RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 EXOC8Q8IYI6 725 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 NME8Q8N427 588 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 RDH13Q8NBN7 331 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 ERMNQ8TAM6 284 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 TNFRSF25Q93038 417 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 MAP7D2Q96T17 732 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 PCYT2Q99447 389 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 PHOX2BQ99453 314 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 JPH2Q9BR39 696 aaPredicted RBP9.35□□□□□ -0.91
PSEN1-223ENST00000557511 FAM49AQ9H0Q0 323 aaPredicted RBP9.35□□□□□ -0.91
PSEN1-223ENST00000557511 WNT8AQ9H1J5 351 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 KCNMB3Q9NPA1 279 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 TELO2Q9Y4R8 837 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 MAFBQ9Y5Q3 323 aaPredicted RBP9.35□□□□□ -0.91
PSEN1-223ENST00000557511 SLC4A7Q9Y6M7 1214 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 SCN10AQ9Y5Y9 1956 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 MYH7BA7E2Y1 1941 aa9.35□□□□□ -0.91
PSEN1-223ENST00000557511 SMIM35A0A1B0GVV1 85 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 VPS37CA5D8V6 355 aaPredicted RBP9.34□□□□□ -0.91
PSEN1-223ENST00000557511 BAIAP3O94812 1187 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 CD2BP2O95400 341 aaKnown RBP9.34□□□□□ -0.91
PSEN1-223ENST00000557511 P4HBP07237 508 aaKnown RBP9.34□□□□□ -0.91
PSEN1-223ENST00000557511 OR52Z1P0C646 297 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 KLRC1P26715 233 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 HOXC8P31273 242 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 QARSP47897 775 aaKnown RBP9.34□□□□□ -0.91
PSEN1-223ENST00000557511 DNM2P50570 870 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 PRKCEQ02156 737 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 TBC1D8BQ0IIM8 1120 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 IKBKEQ14164 716 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 EPHA7Q15375 998 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 ZNF174Q15697 407 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 KMT5BQ4FZB7 885 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 RILPL1Q5EBL4 403 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 EARS2Q5JPH6 523 aaKnown RBP9.34□□□□□ -0.91
PSEN1-223ENST00000557511 CNKSR3Q6P9H4 555 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 MTHFD1LQ6UB35 978 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 METTL13Q8N6R0 699 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 NEK9Q8TD19 979 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 DNAJB3Q8WWF6 145 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 HERVK_113Q902F9 699 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 SEPT8Q92599 483 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 DHX38Q92620 1227 aaKnown RBP9.34□□□□□ -0.91
PSEN1-223ENST00000557511 APBB2Q92870 758 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 INTS4Q96HW7 963 aaKnown RBP9.34□□□□□ -0.91
PSEN1-223ENST00000557511 SCLT1Q96NL6 688 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 TTC12Q9H892 705 aaPredicted RBP9.34□□□□□ -0.91
PSEN1-223ENST00000557511 MSRAQ9UJ68 235 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 PCDHA2Q9Y5H9 948 aa9.34□□□□□ -0.91
PSEN1-223ENST00000557511 IGSF9BQ9UPX0 1349 aa9.33□□□□□ -0.92
PSEN1-223ENST00000557511 ABHD14A-ACY1A0A1B0GW23 586 aa9.33□□□□□ -0.92
PSEN1-223ENST00000557511 MBLAC1A4D2B0 266 aaPredicted RBP9.33□□□□□ -0.92
PSEN1-223ENST00000557511 PDIA4P13667 645 aaKnown RBP9.33□□□□□ -0.92
PSEN1-223ENST00000557511 U2AF2P26368 475 aaKnown RBP eCLIP9.33□□□□□ -0.92
PSEN1-223ENST00000557511 EPHB4P54760 987 aa9.33□□□□□ -0.92
PSEN1-223ENST00000557511 ADAM17P78536 824 aa9.33□□□□□ -0.92
PSEN1-223ENST00000557511 MRPS6P82932 125 aaKnown RBP9.33□□□□□ -0.92
PSEN1-223ENST00000557511 SMAD3P84022 425 aaKnown RBP9.33□□□□□ -0.92
PSEN1-223ENST00000557511 CUL4AQ13619 759 aa9.33□□□□□ -0.92
PSEN1-223ENST00000557511 RAB30Q15771 203 aa9.33□□□□□ -0.92
PSEN1-223ENST00000557511 TRIM71Q2Q1W2 868 aaKnown RBP9.33□□□□□ -0.92
PSEN1-223ENST00000557511 RPAINQ86UA6 219 aa9.33□□□□□ -0.92
PSEN1-223ENST00000557511 USP38Q8NB14 1042 aa9.33□□□□□ -0.92
PSEN1-223ENST00000557511 BANK1Q8NDB2 785 aa9.33□□□□□ -0.92
PSEN1-223ENST00000557511 TRAPPC12Q8WVT3 735 aa9.33□□□□□ -0.92
PSEN1-223ENST00000557511 GJA10Q969M2 543 aa9.33□□□□□ -0.92
PSEN1-223ENST00000557511 SNX21Q969T3 373 aa9.33□□□□□ -0.92
PSEN1-223ENST00000557511 SLC9A7Q96T83 725 aa9.33□□□□□ -0.92
PSEN1-223ENST00000557511 ZSWIM4Q9H7M6 989 aa9.33□□□□□ -0.92
PSEN1-223ENST00000557511 AKT3Q9Y243 479 aa9.33□□□□□ -0.92
PSEN1-223ENST00000557511 GINS2Q9Y248 185 aa9.33□□□□□ -0.92
PSEN1-223ENST00000557511 PPME1Q9Y570 386 aa9.33□□□□□ -0.92
PSEN1-223ENST00000557511 TRPV2Q9Y5S1 764 aa9.33□□□□□ -0.92
PSEN1-223ENST00000557511 MKI67P46013 3256 aaKnown RBP9.33□□□□□ -0.92
PSEN1-223ENST00000557511 CEP290O15078 2479 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 LAD1O00515 517 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 EDIL3O43854 480 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 BMP15O95972 392 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 AMHP03971 560 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 CFHP08603 1231 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 ATP2A2P16615 1042 aaKnown RBP9.32□□□□□ -0.92
PSEN1-223ENST00000557511 FXR1P51114 621 aaKnown RBP eCLIP9.32□□□□□ -0.92
PSEN1-223ENST00000557511 CDC42EP1Q00587 391 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 MTERF2Q49AM1 385 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 FAM26DQ5JW98 314 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 ZNF697Q5TEC3 545 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 HAUS3Q68CZ6 603 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 EFCAB12Q6NXP0 572 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 RUFY4Q6ZNE9 571 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 FAM43BQ6ZT52 329 aaPredicted RBP9.32□□□□□ -0.92
PSEN1-223ENST00000557511 BRAPQ7Z569 592 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 TPH2Q8IWU9 490 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 PHOSPHO2Q8TCD6 241 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 SLC7A3Q8WY07 619 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 HAS1Q92839 578 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 CEP170P1Q96L14 293 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 CTAGE1Q96RT6 745 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 SUGCTQ9HAC7 445 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 VAV3Q9UKW4 847 aa9.32□□□□□ -0.92
PSEN1-223ENST00000557511 CDY2AQ9Y6F7 541 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms