RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 PCDHA6Q9UN73 950 aa12.67□□□□□ -0.38
RABGGTA-204ENST00000558376 USP15Q9Y4E8 981 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-204ENST00000558376 PCDHA8Q9Y5H6 950 aa12.67□□□□□ -0.38
RABGGTA-204ENST00000558376 PCDHA2Q9Y5H9 948 aa12.67□□□□□ -0.38
RABGGTA-204ENST00000558376 PRPF40AO75400 957 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-204ENST00000558376 SCG2P13521 617 aa12.66□□□□□ -0.38
RABGGTA-204ENST00000558376 KIF5BP33176 963 aa12.66□□□□□ -0.38
RABGGTA-204ENST00000558376 ZXDAP98168 799 aa12.66□□□□□ -0.38
RABGGTA-204ENST00000558376 RBM10P98175 930 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-204ENST00000558376 CBX2Q14781 532 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-204ENST00000558376 TMEM266Q2M3C6 531 aa12.66□□□□□ -0.38
RABGGTA-204ENST00000558376 CYP2W1Q8TAV3 490 aa12.66□□□□□ -0.38
RABGGTA-204ENST00000558376 PBXIP1Q96AQ6 731 aa12.66□□□□□ -0.38
RABGGTA-204ENST00000558376 LZTS2Q9BRK4 669 aa12.66□□□□□ -0.38
RABGGTA-204ENST00000558376 FTHL17Q9BXU8 183 aa12.66□□□□□ -0.38
RABGGTA-204ENST00000558376 CELF4Q9BZC1 486 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-204ENST00000558376 SEC63Q9UGP8 760 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-204ENST00000558376 KMT2EQ8IZD2 1858 aa12.66□□□□□ -0.38
RABGGTA-204ENST00000558376 IGSF9BQ9UPX0 1349 aa12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 PER2O15055 1255 aa12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 MGEA5O60502 916 aa12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 STAG3L1P0CL83 205 aa12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 IBSPP21815 317 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 DNM1Q05193 864 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 SSRP1Q08945 709 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 VN1R2Q8NFZ6 395 aa12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 PPP2R3CQ969Q6 453 aa12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 CDHR5Q9HBB8 845 aa12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 JPH1Q9HDC5 661 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 V9GY48 417 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 ZFHX2Q9C0A1 2572 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 ARP10275 920 aa12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 IFNAR1P17181 557 aa12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 GNAQP50148 359 aa12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 PAK2Q13177 524 aa12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 TLE6Q9H808 572 aa12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 ERVK-5Q9HDB9 667 aa12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 TFIP11Q9UBB9 837 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 HCSTQ9UBK5 93 aa12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 SLC9A2Q9UBY0 812 aa12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 TRPC6Q9Y210 931 aa12.65□□□□□ -0.38
RABGGTA-204ENST00000558376 KDM3AQ9Y4C1 1321 aa12.64□□□□□ -0.39
RABGGTA-204ENST00000558376 MAFGO15525 162 aa12.64□□□□□ -0.39
RABGGTA-204ENST00000558376 RPLP2P05387 115 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-204ENST00000558376 NCLP19338 710 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-204ENST00000558376 ACTR2P61160 394 aa12.64□□□□□ -0.39
RABGGTA-204ENST00000558376 KRT76Q01546 638 aa12.64□□□□□ -0.39
RABGGTA-204ENST00000558376 FUT2Q10981 343 aa12.64□□□□□ -0.39
RABGGTA-204ENST00000558376 TCF15Q12870 199 aa12.64□□□□□ -0.39
RABGGTA-204ENST00000558376 CPLX2Q6PUV4 134 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-204ENST00000558376 MTHFD1LQ6UB35 978 aa12.64□□□□□ -0.39
RABGGTA-204ENST00000558376 PLPPR4Q7Z2D5 763 aa12.64□□□□□ -0.39
RABGGTA-204ENST00000558376 ATP8B4Q8TF62 1192 aa12.64□□□□□ -0.39
RABGGTA-204ENST00000558376 C8orf76Q96K31 380 aa12.64□□□□□ -0.39
RABGGTA-204ENST00000558376 MXRA8Q9BRK3 442 aa12.64□□□□□ -0.39
RABGGTA-204ENST00000558376 AZI2Q9H6S1 392 aa12.64□□□□□ -0.39
RABGGTA-204ENST00000558376 KCNH7Q9NS40 1196 aa12.64□□□□□ -0.39
RABGGTA-204ENST00000558376 LRFN2Q9ULH4 789 aa12.64□□□□□ -0.39
RABGGTA-204ENST00000558376 PTPRZ1P23471 2315 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-204ENST00000558376 CCDC196A0A1B0GTZ2 297 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 SMIM35A0A1B0GVV1 85 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 SPDYE3A6NKU9 549 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 M0QZ92 97 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 CDKL5O76039 1030 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 SARSP49591 514 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 STAT5BP51692 787 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 ERVFC1P60507 584 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 NFX1Q12986 1120 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 FAM102BQ5T8I3 360 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 FBXO18Q8NFZ0 1043 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 RPGRIP1Q96KN7 1286 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 PHF7Q9BWX1 381 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 LMBRD1Q9NUN5 540 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 NOC2LQ9Y3T9 749 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 NFASCO94856 1347 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 ATG7O95352 703 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 CALM1P0DP23 149 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 CALM2P0DP24 149 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 CALM3P0DP25 149 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 KLRC1P26715 233 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 PTPN5P54829 565 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 ITGB3BPQ13352 177 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 NME8Q8N427 588 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 FBXL6Q8N531 539 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 MICAL1Q8TDZ2 1067 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 TMEM40Q8WWA1 233 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 SUSD6Q92537 303 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 PGBD1Q96JS3 809 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 KCNJ14Q9UNX9 436 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 PCDHB7Q9Y5E2 793 aa12.63□□□□□ -0.39
RABGGTA-204ENST00000558376 TCHHQ07283 1943 aa12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 MYH9P35579 1960 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 TBKBP1A7MCY6 615 aa12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 TRAK2O60296 914 aa12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 RCAN1P53805 252 aa12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 VCPP55072 806 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 CEBPZQ03701 1054 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 RESTQ13127 1097 aa12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 PKN1Q16512 942 aa12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 DUSP6Q16828 381 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms