RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 ZNF292O60281 2723 aa9.23□□□□□ -0.93
PCNX1-215ENST00000557428 C2orf16Q68DN1 1984 aa9.23□□□□□ -0.93
PCNX1-215ENST00000557428 SMIM35A0A1B0GVV1 85 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 DDX39AO00148 427 aaKnown RBP9.22□□□□□ -0.93
PCNX1-215ENST00000557428 CLASP2O75122 1294 aaKnown RBP9.22□□□□□ -0.93
PCNX1-215ENST00000557428 ARP10275 920 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 AOC1P19801 751 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 PLCB3Q01970 1234 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 BMS1Q14692 1282 aaKnown RBP9.22□□□□□ -0.93
PCNX1-215ENST00000557428 WTAPQ15007 396 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 KIZQ2M2Z5 673 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 SPECC1Q5M775 1068 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 ODR4Q5SWX8 454 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 KIAA1841Q6NSI8 718 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 XRRA1Q6P2D8 792 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 MTHFD1LQ6UB35 978 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 TMC5Q6UXY8 1006 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 SLC24A5Q71RS6 500 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 TRMT1LQ7Z2T5 733 aaKnown RBP9.22□□□□□ -0.93
PCNX1-215ENST00000557428 ZDHHC14Q8IZN3 488 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 LRRC43Q8N309 656 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 PIP4P2Q8N4L2 257 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 CYP2W1Q8TAV3 490 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 AUTS2Q8WXX7 1259 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 ACSF2Q96CM8 615 aaPredicted RBP9.22□□□□□ -0.93
PCNX1-215ENST00000557428 RRP36Q96EU6 259 aaKnown RBP9.22□□□□□ -0.93
PCNX1-215ENST00000557428 CNTNAP3BQ96NU0 1288 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 PCYT2Q99447 389 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 RTP3Q9BQQ7 232 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 SDF4Q9BRK5 362 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 CNTNAP3Q9BZ76 1288 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 LNPKQ9C0E8 428 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 TMEM117Q9H0C3 514 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 SENP2Q9HC62 589 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 TMEM161AQ9NX61 479 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 SPG21Q9NZD8 308 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 SLC9A2Q9UBY0 812 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 ST3GAL5Q9UNP4 418 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 CACNA1BQ00975 2339 aa9.22□□□□□ -0.93
PCNX1-215ENST00000557428 C2orf71A6NGG8 1288 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 SPDYE3A6NKU9 549 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 C9IYK1 514 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 NT5C1B-RDH14C9J2C7 533 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 BACH1O14867 736 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 GPR182O15218 404 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 HOXA2O43364 376 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 CXCL14O95715 111 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 EOMESO95936 686 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 CFHP08603 1231 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 EPCAMP16422 314 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 ITGB5P18084 799 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 KLRC1P26715 233 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 STAT5BP51692 787 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 ACTR2P61160 394 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 PUM1Q14671 1186 aaKnown RBP eCLIP9.21□□□□□ -0.94
PCNX1-215ENST00000557428 ATAT1Q5SQI0 421 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 LRRC55Q6ZSA7 311 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 CATIPQ7Z7H3 387 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 CABP7Q86V35 215 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 FAM228AQ86W67 206 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 NME8Q8N427 588 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 TMEM40Q8WWA1 233 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 CASD1Q96PB1 797 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 MYL10Q9BUA6 226 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 DSCC1Q9BVC3 393 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 CYP26B1Q9NR63 512 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 DZANK1Q9NVP4 752 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 CA14Q9ULX7 337 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 KDM3AQ9Y4C1 1321 aa9.21□□□□□ -0.94
PCNX1-215ENST00000557428 MEIS2O14770 477 aa9.2□□□□□ -0.94
PCNX1-215ENST00000557428 NARSO43776 548 aaKnown RBP9.2□□□□□ -0.94
PCNX1-215ENST00000557428 VTNP04004 478 aa9.2□□□□□ -0.94
PCNX1-215ENST00000557428 NPR3P17342 541 aa9.2□□□□□ -0.94
PCNX1-215ENST00000557428 TDGQ13569 410 aa9.2□□□□□ -0.94
PCNX1-215ENST00000557428 SART3Q15020 963 aaKnown RBP9.2□□□□□ -0.94
PCNX1-215ENST00000557428 B4GALNT3Q6L9W6 998 aa9.2□□□□□ -0.94
PCNX1-215ENST00000557428 CCDC149Q6ZUS6 474 aa9.2□□□□□ -0.94
PCNX1-215ENST00000557428 RALYLQ86SE5 291 aaKnown RBP9.2□□□□□ -0.94
PCNX1-215ENST00000557428 CKAP2LQ8IYA6 745 aa9.2□□□□□ -0.94
PCNX1-215ENST00000557428 METTL13Q8N6R0 699 aa9.2□□□□□ -0.94
PCNX1-215ENST00000557428 CTCFLQ8NI51 663 aaPredicted RBP9.2□□□□□ -0.94
PCNX1-215ENST00000557428 FEZF2Q8TBJ5 459 aa9.2□□□□□ -0.94
PCNX1-215ENST00000557428 HELQQ8TDG4 1101 aa9.2□□□□□ -0.94
PCNX1-215ENST00000557428 TMEM169Q96HH4 297 aa9.2□□□□□ -0.94
PCNX1-215ENST00000557428 ZNF668Q96K58 619 aaPredicted RBP9.2□□□□□ -0.94
PCNX1-215ENST00000557428 SCLT1Q96NL6 688 aa9.2□□□□□ -0.94
PCNX1-215ENST00000557428 PSTPIP2Q9H939 334 aa9.2□□□□□ -0.94
PCNX1-215ENST00000557428 JADE2Q9NQC1 790 aa9.2□□□□□ -0.94
PCNX1-215ENST00000557428 DUSP12Q9UNI6 340 aa9.2□□□□□ -0.94
PCNX1-215ENST00000557428 UBIAD1Q9Y5Z9 338 aa9.2□□□□□ -0.94
PCNX1-215ENST00000557428 MYH9P35579 1960 aaKnown RBP9.2□□□□□ -0.94
PCNX1-215ENST00000557428 hCG_1642624A0A1W2PR95 340 aa9.19□□□□□ -0.94
PCNX1-215ENST00000557428 PIK3CDO00329 1044 aa9.19□□□□□ -0.94
PCNX1-215ENST00000557428 ZC3H11AO75152 810 aaKnown RBP eCLIP9.19□□□□□ -0.94
PCNX1-215ENST00000557428 ZSCAN20P17040 1043 aaPredicted RBP9.19□□□□□ -0.94
PCNX1-215ENST00000557428 KIF5BP33176 963 aa9.19□□□□□ -0.94
PCNX1-215ENST00000557428 RSPO4Q2I0M5 234 aaPredicted RBP9.19□□□□□ -0.94
PCNX1-215ENST00000557428 FAM160B1Q5W0V3 765 aa9.19□□□□□ -0.94
PCNX1-215ENST00000557428 ZC3H14Q6PJT7 736 aaKnown RBP9.19□□□□□ -0.94
PCNX1-215ENST00000557428 OTOP3Q7RTS5 596 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms