RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 PLVAPQ9BX97 442 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 EHMT1Q9H9B1 1298 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 MAP3K20Q9NYL2 800 aaKnown RBP6.76□□□□□ -1.33
VPS33B-207ENST00000557470 CLEC1BQ9P126 229 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 ZSWIM5Q9P217 1185 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 GMPR2Q9P2T1 348 aaKnown RBP6.76□□□□□ -1.33
VPS33B-207ENST00000557470 MAD2L2Q9UI95 211 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 PLAGL2Q9UPG8 496 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 MRPL42Q9Y6G3 142 aaKnown RBP6.76□□□□□ -1.33
VPS33B-207ENST00000557470 WDR87Q6ZQQ6 2873 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 MYH6P13533 1939 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 LAMA4Q16363 1823 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 FRMPD4Q14CM0 1322 aa6.76□□□□□ -1.33
VPS33B-207ENST00000557470 MYO15AQ9UKN7 3530 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 SPATA31C2B4DYI2 1134 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 LOC730098B7Z3J9 87 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 ENPP3O14638 875 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 DGKIO75912 1065 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 GLP2RO95838 553 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 ITGB1P05556 798 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 ICAM3P32942 547 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 NRIP1P48552 1158 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 NT5C2P49902 561 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 RRP1P56182 461 aaKnown RBP6.75□□□□□ -1.33
VPS33B-207ENST00000557470 MARSP56192 900 aaKnown RBP6.75□□□□□ -1.33
VPS33B-207ENST00000557470 SP4Q02446 784 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 MGAT3Q09327 533 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 COASYQ13057 564 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 NEDD9Q14511 834 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 CBX2Q14781 532 aaPredicted RBP6.75□□□□□ -1.33
VPS33B-207ENST00000557470 TUSC1Q2TAM9 212 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 GNPTABQ3T906 1256 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 IFIT1BQ5T764 474 aaKnown RBP6.75□□□□□ -1.33
VPS33B-207ENST00000557470 UTP14CQ5TAP6 766 aaKnown RBP6.75□□□□□ -1.33
VPS33B-207ENST00000557470 TAF2Q6P1X5 1199 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 TICAM2Q86XR7 235 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 HOMER1Q86YM7 354 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 SUGP1Q8IWZ8 645 aaKnown RBP6.75□□□□□ -1.33
VPS33B-207ENST00000557470 FBXL6Q8N531 539 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 SAMD3Q8N6K7 520 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 EFHBQ8N7U6 833 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 SPPL3Q8TCT6 385 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 ZNF592Q92610 1267 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 PIGSQ96S52 555 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 PRRX2Q99811 253 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 UBAC1Q9BSL1 405 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 ALG2Q9H553 416 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 FAM86C1Q9NVL1 165 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 RTEL1Q9NZ71 1219 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 MAP10Q9P2G4 905 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 ZNF215Q9UL58 517 aaPredicted RBP6.75□□□□□ -1.33
VPS33B-207ENST00000557470 BARX2Q9UMQ3 279 aaPredicted RBP6.75□□□□□ -1.33
VPS33B-207ENST00000557470 USP15Q9Y4E8 981 aaPredicted RBP6.75□□□□□ -1.33
VPS33B-207ENST00000557470 PCDHGC5Q9Y5F6 944 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 KMT2EQ8IZD2 1858 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 NRCAMQ92823 1304 aa6.75□□□□□ -1.33
VPS33B-207ENST00000557470 TTC3P53804 2025 aa6.74□□□□□ -1.33
VPS33B-207ENST00000557470 FIBPO43427 364 aa6.74□□□□□ -1.33
VPS33B-207ENST00000557470 SDSP20132 328 aa6.74□□□□□ -1.33
VPS33B-207ENST00000557470 CD52P31358 61 aa6.74□□□□□ -1.33
VPS33B-207ENST00000557470 VCPP55072 806 aaKnown RBP6.74□□□□□ -1.33
VPS33B-207ENST00000557470 PPFIA1Q13136 1202 aa6.74□□□□□ -1.33
VPS33B-207ENST00000557470 SEC23AQ15436 765 aa6.74□□□□□ -1.33
VPS33B-207ENST00000557470 PKN1Q16512 942 aa6.74□□□□□ -1.33
VPS33B-207ENST00000557470 PAN2Q504Q3 1202 aaKnown RBP6.74□□□□□ -1.33
VPS33B-207ENST00000557470 FBXO47Q5MNV8 452 aa6.74□□□□□ -1.33
VPS33B-207ENST00000557470 CWC27Q6UX04 472 aaKnown RBP6.74□□□□□ -1.33
VPS33B-207ENST00000557470 TSHZ1Q6ZSZ6 1077 aa6.74□□□□□ -1.33
VPS33B-207ENST00000557470 RBM23Q86U06 439 aaKnown RBP6.74□□□□□ -1.33
VPS33B-207ENST00000557470 KLHL23Q8NBE8 558 aa6.74□□□□□ -1.33
VPS33B-207ENST00000557470 P2RX5Q93086 422 aa6.74□□□□□ -1.33
VPS33B-207ENST00000557470 PPP2R3CQ969Q6 453 aa6.74□□□□□ -1.33
VPS33B-207ENST00000557470 RILPL2Q969X0 211 aa6.74□□□□□ -1.33
VPS33B-207ENST00000557470 ASIC4Q96FT7 647 aa6.74□□□□□ -1.33
VPS33B-207ENST00000557470 AGO3Q9H9G7 860 aaKnown RBP6.74□□□□□ -1.33
VPS33B-207ENST00000557470 CDY2AQ9Y6F7 541 aa6.74□□□□□ -1.33
VPS33B-207ENST00000557470 DOCK5Q9H7D0 1870 aa6.74□□□□□ -1.33
VPS33B-207ENST00000557470 VPS13AQ96RL7 3174 aa6.74□□□□□ -1.33
VPS33B-207ENST00000557470 DMDP11532 3685 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 RIF1Q5UIP0 2472 aaKnown RBP6.73□□□□□ -1.33
VPS33B-207ENST00000557470 MBLAC1A4D2B0 266 aaPredicted RBP6.73□□□□□ -1.33
VPS33B-207ENST00000557470 CYTH3O43739 400 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 LILRB3O75022 631 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 STAM2O75886 525 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 MARK3P27448 753 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 CTHP32929 405 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 TCF7P36402 384 aaPredicted RBP6.73□□□□□ -1.33
VPS33B-207ENST00000557470 GATMP50440 423 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 MRPS6P82932 125 aaKnown RBP6.73□□□□□ -1.33
VPS33B-207ENST00000557470 RBM10P98175 930 aaKnown RBP6.73□□□□□ -1.33
VPS33B-207ENST00000557470 VAC14Q08AM6 782 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 SIGLEC14Q08ET2 396 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 GRM4Q14833 912 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 GRIK4Q16099 956 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 IMMTQ16891 758 aaKnown RBP6.73□□□□□ -1.33
VPS33B-207ENST00000557470 MARCH8Q5T0T0 291 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 CYB5R4Q7L1T6 521 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 RSPH3Q86UC2 560 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 RTN4RL1Q86UN2 441 aaPredicted RBP6.73□□□□□ -1.33
VPS33B-207ENST00000557470 NPAS4Q8IUM7 802 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms