□□□□ -1.23
ZEB1-211ENST00000558440 SMC4Q9NTJ3 1288 aa7.37□□□□□ -1.23
ZEB1-211ENST00000558440 PI4KBQ9UBF8 816 aa7.37□□□□□ -1.23
ZEB1-211ENST00000558440 TPX2Q9ULW0 747 aaKnown RBP7.37□□□□□ -1.23
ZEB1-211ENST00000558440 PEX10O60683 326 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 BAG3O95817 575 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 CST3P01034 146 aaPredicted RBP7.36□□□□□ -1.23
ZEB1-211ENST00000558440 ZNF865P0CJ78 1059 aaPredicted RBP7.36□□□□□ -1.23
ZEB1-211ENST00000558440 RLBP1P12271 317 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 TFE3P19532 575 aaPredicted RBP7.36□□□□□ -1.23
ZEB1-211ENST00000558440 ST13P50502 369 aaKnown RBP7.36□□□□□ -1.23
ZEB1-211ENST00000558440 TFCP2Q12800 502 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 PSMD2Q13200 908 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 IKZF1Q13422 519 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 RRP1BQ14684 758 aaKnown RBP7.36□□□□□ -1.23
ZEB1-211ENST00000558440 CCL14Q16627 93 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 ALDH1L2Q3SY69 923 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 SFRP5Q5T4F7 317 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 PRAMEF13Q5VWM6 474 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 MFSD14CQ5VZR4 134 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 GPR142Q7Z601 462 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 CRACR2BQ8N4Y2 399 aaPredicted RBP7.36□□□□□ -1.23
ZEB1-211ENST00000558440 SPATA5Q8NB90 893 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 ZNF384Q8TF68 577 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 SENP6Q9GZR1 1112 aaPredicted RBP7.36□□□□□ -1.23
ZEB1-211ENST00000558440 MIR1-1HGQ9H1L0 117 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 TXNRD2Q9NNW7 524 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 HMG20BQ9P0W2 317 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 LRP2BPQ9P2M1 347 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 RBPJLQ9UBG7 517 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.36□□□□□ -1.23
ZEB1-211ENST00000558440 PLXNA1Q9UIW2 1896 aa7.36□□□□□ -1.23
ZEB1-211ENST00000558440 ZNF521Q96K83 1311 aa7.35□□□□□ -1.23
ZEB1-211ENST00000558440 PRR33A8MZF0 331 aa7.35□□□□□ -1.23
ZEB1-211ENST00000558440 E9PSI1 815 aa7.35□□□□□ -1.23
ZEB1-211ENST00000558440 MSCO60682 206 aa7.35□□□□□ -1.23
ZEB1-211ENST00000558440 CNGA1P29973 690 aa7.35□□□□□ -1.23
ZEB1-211ENST00000558440 CCNA1P78396 465 aa7.35□□□□□ -1.23
ZEB1-211ENST00000558440 ZP2Q05996 745 aa7.35□□□□□ -1.23
ZEB1-211ENST00000558440 WDR78Q5VTH9 848 aa7.35□□□□□ -1.23
ZEB1-211ENST00000558440 LETMD1Q6P1Q0 360 aa7.35□□□□□ -1.23
ZEB1-211ENST00000558440 MFSD4AQ8N468 514 aa7.35□□□□□ -1.23
ZEB1-211ENST00000558440 SH3RF3Q8TEJ3 882 aaPredicted RBP7.35□□□□□ -1.23
ZEB1-211ENST00000558440 USP6NLQ92738 828 aa7.35□□□□□ -1.23
ZEB1-211ENST00000558440 EDC3Q96F86 508 aaKnown RBP7.35□□□□□ -1.23
ZEB1-211ENST00000558440 NOC4LQ9BVI4 516 aaKnown RBP7.35□□□□□ -1.23
ZEB1-211ENST00000558440 PORCNQ9H237 461 aa7.35□□□□□ -1.23
ZEB1-211ENST00000558440 PRDM7Q9NQW5 492 aa7.35□□□□□ -1.23
ZEB1-211ENST00000558440 GINM1Q9NU53 330 aa7.35□□□□□ -1.23
ZEB1-211ENST00000558440 ZBTB21Q9ULJ3 1066 aa7.35□□□□□ -1.23
ZEB1-211ENST00000558440 NAV1Q8NEY1 1877 aa7.34□□□□□ -1.23
ZEB1-211ENST00000558440 ZNF236Q9UL36 1845 aa7.34□□□□□ -1.23
ZEB1-211ENST00000558440 SRGAP3O43295 1099 aa7.34□□□□□ -1.23
ZEB1-211ENST00000558440 HLA-DOAP06340 250 aa7.34□□□□□ -1.23
ZEB1-211ENST00000558440 UQCRFS1P1P0C7P4 283 aa7.34□□□□□ -1.23
ZEB1-211ENST00000558440 RTP1P59025 263 aa7.34□□□□□ -1.23
ZEB1-211ENST00000558440 NAA16Q6N069 864 aaPredicted RBP7.34□□□□□ -1.23
ZEB1-211ENST00000558440 ZNF746Q6NUN9 644 aaPredicted RBP7.34□□□□□ -1.23
ZEB1-211ENST00000558440 ATF7IPQ6VMQ6 1270 aa7.34□□□□□ -1.23
ZEB1-211ENST00000558440 FOXP4Q8IVH2 680 aaPredicted RBP7.34□□□□□ -1.23
ZEB1-211ENST00000558440 MAPKAPK5Q8IW41 473 aa7.34□□□□□ -1.23
ZEB1-211ENST00000558440 MAFAQ8NHW3 353 aaPredicted RBP7.34□□□□□ -1.23
ZEB1-211ENST00000558440 RIN3Q8TB24 985 aa7.34□□□□□ -1.23
ZEB1-211ENST00000558440 TGFBRAP1Q8WUH2 860 aa7.34□□□□□ -1.23
ZEB1-211ENST00000558440 FAM168AQ92567 244 aa7.34□□□□□ -1.23
ZEB1-211ENST00000558440 LPAR1Q92633 364 aa7.34□□□□□ -1.23
ZEB1-211ENST00000558440 CDX2Q99626 313 aaPredicted RBP7.34□□□□□ -1.23
ZEB1-211ENST00000558440 FEZ1Q99689 392 aa7.34□□□□□ -1.23
ZEB1-211ENST00000558440 API5Q9BZZ5 524 aaKnown RBP7.34□□□□□ -1.23
ZEB1-211ENST00000558440 AATFQ9NY61 560 aaKnown RBP eCLIP7.34□□□□□ -1.23
ZEB1-211ENST00000558440 DDX20Q9UHI6 824 aaKnown RBP7.34□□□□□ -1.23
ZEB1-211ENST00000558440 ATP11BQ9Y2G3 1177 aa7.34□□□□□ -1.23
ZEB1-211ENST00000558440 RABGAP1Q9Y3P9 1069 aa7.34□□□□□ -1.23
ZEB1-211ENST00000558440 CHD9Q3L8U1 2897 aa7.34□□□□□ -1.23
ZEB1-211ENST00000558440 COL11A1P12107 1806 aaPredicted RBP7.34□□□□□ -1.24
ZEB1-211ENST00000558440 FLT1P17948 1338 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 TRANK1O15050 2925 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 REV3LO60673 3130 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 SLC15A5A6NIM6 579 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 KBTBD13C9JR72 458 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 DNM1LO00429 736 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 GNAI3P08754 354 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 CTSHP09668 335 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 MCAMP43121 646 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 ZYXQ15942 572 aaKnown RBP7.33□□□□□ -1.24
ZEB1-211ENST00000558440 TSNAXIP1Q2TAA8 658 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 MRPL41Q8IXM3 137 aaKnown RBP7.33□□□□□ -1.24
ZEB1-211ENST00000558440 ARRDC4Q8NCT1 418 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 HSPA12BQ96MM6 686 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 MEIS3Q99687 375 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 DNAJC18Q9H819 358 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 SEMA3GQ9NS98 782 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 FLRT1Q9NZU1 646 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 LMCD1Q9NZU5 365 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 TJP2Q9UDY2 1190 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 PALD1Q9ULE6 856 aa7.33□□□□□ -1.24
ZEB1-211ENST00000558440 NOB1Q9ULX3 412 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms