RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 TEX13BQ9BXU2 312 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 CNTNAP3Q9BZ76 1288 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 NT5C3AQ9H0P0 336 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 R3HDMLQ9H3Y0 253 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 AGO4Q9HCK5 861 aaKnown RBP8.22□□□□□ -1.09
SPG11-204ENST00000557866 A1CFQ9NQ94 594 aaKnown RBP8.22□□□□□ -1.09
SPG11-204ENST00000557866 EXOC1Q9NV70 894 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 CYP39A1Q9NYL5 469 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 ZKSCAN5Q9Y2L8 839 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 RABGAP1Q9Y3P9 1069 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 SYNRGQ9UMZ2 1314 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 TRIM49BA6NDI0 452 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 IPO5O00410 1097 aaKnown RBP8.21□□□□□ -1.1
SPG11-204ENST00000557866 CHMP2AO43633 222 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 GAS7O60861 476 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 SCTRP47872 440 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 UBASH3AP57075 661 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 CYP4A11Q02928 519 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 FSTL1Q12841 308 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 COASYQ13057 564 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 CLN3Q13286 438 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 CTTNQ14247 550 aaKnown RBP8.21□□□□□ -1.1
SPG11-204ENST00000557866 EPHA7Q15375 998 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 PTPN21Q16825 1174 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 COBLL1Q53SF7 1204 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 ARHGEF16Q5VV41 709 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 HAUS3Q68CZ6 603 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 TTI2Q6NXR4 508 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 VSIG10LQ86VR7 867 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 GPBP1Q86WP2 473 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 IRF2BP1Q8IU81 584 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 DRC7Q8IY82 874 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 FAM43AQ8N2R8 423 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 SYT2Q8N9I0 419 aaPredicted RBP8.21□□□□□ -1.1
SPG11-204ENST00000557866 GLIS3Q8NEA6 775 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 ERMNQ8TAM6 284 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 DYDC2Q96IM9 177 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 RIT2Q99578 217 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 DUSP9Q99956 384 aaKnown RBP8.21□□□□□ -1.1
SPG11-204ENST00000557866 TEKT3Q9BXF9 490 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 FGFBP2Q9BYJ0 223 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 ASCC2Q9H1I8 757 aaPredicted RBP8.21□□□□□ -1.1
SPG11-204ENST00000557866 BCAS3Q9H6U6 928 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 ACAD9Q9H845 621 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 RRAGCQ9HB90 399 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 SLC39A2Q9NP94 309 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 KCNH7Q9NS40 1196 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 WRAP73Q9P2S5 460 aaPredicted RBP8.21□□□□□ -1.1
SPG11-204ENST00000557866 AGTPBP1Q9UPW5 1226 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 PCDHA2Q9Y5H9 948 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 ASTN1O14525 1302 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 RLFQ13129 1914 aa8.21□□□□□ -1.1
SPG11-204ENST00000557866 POLR2AP24928 1970 aaKnown RBP8.21□□□□□ -1.1
SPG11-204ENST00000557866 FRMD3A2A2Y4 597 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 ZBTB39O15060 712 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 ATP9AO75110 1047 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 EYA4O95677 639 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 SERPINC1P01008 464 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 GNRH1P01148 92 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 SSBP05455 408 aaKnown RBP eCLIP8.2□□□□□ -1.1
SPG11-204ENST00000557866 MYCLP12524 364 aaPredicted RBP8.2□□□□□ -1.1
SPG11-204ENST00000557866 PRKCSHP14314 528 aaPredicted RBP8.2□□□□□ -1.1
SPG11-204ENST00000557866 HERVK_113P62684 666 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 KRT76Q01546 638 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 LRMPQ12912 555 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 PABPC4Q13310 644 aaKnown RBP eCLIP8.2□□□□□ -1.1
SPG11-204ENST00000557866 GIT2Q14161 759 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 PLS1Q14651 629 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 NR1I3Q14994 352 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 TMC6Q7Z403 805 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 RIOX2Q8IUF8 465 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 TPH2Q8IWU9 490 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 CHST13Q8NET6 341 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 CACTINQ8WUQ7 758 aaKnown RBP8.2□□□□□ -1.1
SPG11-204ENST00000557866 DHTKD1Q96HY7 919 aaPredicted RBP8.2□□□□□ -1.1
SPG11-204ENST00000557866 RUSC1Q9BVN2 902 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 SPATC1LQ9H0A9 340 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 SEMA6BQ9H3T3 888 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 TXNRD2Q9NNW7 524 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 TUFT1Q9NNX1 390 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 PYCARDQ9ULZ3 195 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 DNM3Q9UQ16 869 aa8.2□□□□□ -1.1
SPG11-204ENST00000557866 A0A1B0GTH6 734 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 LRRC10BA6NIK2 292 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 GOLGA6L6A8MZA4 724 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 DDX39AO00148 427 aaKnown RBP8.19□□□□□ -1.1
SPG11-204ENST00000557866 TEX33O43247 280 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 CBFA2T2O43439 604 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 CCNE2O96020 404 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 MYCP01106 439 aaPredicted RBP8.19□□□□□ -1.1
SPG11-204ENST00000557866 TPM3P06753 285 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 IDEP14735 1019 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 RHOQP17081 205 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 CDK11BP21127 795 aaKnown RBP8.19□□□□□ -1.1
SPG11-204ENST00000557866 CCNE1P24864 410 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 CCND2P30279 289 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 IRX3P78415 501 aaPredicted RBP8.19□□□□□ -1.1
SPG11-204ENST00000557866 CNTN2Q02246 1040 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 IRF5Q13568 498 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 MTMR1Q13613 665 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms