RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 TPH2Q8IWU9 490 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 IFNL3Q8IZI9 196 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 STAG2Q8N3U4 1231 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 SNF8Q96H20 258 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 MXD3Q9BW11 206 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 MLXIPQ9HAP2 919 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 ITIH6Q6UXX5 1313 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 hCG_1642624A0A1W2PR95 340 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 ZNF839A8K0R7 811 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 O00370 1275 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 PDE6AP16499 860 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 INPP5AQ14642 412 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 NECTIN1Q15223 517 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 DARS2Q6PI48 645 aaKnown RBP12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 SPATA5Q8NB90 893 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 COQ7Q99807 217 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 RIOK1Q9BRS2 568 aaKnown RBP12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 BTBD7Q9P203 1132 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 TTLL3Q9Y4R7 772 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 LARGE1O95461 756 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 RAB14P61106 215 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 ZMYM1Q5SVZ6 1142 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 PLD3Q8IV08 490 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 MCUQ8NE86 351 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 PIGOQ8TEQ8 1089 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 RNPC3Q96LT9 517 aaKnown RBP12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 PARVGQ9HBI0 331 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 UBAP1Q9NZ09 502 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 ADA2Q9NZK5 511 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 BIN2Q9UBW5 565 aaPredicted RBP12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 SHROOM2Q13796 1616 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 K7ENM7 598 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 M0R3G1 203 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 SERPINB8P50452 374 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 R3HDM1Q15032 1099 aaKnown RBP12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 TAB3Q8N5C8 712 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 ATP11CQ8NB49 1132 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 RFWD2Q8NHY2 731 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 GJA10Q969M2 543 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 ZIM3Q96PE6 472 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 PRPF18Q99633 342 aaKnown RBP12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 NYXQ9GZU5 481 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 MLXIPLQ9NP71 852 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 KDRP35968 1356 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 RNMTO43148 476 aaKnown RBP12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 FOXO3O43524 673 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 GAS7O60861 476 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 KLHL2O95198 593 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 SEC24CP53992 1094 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 ZBTB18Q99592 522 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 BEGAINQ9BUH8 593 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 KLC2Q9H0B6 622 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 L1RE1Q9UN81 338 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 HNRNPRO43390 633 aaKnown RBP12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 COBLO75128 1261 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 CAND2O75155 1236 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 ATP6V1G2O95670 118 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 ICA1Q05084 483 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 TRIM67Q6ZTA4 783 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 PRPF38AQ8NAV1 312 aaKnown RBP12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 EME1Q96AY2 570 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 CFAP36Q96G28 342 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 FOXP3Q9BZS1 431 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 NDEL1Q9GZM8 345 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 FAM8A1Q9UBU6 413 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 PCDHA4Q9UN74 947 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 SESN1Q9Y6P5 492 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 WDR47O94967 919 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 ANXA13P27216 316 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 CC2D2BQ6DHV5 1058 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 RAPGEF5Q92565 580 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 EEF2KMTQ96G04 330 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 EYA1Q99502 592 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 FAM129AQ9BZQ8 928 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 KLHL25Q9H0H3 589 aa12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 DDX25Q9UHL0 483 aaKnown RBP12.55□□□□□ -0.4
CSPG4P12-201ENST00000558282 ITGA6P23229 1130 aa12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 STX3Q13277 289 aa12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 UBE3CQ15386 1083 aa12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 RIN2Q8WYP3 895 aaPredicted RBP12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 CYP4F11Q9HBI6 524 aa12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 GPR108Q9NPR9 543 aa12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 HESX1Q9UBX0 185 aa12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 C15orf41Q9Y2V0 281 aa12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 PFASO15067 1338 aa12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 MROH5Q6ZUA9 1318 aa12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 CDHR2Q9BYE9 1310 aa12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 MYOM2P54296 1465 aa12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 KYNUQ16719 465 aa12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 PREPLQ4J6C6 727 aaPredicted RBP12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 TLK2Q86UE8 772 aa12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 DDX42Q86XP3 938 aaKnown RBP eCLIP12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 RIBC1Q8N443 379 aaPredicted RBP12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 NSL1Q96IY1 281 aa12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 DNAJC17Q9NVM6 304 aaKnown RBP12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 CAB39Q9Y376 341 aaPredicted RBP12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 PPME1Q9Y570 386 aa12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 TTC26A0AVF1 554 aa12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 FAM47DPA6NHR8 397 aa12.54□□□□□ -0.4
CSPG4P12-201ENST00000558282 WBP4O75554 376 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms