RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 LRIG2O94898 1065 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 RHBDL3P58872 404 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 PPIGQ13427 754 aaKnown RBP eCLIP5.83□□□□□ -1.481e-6■■□□□ 14
SCFD1-223ENST00000557076 C22orf34Q6ZV56 151 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 ZNF365Q70YC5 407 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 RNF180Q86T96 592 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 DPP9Q86TI2 863 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 METTL16Q86W50 562 aaKnown RBP5.83□□□□□ -1.48
SCFD1-223ENST00000557076 C12orf40Q86WS4 652 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 FOXP4Q8IVH2 680 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-223ENST00000557076 ZNF507Q8TCN5 953 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 GRIN3AQ8TCU5 1115 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 ELMO3Q96BJ8 720 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 PAGR1Q9BTK6 254 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 SLC5A4Q9NY91 659 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 PI4KBQ9UBF8 816 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 NRBP1Q9UHY1 535 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 PCDHA4Q9UN74 947 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 CYP8B1Q9UNU6 501 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 MYH3P11055 1940 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 TRIOO75962 3097 aa5.83□□□□□ -1.48
SCFD1-223ENST00000557076 TCF20Q9UGU0 1960 aaKnown RBP5.82□□□□□ -1.48
SCFD1-223ENST00000557076 PRRC2BQ5JSZ5 2229 aaKnown RBP5.82□□□□□ -1.48
SCFD1-223ENST00000557076 FAM86C2PA6NEL3 165 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 F6X3S4 739 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 GIPC1O14908 333 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 PQBP1O60828 265 aaKnown RBP5.82□□□□□ -1.48
SCFD1-223ENST00000557076 VAMP4O75379 141 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 TSPAN15O95858 294 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 GLI1P08151 1106 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 ALADP13716 330 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 RAP1GAPP47736 663 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 CDK7P50613 346 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 SPTY2D1Q68D10 685 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-223ENST00000557076 CATSPERGQ6ZRH7 1159 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 ARMCX6Q7L4S7 300 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 UBE3DQ7Z6J8 389 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 TMEM199Q8N511 208 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 RETREG2Q8NC44 543 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 NUP133Q8WUM0 1156 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 TSR2Q969E8 191 aaKnown RBP5.82□□□□□ -1.48
SCFD1-223ENST00000557076 CCDC120Q96HB5 630 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 SUCLG2Q96I99 432 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 DHX36Q9H2U1 1008 aaKnown RBP5.82□□□□□ -1.48
SCFD1-223ENST00000557076 TBX21Q9UL17 535 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 MTCH2Q9Y6C9 303 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 AK9Q5TCS8 1911 aa5.82□□□□□ -1.48
SCFD1-223ENST00000557076 RFX7Q2KHR2 1363 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 ZNF521Q96K83 1311 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 A0A1W2PQ45 241 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-223ENST00000557076 A0A1W2PQY0 241 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 PAGE1O75459 146 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 FGBP02675 491 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 NBPF7P0C2Y1 421 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-223ENST00000557076 ZNF865P0CJ78 1059 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-223ENST00000557076 RARBP10826 455 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 CSF2RAP15509 400 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 MAPK1P28482 360 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 ADORA2AP29274 412 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 BTDP43251 543 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 PICALMQ13492 652 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 PRAMEF19Q5SWL8 479 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 LCE4AQ5TA78 99 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 WDR78Q5VTH9 848 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 ANO1Q5XXA6 986 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 PSRC1Q6PGN9 363 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-223ENST00000557076 CYFIP1Q7L576 1253 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 DZIP1Q86YF9 867 aaKnown RBP5.81□□□□□ -1.48
SCFD1-223ENST00000557076 NPAS4Q8IUM7 802 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 ABRAQ8N0Z2 381 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 KIRREL1Q96J84 757 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 C12orf42Q96LP6 360 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 MTIF3Q9H2K0 278 aaKnown RBP5.81□□□□□ -1.48
SCFD1-223ENST00000557076 NKX2-4Q9H2Z4 354 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 BICC1Q9H694 974 aaKnown RBP5.81□□□□□ -1.48
SCFD1-223ENST00000557076 CD320Q9NPF0 282 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 HOXC10Q9NYD6 342 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 BTBD7Q9P203 1132 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 GNEQ9Y223 722 aaKnown RBP5.81□□□□□ -1.48
SCFD1-223ENST00000557076 YBX2Q9Y2T7 364 aaKnown RBP5.81□□□□□ -1.48
SCFD1-223ENST00000557076 PCDHA11Q9Y5I1 949 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 CACNA1GO43497 2377 aa5.81□□□□□ -1.48
SCFD1-223ENST00000557076 RIF1Q5UIP0 2472 aaKnown RBP5.81□□□□□ -1.48
SCFD1-223ENST00000557076 ZFHX2Q9C0A1 2572 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-223ENST00000557076 ELP1O95163 1332 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-223ENST00000557076 EYA2O00167 538 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 PGK1P00558 417 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 LDHCP07864 332 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 ACRP10323 421 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 ACLYP53396 1101 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 MECOMQ03112 1051 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 CCDC27Q2M243 656 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 TMEM67Q5HYA8 995 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 FAM47AQ5JRC9 791 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 SFRP5Q5T4F7 317 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 CCSAPQ6IQ19 270 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-223ENST00000557076 ZNF746Q6NUN9 644 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-223ENST00000557076 MPZL3Q6UWV2 235 aa5.8□□□□□ -1.48
SCFD1-223ENST00000557076 ATG9AQ7Z3C6 839 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms