RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 GPR32O75388 356 aa13.91□□□□□ -0.18
CDC42BPB-202ENST00000558321 DNM2P50570 870 aa13.91□□□□□ -0.18
CDC42BPB-202ENST00000558321 NR5A1Q13285 461 aa13.91□□□□□ -0.18
CDC42BPB-202ENST00000558321 MTERF2Q49AM1 385 aa13.91□□□□□ -0.18
CDC42BPB-202ENST00000558321 FAM43BQ6ZT52 329 aaPredicted RBP13.91□□□□□ -0.18
CDC42BPB-202ENST00000558321 ZNF710Q8N1W2 664 aa13.91□□□□□ -0.18
CDC42BPB-202ENST00000558321 BANK1Q8NDB2 785 aa13.91□□□□□ -0.18
CDC42BPB-202ENST00000558321 TMEM40Q8WWA1 233 aa13.91□□□□□ -0.18
CDC42BPB-202ENST00000558321 LINC01599Q8WXQ3 324 aa13.91□□□□□ -0.18
CDC42BPB-202ENST00000558321 MRPL38Q96DV4 380 aaKnown RBP13.91□□□□□ -0.18
CDC42BPB-202ENST00000558321 ADAM2Q99965 735 aa13.91□□□□□ -0.18
CDC42BPB-202ENST00000558321 TMX1Q9H3N1 280 aa13.91□□□□□ -0.18
CDC42BPB-202ENST00000558321 RWDD3Q9Y3V2 267 aa13.91□□□□□ -0.18
CDC42BPB-202ENST00000558321 CHD7Q9P2D1 2997 aa13.91□□□□□ -0.18
CDC42BPB-202ENST00000558321 JAK2O60674 1132 aa13.9□□□□□ -0.18
CDC42BPB-202ENST00000558321 DKC1O60832 514 aaKnown RBP eCLIP13.9□□□□□ -0.18
CDC42BPB-202ENST00000558321 RB1P06400 928 aa13.9□□□□□ -0.18
CDC42BPB-202ENST00000558321 BMPR1AP36894 532 aa13.9□□□□□ -0.18
CDC42BPB-202ENST00000558321 SARSP49591 514 aaKnown RBP13.9□□□□□ -0.18
CDC42BPB-202ENST00000558321 PSMC5P62195 406 aa13.9□□□□□ -0.18
CDC42BPB-202ENST00000558321 PAN2Q504Q3 1202 aaKnown RBP13.9□□□□□ -0.18
CDC42BPB-202ENST00000558321 SLC24A5Q71RS6 500 aa13.9□□□□□ -0.18
CDC42BPB-202ENST00000558321 NLRP7Q8WX94 980 aa13.9□□□□□ -0.18
CDC42BPB-202ENST00000558321 ZNF689Q96CS4 500 aaPredicted RBP13.9□□□□□ -0.18
CDC42BPB-202ENST00000558321 ZNF668Q96K58 619 aaPredicted RBP13.9□□□□□ -0.18
CDC42BPB-202ENST00000558321 C11orf84Q9BUA3 381 aaPredicted RBP13.9□□□□□ -0.18
CDC42BPB-202ENST00000558321 NIFKQ9BYG3 293 aaKnown RBP13.9□□□□□ -0.18
CDC42BPB-202ENST00000558321 KCNMB3Q9NPA1 279 aa13.9□□□□□ -0.18
CDC42BPB-202ENST00000558321 C1orf112Q9NSG2 853 aa13.9□□□□□ -0.18
CDC42BPB-202ENST00000558321 UNC80Q8N2C7 3258 aa13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 EYSQ5T1H1 3165 aa13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 PRRC2BQ5JSZ5 2229 aaKnown RBP13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 TMEM150BA6NC51 233 aa13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 BTBD18B2RXH4 712 aa13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 EML1O00423 815 aa13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 TBX3O15119 743 aa13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 MGEA5O60502 916 aa13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 MMP1P03956 469 aa13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 ZSCAN20P17040 1043 aaPredicted RBP13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 QARSP47897 775 aaKnown RBP13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 PPP2R5CQ13362 524 aa13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 SAFBQ15424 915 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 TARBP2Q15633 366 aaKnown RBP13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 EARS2Q5JPH6 523 aaKnown RBP13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 SPOUT1Q5T280 376 aaKnown RBP13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 B3GNT9Q6UX72 402 aa13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 FAM228AQ86W67 206 aa13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 CCDC83Q8IWF9 413 aa13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 DIS3L2Q8IYB7 885 aaKnown RBP13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 SLFN12Q8IYM2 578 aa13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 CMTR2Q8IYT2 770 aaKnown RBP13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 ADAMTS19Q8TE59 1207 aa13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 SH2D3AQ9BRG2 576 aa13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 ADAMTS10Q9H324 1103 aa13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 RGS18Q9NS28 235 aa13.89□□□□□ -0.19
CDC42BPB-202ENST00000558321 FAM205CA6NFA0 338 aa13.88□□□□□ -0.19
CDC42BPB-202ENST00000558321 P4HBP07237 508 aaKnown RBP13.88□□□□□ -0.19
CDC42BPB-202ENST00000558321 EIF4BP23588 611 aaKnown RBP13.88□□□□□ -0.19
CDC42BPB-202ENST00000558321 KCNQ1P51787 676 aa13.88□□□□□ -0.19
CDC42BPB-202ENST00000558321 CDC42EP1Q00587 391 aa13.88□□□□□ -0.19
CDC42BPB-202ENST00000558321 NCAPH2Q6IBW4 605 aa13.88□□□□□ -0.19
CDC42BPB-202ENST00000558321 LINC01465Q8N7H1 131 aa13.88□□□□□ -0.19
CDC42BPB-202ENST00000558321 HAS1Q92839 578 aa13.88□□□□□ -0.19
CDC42BPB-202ENST00000558321 CLP1Q92989 425 aaKnown RBP13.88□□□□□ -0.19
CDC42BPB-202ENST00000558321 ZSCAN31Q96LW9 406 aaPredicted RBP13.88□□□□□ -0.19
CDC42BPB-202ENST00000558321 UHRF1Q96T88 793 aaPredicted RBP13.88□□□□□ -0.19
CDC42BPB-202ENST00000558321 JPH2Q9BR39 696 aaPredicted RBP13.88□□□□□ -0.19
CDC42BPB-202ENST00000558321 ATP6V0A4Q9HBG4 840 aa13.88□□□□□ -0.19
CDC42BPB-202ENST00000558321 SUCLA2Q9P2R7 463 aaPredicted RBP13.88□□□□□ -0.19
CDC42BPB-202ENST00000558321 VAV3Q9UKW4 847 aa13.88□□□□□ -0.19
CDC42BPB-202ENST00000558321 MRPL42Q9Y6G3 142 aaKnown RBP13.88□□□□□ -0.19
CDC42BPB-202ENST00000558321 PRUNE2Q8WUY3 3088 aa13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 MYH9P35579 1960 aaKnown RBP13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 C9IYK1 514 aa13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 STBD1O95210 358 aa13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 BMP1P13497 986 aa13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 DARSP14868 501 aaKnown RBP13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 GATMP50440 423 aa13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 GPC3P51654 580 aa13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 GUCY1B3Q02153 619 aa13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 EPHA7Q15375 998 aa13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 CALCRLQ16602 461 aa13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 TIGD5Q53EQ6 642 aa13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 PLA2G4FQ68DD2 849 aa13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 EP400NLQ6ZTU2 488 aa13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 ANO5Q75V66 913 aa13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 CRIPAKQ8N1N5 446 aa13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 CEP170P1Q96L14 293 aa13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 PLVAPQ9BX97 442 aa13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 GCOM2Q9BZD3 368 aaPredicted RBP13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 RC3H2Q9HBD1 1191 aaKnown RBP13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 PCDHA12Q9UN75 941 aa13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 SIP14410 1827 aa13.87□□□□□ -0.19
CDC42BPB-202ENST00000558321 TRANK1O15050 2925 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 CUL9Q8IWT3 2517 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 TBKBP1A7MCY6 615 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 C5orf67F2Z3F1 127 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 TNFRSF10AO00220 468 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 GRM6O15303 877 aa13.86□□□□□ -0.19
CDC42BPB-202ENST00000558321 CSPG5O95196 566 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms