RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 PANK4Q9NVE7 773 aa5.97□□□□□ -1.45
GABPB1-207ENST00000558335 HOXC10Q9NYD6 342 aa5.97□□□□□ -1.45
GABPB1-207ENST00000558335 KCND2Q9NZV8 630 aa5.97□□□□□ -1.45
GABPB1-207ENST00000558335 PARP2Q9UGN5 583 aa5.97□□□□□ -1.45
GABPB1-207ENST00000558335 GGA1Q9UJY5 639 aa5.97□□□□□ -1.45
GABPB1-207ENST00000558335 PCDHA12Q9UN75 941 aa5.97□□□□□ -1.45
GABPB1-207ENST00000558335 RABL2BQ9UNT1 228 aa5.97□□□□□ -1.45
GABPB1-207ENST00000558335 SIK3Q9Y2K2 1263 aa5.97□□□□□ -1.45
GABPB1-207ENST00000558335 REXO2Q9Y3B8 237 aaKnown RBP5.97□□□□□ -1.45
GABPB1-207ENST00000558335 RABGAP1Q9Y3P9 1069 aa5.97□□□□□ -1.45
GABPB1-207ENST00000558335 MYH7BA7E2Y1 1941 aa5.97□□□□□ -1.45
GABPB1-207ENST00000558335 GAKO14976 1311 aa5.97□□□□□ -1.45
GABPB1-207ENST00000558335 FAM205AQ6ZU69 1335 aa5.97□□□□□ -1.45
GABPB1-207ENST00000558335 ZC3H4Q9UPT8 1303 aaKnown RBP5.97□□□□□ -1.45
GABPB1-207ENST00000558335 CDK5RAP2Q96SN8 1893 aa5.96□□□□□ -1.45
GABPB1-207ENST00000558335 CYP3A7-CYP3A51PA0A087WV96 503 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 CYP2D7A0A087X1C5 515 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 A0A0G2JS52 829 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 MACROD2A1Z1Q3 448 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 TRIM49BA6NDI0 452 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 SPDYE3A6NKU9 549 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 H3BQF6 201 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 PDXKO00764 312 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 EIF3HO15372 352 aaKnown RBP eCLIP5.96□□□□□ -1.46
GABPB1-207ENST00000558335 P4HA2O15460 535 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 TTI1O43156 1089 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 ATMINO43313 823 aaPredicted RBP5.96□□□□□ -1.46
GABPB1-207ENST00000558335 PRPF6O94906 941 aaKnown RBP5.96□□□□□ -1.46
GABPB1-207ENST00000558335 SNHG28P0DPA3 235 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 BCRP11274 1271 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 LMNB1P20700 586 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 CYP3A7P24462 503 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 HOXD10P28358 340 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 PRDX5P30044 214 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 RFC4P35249 363 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 PDE6BP35913 854 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 EIF4A3P38919 411 aaKnown RBP5.96□□□□□ -1.46
GABPB1-207ENST00000558335 SNRPFP62306 86 aaKnown RBP5.96□□□□□ -1.46
GABPB1-207ENST00000558335 KLHL30Q0D2K2 578 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 STK4Q13043 487 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 ALCAMQ13740 583 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 RPS6KA1Q15418 735 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 TRAPPC3LQ5T215 181 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 TYW1BQ6NUM6 668 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 KCNV1Q6PIU1 500 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 KDM7AQ6ZMT4 941 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 SND1Q7KZF4 910 aaKnown RBP eCLIP5.96□□□□□ -1.46
GABPB1-207ENST00000558335 CREG2Q8IUH2 290 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 ZC3H3Q8IXZ2 948 aaKnown RBP5.96□□□□□ -1.46
GABPB1-207ENST00000558335 LRRC43Q8N309 656 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 CNBD1Q8NA66 436 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 MARCH10Q8NA82 808 aaPredicted RBP5.96□□□□□ -1.46
GABPB1-207ENST00000558335 NOA1Q8NC60 698 aaKnown RBP5.96□□□□□ -1.46
GABPB1-207ENST00000558335 SLC17A8Q8NDX2 589 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 CERKQ8TCT0 537 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 ACTRT1Q8TDG2 376 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 SH3RF3Q8TEJ3 882 aaPredicted RBP5.96□□□□□ -1.46
GABPB1-207ENST00000558335 PARD3BQ8TEW8 1205 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 TGFBRAP1Q8WUH2 860 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 CELF1Q92879 486 aaKnown RBP5.96□□□□□ -1.46
GABPB1-207ENST00000558335 ZBTB10Q96DT7 871 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 OTUD5Q96G74 571 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 MPP4Q96JB8 637 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 CAPZA3Q96KX2 299 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 SPAG5Q96R06 1193 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 EPAS1Q99814 870 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 MKNK1Q9BUB5 465 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 MRIQ9BWK5 157 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 YIPF2Q9BWQ6 316 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 PLVAPQ9BX97 442 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 RAB17Q9H0T7 212 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 EHD4Q9H223 541 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 TAOK3Q9H2K8 898 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 TMEM60Q9H2L4 133 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 DHX36Q9H2U1 1008 aaKnown RBP5.96□□□□□ -1.46
GABPB1-207ENST00000558335 CNOT10Q9H9A5 744 aaKnown RBP5.96□□□□□ -1.46
GABPB1-207ENST00000558335 FAM114A2Q9NRY5 505 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 HDAC6Q9UBN7 1215 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 SEL1LQ9UBV2 794 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 ARMCX3Q9UH62 379 aaPredicted RBP5.96□□□□□ -1.46
GABPB1-207ENST00000558335 RASAL2Q9UJF2 1139 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 CROTQ9UKG9 612 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 DNM3Q9UQ16 869 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 MAPK8IP1Q9UQF2 711 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 TTLL3Q9Y4R7 772 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 PCDHGC5Q9Y5F6 944 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 FAM169AQ9Y6X4 670 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 SBF2Q86WG5 1849 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 QSER1Q2KHR3 1735 aa5.96□□□□□ -1.46
GABPB1-207ENST00000558335 ZNF335Q9H4Z2 1342 aaPredicted RBP5.96□□□□□ -1.46
GABPB1-207ENST00000558335 hCG_1642624A0A1W2PR95 340 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 TMEM221A6NGB7 291 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 LRRC53A6NM62 1247 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 LRRIQ3A6PVS8 624 aaPredicted RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 FAM25EA8MYX2 175 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 GCOM1H8Y6P7 765 aaPredicted RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 PGRMC1O00264 195 aaKnown RBP5.95□□□□□ -1.46
GABPB1-207ENST00000558335 ENC1O14682 589 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 NDC80O14777 642 aa5.95□□□□□ -1.46
GABPB1-207ENST00000558335 ZBTB5O15062 677 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms