RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 SLC5A5Q92911 643 aa16.52■□□□□ 0.24
SHMT2-235ENST00000557740 P2RX5Q93086 422 aa16.52■□□□□ 0.24
SHMT2-235ENST00000557740 PPP2R3CQ969Q6 453 aa16.52■□□□□ 0.24
SHMT2-235ENST00000557740 SCLT1Q96NL6 688 aa16.52■□□□□ 0.24
SHMT2-235ENST00000557740 UNC45AQ9H3U1 944 aa16.52■□□□□ 0.24
SHMT2-235ENST00000557740 NRBP2Q9NSY0 501 aa16.52■□□□□ 0.24
SHMT2-235ENST00000557740 MYO7AQ13402 2215 aa16.51■□□□□ 0.23
SHMT2-235ENST00000557740 CDKL5O76039 1030 aa16.51■□□□□ 0.23
SHMT2-235ENST00000557740 ITGB1P05556 798 aa16.51■□□□□ 0.23
SHMT2-235ENST00000557740 Q4G0T1 1027 aa16.51■□□□□ 0.23
SHMT2-235ENST00000557740 SPOUT1Q5T280 376 aaKnown RBP16.51■□□□□ 0.23
SHMT2-235ENST00000557740 GALNT17Q6IS24 598 aa16.51■□□□□ 0.23
SHMT2-235ENST00000557740 EFCAB12Q6NXP0 572 aa16.51■□□□□ 0.23
SHMT2-235ENST00000557740 SLC24A5Q71RS6 500 aa16.51■□□□□ 0.23
SHMT2-235ENST00000557740 MIER3Q7Z3K6 550 aa16.51■□□□□ 0.23
SHMT2-235ENST00000557740 FAM228AQ86W67 206 aa16.51■□□□□ 0.23
SHMT2-235ENST00000557740 FAM178BQ8IXR5 827 aa16.51■□□□□ 0.23
SHMT2-235ENST00000557740 RGS18Q9NS28 235 aa16.51■□□□□ 0.23
SHMT2-235ENST00000557740 PLAGL2Q9UPG8 496 aa16.51■□□□□ 0.23
SHMT2-235ENST00000557740 GRXCR2A6NFK2 248 aa16.5■□□□□ 0.23
SHMT2-235ENST00000557740 TBKBP1A7MCY6 615 aa16.5■□□□□ 0.23
SHMT2-235ENST00000557740 ZNF862O60290 1169 aa16.5■□□□□ 0.23
SHMT2-235ENST00000557740 GPR32O75388 356 aa16.5■□□□□ 0.23
SHMT2-235ENST00000557740 TDP2O95551 362 aa16.5■□□□□ 0.23
SHMT2-235ENST00000557740 TBC1D8BQ0IIM8 1120 aa16.5■□□□□ 0.23
SHMT2-235ENST00000557740 HYAL1Q12794 435 aa16.5■□□□□ 0.23
SHMT2-235ENST00000557740 NONOQ15233 471 aaKnown RBP eCLIP16.5■□□□□ 0.23
SHMT2-235ENST00000557740 UGCGQ16739 394 aa16.5■□□□□ 0.23
SHMT2-235ENST00000557740 KRT25Q7Z3Z0 450 aa16.5■□□□□ 0.23
SHMT2-235ENST00000557740 GJD3Q8N144 294 aa16.5■□□□□ 0.23
SHMT2-235ENST00000557740 ZNF710Q8N1W2 664 aa16.5■□□□□ 0.23
SHMT2-235ENST00000557740 LRRC71Q8N4P6 559 aa16.5■□□□□ 0.23
SHMT2-235ENST00000557740 KLHL23Q8NBE8 558 aa16.5■□□□□ 0.23
SHMT2-235ENST00000557740 RDM1Q8NG50 284 aa16.5■□□□□ 0.23
SHMT2-235ENST00000557740 GJA10Q969M2 543 aa16.5■□□□□ 0.23
SHMT2-235ENST00000557740 IGFLR1Q9H665 355 aa16.5■□□□□ 0.23
SHMT2-235ENST00000557740 EPHX3Q9H6B9 360 aa16.5■□□□□ 0.23
SHMT2-235ENST00000557740 AAASQ9NRG9 546 aa16.5■□□□□ 0.23
SHMT2-235ENST00000557740 C9IYK1 514 aa16.49■□□□□ 0.23
SHMT2-235ENST00000557740 EDIL3O43854 480 aa16.49■□□□□ 0.23
SHMT2-235ENST00000557740 PSMD10O75832 226 aa16.49■□□□□ 0.23
SHMT2-235ENST00000557740 NLRP11P59045 1033 aaKnown RBP16.49■□□□□ 0.23
SHMT2-235ENST00000557740 LINC01465Q8N7H1 131 aa16.49■□□□□ 0.23
SHMT2-235ENST00000557740 AIFM3Q96NN9 605 aa16.49■□□□□ 0.23
SHMT2-235ENST00000557740 SLKQ9H2G2 1235 aaPredicted RBP16.49■□□□□ 0.23
SHMT2-235ENST00000557740 ATP6V0A4Q9HBG4 840 aa16.49■□□□□ 0.23
SHMT2-235ENST00000557740 TMEM161AQ9NX61 479 aa16.49■□□□□ 0.23
SHMT2-235ENST00000557740 SEPT9Q9UHD8 586 aaPredicted RBP16.49■□□□□ 0.23
SHMT2-235ENST00000557740 PCDHB12Q9Y5F1 795 aa16.49■□□□□ 0.23
SHMT2-235ENST00000557740 CYP3A7-CYP3A51PA0A087WV96 503 aa16.48■□□□□ 0.23
SHMT2-235ENST00000557740 CCDC194A0A1B0GVG4 234 aa16.48■□□□□ 0.23
SHMT2-235ENST00000557740 XBP1P17861 261 aa16.48■□□□□ 0.23
SHMT2-235ENST00000557740 CYP3A7P24462 503 aa16.48■□□□□ 0.23
SHMT2-235ENST00000557740 CLUL1Q15846 466 aa16.48■□□□□ 0.23
SHMT2-235ENST00000557740 INF2Q27J81 1249 aa16.48■□□□□ 0.23
SHMT2-235ENST00000557740 TMEM31Q5JXX7 168 aa16.48■□□□□ 0.23
SHMT2-235ENST00000557740 MOXD1Q6UVY6 613 aa16.48■□□□□ 0.23
SHMT2-235ENST00000557740 SPPL3Q8TCT6 385 aa16.48■□□□□ 0.23
SHMT2-235ENST00000557740 POF1BQ8WVV4 589 aa16.48■□□□□ 0.23
SHMT2-235ENST00000557740 ADAMTS10Q9H324 1103 aa16.48■□□□□ 0.23
SHMT2-235ENST00000557740 CD320Q9NPF0 282 aa16.48■□□□□ 0.23
SHMT2-235ENST00000557740 DDX25Q9UHL0 483 aaKnown RBP16.48■□□□□ 0.23
SHMT2-235ENST00000557740 M0R2N6 131 aa16.47■□□□□ 0.23
SHMT2-235ENST00000557740 HOXA2O43364 376 aa16.47■□□□□ 0.23
SHMT2-235ENST00000557740 FGFR1P11362 822 aa16.47■□□□□ 0.23
SHMT2-235ENST00000557740 ZSCAN20P17040 1043 aaPredicted RBP16.47■□□□□ 0.23
SHMT2-235ENST00000557740 EIF4BP23588 611 aaKnown RBP16.47■□□□□ 0.23
SHMT2-235ENST00000557740 DNAJB1P25685 340 aa16.47■□□□□ 0.23
SHMT2-235ENST00000557740 GTF2F1P35269 517 aaKnown RBP eCLIP16.47■□□□□ 0.23
SHMT2-235ENST00000557740 SCRN1Q12765 414 aa16.47■□□□□ 0.23
SHMT2-235ENST00000557740 CAMK1Q14012 370 aa16.47■□□□□ 0.23
SHMT2-235ENST00000557740 DSC3Q14574 896 aa16.47■□□□□ 0.23
SHMT2-235ENST00000557740 NPY5RQ15761 445 aa16.47■□□□□ 0.23
SHMT2-235ENST00000557740 CSPP1Q1MSJ5 1256 aa16.47■□□□□ 0.23
SHMT2-235ENST00000557740 CTC1Q2NKJ3 1217 aa16.47■□□□□ 0.23
SHMT2-235ENST00000557740 MTERF2Q49AM1 385 aa16.47■□□□□ 0.23
SHMT2-235ENST00000557740 XKR3Q5GH77 459 aa16.47■□□□□ 0.23
SHMT2-235ENST00000557740 FAM102BQ5T8I3 360 aa16.47■□□□□ 0.23
SHMT2-235ENST00000557740 THNSL1Q8IYQ7 743 aa16.47■□□□□ 0.23
SHMT2-235ENST00000557740 ETNPPLQ8TBG4 499 aa16.47■□□□□ 0.23
SHMT2-235ENST00000557740 NLRP7Q8WX94 980 aa16.47■□□□□ 0.23
SHMT2-235ENST00000557740 ZNF668Q96K58 619 aaPredicted RBP16.47■□□□□ 0.23
SHMT2-235ENST00000557740 ELAC1Q9H777 363 aaKnown RBP16.47■□□□□ 0.23
SHMT2-235ENST00000557740 KCNJ14Q9UNX9 436 aa16.47■□□□□ 0.23
SHMT2-235ENST00000557740 STK36Q9NRP7 1315 aa16.46■□□□□ 0.23
SHMT2-235ENST00000557740 MYH9P35579 1960 aaKnown RBP16.46■□□□□ 0.23
SHMT2-235ENST00000557740 DARSP14868 501 aaKnown RBP16.46■□□□□ 0.23
SHMT2-235ENST00000557740 LAG3P18627 525 aa16.46■□□□□ 0.23
SHMT2-235ENST00000557740 LTBRP36941 435 aa16.46■□□□□ 0.23
SHMT2-235ENST00000557740 NDUFV1P49821 464 aa16.46■□□□□ 0.23
SHMT2-235ENST00000557740 GPC3P51654 580 aa16.46■□□□□ 0.23
SHMT2-235ENST00000557740 LETM2Q2VYF4 491 aa16.46■□□□□ 0.23
SHMT2-235ENST00000557740 ABI1Q8IZP0 508 aa16.46■□□□□ 0.23
SHMT2-235ENST00000557740 COLGALT1Q8NBJ5 622 aa16.46■□□□□ 0.23
SHMT2-235ENST00000557740 MICAL1Q8TDZ2 1067 aa16.46■□□□□ 0.23
SHMT2-235ENST00000557740 KHSRPQ92945 711 aaKnown RBP eCLIP16.46■□□□□ 0.23
SHMT2-235ENST00000557740 MBOAT7Q96N66 472 aa16.46■□□□□ 0.23
SHMT2-235ENST00000557740 TMEM117Q9H0C3 514 aa16.46■□□□□ 0.23
SHMT2-235ENST00000557740 TYW1Q9NV66 732 aaKnown RBP16.46■□□□□ 0.23
SHMT2-235ENST00000557740 PRKAG3Q9UGI9 489 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms