RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 KIFAP3Q92845 792 aa18.69■□□□□ 0.58
SNX1-203ENST00000558040 DNAJC25Q9H1X3 360 aa18.69■□□□□ 0.58
SNX1-203ENST00000558040 PARVGQ9HBI0 331 aa18.69■□□□□ 0.58
SNX1-203ENST00000558040 GAS2O43903 313 aaKnown RBP18.68■□□□□ 0.58
SNX1-203ENST00000558040 PGK1P00558 417 aa18.68■□□□□ 0.58
SNX1-203ENST00000558040 HSPA1AP0DMV8 641 aaKnown RBP18.68■□□□□ 0.58
SNX1-203ENST00000558040 HSPA1BP0DMV9 641 aaKnown RBP18.68■□□□□ 0.58
SNX1-203ENST00000558040 BMP6P22004 513 aa18.68■□□□□ 0.58
SNX1-203ENST00000558040 CST5P28325 142 aaPredicted RBP18.68■□□□□ 0.58
SNX1-203ENST00000558040 ZNF131P52739 623 aa18.68■□□□□ 0.58
SNX1-203ENST00000558040 EHHADHQ08426 723 aa18.68■□□□□ 0.58
SNX1-203ENST00000558040 EMC2Q15006 297 aa18.68■□□□□ 0.58
SNX1-203ENST00000558040 FAM102BQ5T8I3 360 aa18.68■□□□□ 0.58
SNX1-203ENST00000558040 RNPEPQ9H4A4 650 aa18.68■□□□□ 0.58
SNX1-203ENST00000558040 DHX33Q9H6R0 707 aaKnown RBP18.68■□□□□ 0.58
SNX1-203ENST00000558040 LARSQ9P2J5 1176 aaKnown RBP18.68■□□□□ 0.58
SNX1-203ENST00000558040 RSPH10B2B2RC85 870 aa18.67■□□□□ 0.58
SNX1-203ENST00000558040 ADAMTS4O75173 837 aa18.67■□□□□ 0.58
SNX1-203ENST00000558040 KIF20AO95235 890 aa18.67■□□□□ 0.58
SNX1-203ENST00000558040 RSPH10BP0C881 870 aa18.67■□□□□ 0.58
SNX1-203ENST00000558040 ZNF165P49910 485 aa18.67■□□□□ 0.58
SNX1-203ENST00000558040 PURAQ00577 322 aaKnown RBP18.67■□□□□ 0.58
SNX1-203ENST00000558040 GSE1Q14687 1217 aa18.67■□□□□ 0.58
SNX1-203ENST00000558040 MFSD10Q14728 455 aa18.67■□□□□ 0.58
SNX1-203ENST00000558040 C11orf57Q6ZUT1 292 aaPredicted RBP18.67■□□□□ 0.58
SNX1-203ENST00000558040 MAEAQ7L5Y9 396 aa18.67■□□□□ 0.58
SNX1-203ENST00000558040 RNF180Q86T96 592 aa18.67■□□□□ 0.58
SNX1-203ENST00000558040 SFR1Q86XK3 245 aa18.67■□□□□ 0.58
SNX1-203ENST00000558040 MYCT1Q8N699 235 aa18.67■□□□□ 0.58
SNX1-203ENST00000558040 PCSK9Q8NBP7 692 aaKnown RBP18.67■□□□□ 0.58
SNX1-203ENST00000558040 FAM200AQ8TCP9 573 aa18.67■□□□□ 0.58
SNX1-203ENST00000558040 SH3TC2Q8TF17 1288 aa18.67■□□□□ 0.58
SNX1-203ENST00000558040 MTG1Q9BT17 334 aaPredicted RBP18.67■□□□□ 0.58
SNX1-203ENST00000558040 C17orf75Q9HAS0 396 aa18.67■□□□□ 0.58
SNX1-203ENST00000558040 PDLIM7Q9NR12 457 aa18.67■□□□□ 0.58
SNX1-203ENST00000558040 OLFML3Q9NRN5 406 aa18.67■□□□□ 0.58
SNX1-203ENST00000558040 GDAQ9Y2T3 454 aa18.67■□□□□ 0.58
SNX1-203ENST00000558040 MYADML2A6NDP7 307 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 RRN3P2A6NIE6 340 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 MAGEB2O15479 319 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 MAFO75444 373 aaPredicted RBP18.66■□□□□ 0.58
SNX1-203ENST00000558040 PLS3P13797 630 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 INSRRP14616 1297 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 PSEN2P49810 448 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 RTP1P59025 263 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 PPFIA1Q13136 1202 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 MAPK7Q13164 816 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 PKN2Q16513 984 aaKnown RBP18.66■□□□□ 0.58
SNX1-203ENST00000558040 KIAA0753Q2KHM9 967 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 COBLL1Q53SF7 1204 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 ODR4Q5SWX8 454 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 STXBP4Q6ZWJ1 553 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 GAS2L3Q86XJ1 694 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 SLC17A8Q8NDX2 589 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 TCP11Q8WWU5 503 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 CEP89Q96ST8 783 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 BPIFA3Q9BQP9 254 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.66■□□□□ 0.58
SNX1-203ENST00000558040 SLC39A2Q9NP94 309 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 KCNG1Q9UIX4 513 aa18.66■□□□□ 0.58
SNX1-203ENST00000558040 ZBTB42B2RXF5 422 aa18.65■□□□□ 0.58
SNX1-203ENST00000558040 HAS3O00219 553 aa18.65■□□□□ 0.58
SNX1-203ENST00000558040 ERCC5P28715 1186 aaPredicted RBP18.65■□□□□ 0.58
SNX1-203ENST00000558040 LBX1P52954 281 aa18.65■□□□□ 0.58
SNX1-203ENST00000558040 IRX5P78411 483 aaPredicted RBP18.65■□□□□ 0.58
SNX1-203ENST00000558040 STK4Q13043 487 aa18.65■□□□□ 0.58
SNX1-203ENST00000558040 DMP1Q13316 513 aaPredicted RBP18.65■□□□□ 0.58
SNX1-203ENST00000558040 FAM178BQ8IXR5 827 aa18.65■□□□□ 0.58
SNX1-203ENST00000558040 SMYD4Q8IYR2 804 aaPredicted RBP18.65■□□□□ 0.58
SNX1-203ENST00000558040 DAW1Q8N136 415 aa18.65■□□□□ 0.58
SNX1-203ENST00000558040 RETREG2Q8NC44 543 aa18.65■□□□□ 0.58
SNX1-203ENST00000558040 KLHDC9Q8NEP7 349 aa18.65■□□□□ 0.58
SNX1-203ENST00000558040 KAT2BQ92831 832 aa18.65■□□□□ 0.58
SNX1-203ENST00000558040 IFT74Q96LB3 600 aa18.65■□□□□ 0.58
SNX1-203ENST00000558040 MRPL44Q9H9J2 332 aaKnown RBP18.65■□□□□ 0.58
SNX1-203ENST00000558040 XPNPEP1Q9NQW7 623 aa18.65■□□□□ 0.58
SNX1-203ENST00000558040 GOLGA6L3A6NEY3 463 aa18.64■□□□□ 0.57
SNX1-203ENST00000558040 SFI1A8K8P3 1242 aa18.64■□□□□ 0.57
SNX1-203ENST00000558040 PSMA7O14818 248 aa18.64■□□□□ 0.57
SNX1-203ENST00000558040 MAPTP10636 758 aaKnown RBP18.64■□□□□ 0.57
SNX1-203ENST00000558040 PRCPP42785 496 aa18.64■□□□□ 0.57
SNX1-203ENST00000558040 SMTNP53814 917 aa18.64■□□□□ 0.57
SNX1-203ENST00000558040 IGBP1P78318 339 aa18.64■□□□□ 0.57
SNX1-203ENST00000558040 ALCAMQ13740 583 aa18.64■□□□□ 0.57
SNX1-203ENST00000558040 PPP2R5AQ15172 486 aa18.64■□□□□ 0.57
SNX1-203ENST00000558040 GRIK4Q16099 956 aa18.64■□□□□ 0.57
SNX1-203ENST00000558040 FBXO46Q6PJ61 603 aaPredicted RBP18.64■□□□□ 0.57
SNX1-203ENST00000558040 ADSSL1Q8N142 457 aa18.64■□□□□ 0.57
SNX1-203ENST00000558040 KIAA0895Q8NCT3 520 aa18.64■□□□□ 0.57
SNX1-203ENST00000558040 HPS3Q969F9 1004 aa18.64■□□□□ 0.57
SNX1-203ENST00000558040 POLR3FQ9H1D9 316 aaPredicted RBP18.64■□□□□ 0.57
SNX1-203ENST00000558040 GPRC5CQ9NQ84 441 aa18.64■□□□□ 0.57
SNX1-203ENST00000558040 TBC1D7Q9P0N9 293 aa18.64■□□□□ 0.57
SNX1-203ENST00000558040 PCDHA2Q9Y5H9 948 aa18.64■□□□□ 0.57
SNX1-203ENST00000558040 NRCAMQ92823 1304 aa18.64■□□□□ 0.57
SNX1-203ENST00000558040 IGKV6-21A0A0C4DH24 114 aa18.63■□□□□ 0.57
SNX1-203ENST00000558040 BECN2A8MW95 431 aa18.63■□□□□ 0.57
SNX1-203ENST00000558040 PPP1R3GB7ZBB8 358 aa18.63■□□□□ 0.57
SNX1-203ENST00000558040 MYCNP04198 464 aaPredicted RBP18.63■□□□□ 0.57
SNX1-203ENST00000558040 SMIM10L2AP0DMW4 78 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms