RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 PIK3CDO00329 1044 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 HOXA2O43364 376 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 ATP9AO75110 1047 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 CXCL14O95715 111 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 LMNAP02545 664 aaKnown RBP5.94□□□□□ -1.46
SPG11-208ENST00000558155 KCNA2P16389 499 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 SDSP20132 328 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 PPM1AP35813 382 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 STAT5BP51692 787 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 FAM189BP81408 668 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 APOBRQ0VD83 1088 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 TRDNQ13061 729 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 SMC1AQ14683 1233 aaKnown RBP5.94□□□□□ -1.46
SPG11-208ENST00000558155 GRM4Q14833 912 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 ANGPT1Q15389 498 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 SEC23AQ15436 765 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 TMEM266Q2M3C6 531 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 USP17L6PQ6QN14 398 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 MTHFD1LQ6UB35 978 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 KCNT2Q6UVM3 1135 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 THSD4Q6ZMP0 1018 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 PLPPR4Q7Z2D5 763 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 MRPL43Q8N983 215 aaKnown RBP5.94□□□□□ -1.46
SPG11-208ENST00000558155 TDRD5Q8NAT2 981 aaKnown RBP5.94□□□□□ -1.46
SPG11-208ENST00000558155 DTWD2Q8NBA8 298 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 ACSF2Q96CM8 615 aaPredicted RBP5.94□□□□□ -1.46
SPG11-208ENST00000558155 DSCC1Q9BVC3 393 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 TMEM117Q9H0C3 514 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 POMKQ9H5K3 350 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 CWH43Q9H720 699 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 ELAC1Q9H777 363 aaKnown RBP5.94□□□□□ -1.46
SPG11-208ENST00000558155 ERVK-5Q9HDB9 667 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 CYP26B1Q9NR63 512 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 TMEM161AQ9NX61 479 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 SPG21Q9NZD8 308 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 DBR1Q9UK59 544 aaKnown RBP5.94□□□□□ -1.46
SPG11-208ENST00000558155 FBXL21Q9UKT6 434 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 GINS2Q9Y248 185 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 USTQ9Y2C2 406 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 PCDHB15Q9Y5E8 787 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 SALL3Q9BXA9 1300 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 SPTBN4Q9H254 2564 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 EVPLQ92817 2033 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 C2orf71A6NGG8 1288 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 HIP1O00291 1037 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 IFIT3O14879 490 aaKnown RBP5.93□□□□□ -1.46
SPG11-208ENST00000558155 PI15O43692 258 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 CYTH3O43739 400 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 CLASP2O75122 1294 aaKnown RBP5.93□□□□□ -1.46
SPG11-208ENST00000558155 EOMESO95936 686 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 ASGR2P07307 311 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 ZSCAN20P17040 1043 aaPredicted RBP5.93□□□□□ -1.46
SPG11-208ENST00000558155 AOC1P19801 751 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 KLRC1P26715 233 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 SMARCA1P28370 1054 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 CA8P35219 290 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 SLC26A2P50443 739 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 CRYBB1P53674 252 aaPredicted RBP5.93□□□□□ -1.46
SPG11-208ENST00000558155 TDGQ13569 410 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 MTMR1Q13613 665 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 GIT2Q14161 759 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 PLCB4Q15147 1175 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 CWC27Q6UX04 472 aaKnown RBP5.93□□□□□ -1.46
SPG11-208ENST00000558155 OTOP3Q7RTS5 596 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 CATIPQ7Z7H3 387 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 CCDC105Q8IYK2 499 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 ABI1Q8IZP0 508 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 PIBF1Q8WXW3 757 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 RMDN1Q96DB5 314 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 RRP36Q96EU6 259 aaKnown RBP5.93□□□□□ -1.46
SPG11-208ENST00000558155 ZNF558Q96NG5 402 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 SDF4Q9BRK5 362 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 IRX2Q9BZI1 471 aaPredicted RBP5.93□□□□□ -1.46
SPG11-208ENST00000558155 PSTPIP2Q9H939 334 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 JADE2Q9NQC1 790 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 DIAPH3Q9NSV4 1193 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 DZANK1Q9NVP4 752 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 PKD2L1Q9P0L9 805 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 SLC9A2Q9UBY0 812 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 ST3GAL5Q9UNP4 418 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 NOC2LQ9Y3T9 749 aaKnown RBP5.93□□□□□ -1.46
SPG11-208ENST00000558155 HCFC2Q9Y5Z7 792 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 UBIAD1Q9Y5Z9 338 aa5.93□□□□□ -1.46
SPG11-208ENST00000558155 MED19A0JLT2 244 aaPredicted RBP5.92□□□□□ -1.46
SPG11-208ENST00000558155 CARNS1A5YM72 827 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 SPDYE3A6NKU9 549 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 MEIS2O14770 477 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 HBP1O60381 514 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 MGEA5O60502 916 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 FGFR1P11362 822 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 NPR3P17342 541 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 ITGB5P18084 799 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 SDHBP21912 280 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 RFX1P22670 979 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 PDE4AP27815 886 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 ALDH7A1P49419 539 aaKnown RBP5.92□□□□□ -1.46
SPG11-208ENST00000558155 GNAQP50148 359 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 WTAPQ15007 396 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 SART3Q15020 963 aaKnown RBP5.92□□□□□ -1.46
SPG11-208ENST00000558155 NONOQ15233 471 aaKnown RBP eCLIP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms