RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 MAGEB2O15479 319 aa10.82□□□□□ -0.68
TMEM260-213ENST00000556929 ACTN4O43707 911 aaKnown RBP10.82□□□□□ -0.68
TMEM260-213ENST00000556929 DGAT1O75907 488 aa10.82□□□□□ -0.68
TMEM260-213ENST00000556929 MYL1P05976 194 aa10.82□□□□□ -0.68
TMEM260-213ENST00000556929 SMIM10L2AP0DMW4 78 aa10.82□□□□□ -0.68
TMEM260-213ENST00000556929 SMIM10L2BP0DMW5 78 aa10.82□□□□□ -0.68
TMEM260-213ENST00000556929 RFC5P40937 340 aa10.82□□□□□ -0.68
TMEM260-213ENST00000556929 POLGP54098 1239 aaPredicted RBP10.82□□□□□ -0.68
TMEM260-213ENST00000556929 SLC12A3P55017 1021 aa10.82□□□□□ -0.68
TMEM260-213ENST00000556929 NPEPPSP55786 919 aa10.82□□□□□ -0.68
TMEM260-213ENST00000556929 TBC1D8BQ0IIM8 1120 aa10.82□□□□□ -0.68
TMEM260-213ENST00000556929 PPFIA1Q13136 1202 aa10.82□□□□□ -0.68
TMEM260-213ENST00000556929 GRIK4Q16099 956 aa10.82□□□□□ -0.68
TMEM260-213ENST00000556929 PADI6Q6TGC4 694 aa10.82□□□□□ -0.68
TMEM260-213ENST00000556929 GPBP1Q86WP2 473 aa10.82□□□□□ -0.68
TMEM260-213ENST00000556929 ELOA2Q8IYF1 753 aaPredicted RBP10.82□□□□□ -0.68
TMEM260-213ENST00000556929 SLC7A3Q8WY07 619 aa10.82□□□□□ -0.68
TMEM260-213ENST00000556929 SYAP1Q96A49 352 aaPredicted RBP10.82□□□□□ -0.68
TMEM260-213ENST00000556929 TIPINQ9BVW5 301 aa10.82□□□□□ -0.68
TMEM260-213ENST00000556929 KBTBD4Q9NVX7 518 aa10.82□□□□□ -0.68
TMEM260-213ENST00000556929 TRIP12Q14669 1992 aaPredicted RBP10.82□□□□□ -0.68
TMEM260-213ENST00000556929 TMEM150BA6NC51 233 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 GAS2O43903 313 aaKnown RBP10.81□□□□□ -0.68
TMEM260-213ENST00000556929 MAFO75444 373 aaPredicted RBP10.81□□□□□ -0.68
TMEM260-213ENST00000556929 AFMP43652 599 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 IGBP1P78318 339 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 ITGA7Q13683 1181 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 TARBP2Q15633 366 aaKnown RBP10.81□□□□□ -0.68
TMEM260-213ENST00000556929 KLHL40Q2TBA0 621 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 NBPF20Q3BBV1 942 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 FAM47CQ5HY64 1035 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 RINT1Q6NUQ1 792 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 NFRKBQ6P4R8 1299 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 SESTD1Q86VW0 696 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 RETREG2Q8NC44 543 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 MCPH1Q8NEM0 835 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 LRRC15Q8TF66 581 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 PAGE5Q96GU1 130 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 MTRQ99707 1265 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 SH2D3AQ9BRG2 576 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 NUP62CLQ9H1M0 184 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 ATP6V0A4Q9HBG4 840 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 SETD4Q9NVD3 440 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 HDAC6Q9UBN7 1215 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 GTF2IRD1Q9UHL9 959 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 PCDHB8Q9UN66 801 aa10.81□□□□□ -0.68
TMEM260-213ENST00000556929 GTPBP6O43824 516 aaPredicted RBP10.8□□□□□ -0.68
TMEM260-213ENST00000556929 TRAK2O60296 914 aa10.8□□□□□ -0.68
TMEM260-213ENST00000556929 USO1O60763 962 aaKnown RBP10.8□□□□□ -0.68
TMEM260-213ENST00000556929 CYP11B2P19099 503 aa10.8□□□□□ -0.68
TMEM260-213ENST00000556929 KLRC1P26715 233 aa10.8□□□□□ -0.68
TMEM260-213ENST00000556929 TMOD1P28289 359 aa10.8□□□□□ -0.68
TMEM260-213ENST00000556929 DNM2P50570 870 aa10.8□□□□□ -0.68
TMEM260-213ENST00000556929 POSTNQ15063 836 aa10.8□□□□□ -0.68
TMEM260-213ENST00000556929 MTHFD1LQ6UB35 978 aa10.8□□□□□ -0.68
TMEM260-213ENST00000556929 C1orf186Q6ZWK4 172 aa10.8□□□□□ -0.68
TMEM260-213ENST00000556929 DYMQ7RTS9 669 aa10.8□□□□□ -0.68
TMEM260-213ENST00000556929 SH3RF1Q7Z6J0 888 aa10.8□□□□□ -0.68
TMEM260-213ENST00000556929 TCP11Q8WWU5 503 aa10.8□□□□□ -0.68
TMEM260-213ENST00000556929 STAMQ92783 540 aa10.8□□□□□ -0.68
TMEM260-213ENST00000556929 CCDC47Q96A33 483 aaKnown RBP10.8□□□□□ -0.68
TMEM260-213ENST00000556929 C7orf25Q9BPX7 421 aa10.8□□□□□ -0.68
TMEM260-213ENST00000556929 TRIM9Q9C026 710 aa10.8□□□□□ -0.68
TMEM260-213ENST00000556929 SENP6Q9GZR1 1112 aaPredicted RBP10.8□□□□□ -0.68
TMEM260-213ENST00000556929 C11orf49Q9H6J7 331 aa10.8□□□□□ -0.68
TMEM260-213ENST00000556929 DHX33Q9H6R0 707 aaKnown RBP10.8□□□□□ -0.68
TMEM260-213ENST00000556929 TUBE1Q9UJT0 475 aa10.8□□□□□ -0.68
TMEM260-213ENST00000556929 ODF2LQ9ULJ1 636 aa10.8□□□□□ -0.68
TMEM260-213ENST00000556929 MROH7Q68CQ1 1323 aa10.8□□□□□ -0.68
TMEM260-213ENST00000556929 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.79□□□□□ -0.68
TMEM260-213ENST00000556929 MYMKA6NI61 221 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 ZBTB42B2RXF5 422 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 ARVCFO00192 962 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 SMC2O95347 1197 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 C22orf31O95567 290 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 RPLP2P05387 115 aaKnown RBP10.79□□□□□ -0.68
TMEM260-213ENST00000556929 CYP2C9P11712 490 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 GUCY2CP25092 1073 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 ASIC1P78348 528 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 CUL4BQ13620 913 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 GIT2Q14161 759 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 EMC2Q15006 297 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 CAMK4Q16566 473 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 CCDC183Q5T5S1 534 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 FAM102BQ5T8I3 360 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 COL13A1Q5TAT6 717 aaPredicted RBP10.79□□□□□ -0.68
TMEM260-213ENST00000556929 IER5Q5VY09 327 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 EFCAB12Q6NXP0 572 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 MAEAQ7L5Y9 396 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 NECAB2Q7Z6G3 386 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 CCDC65Q8IXS2 484 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 SLC43A3Q8NBI5 491 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 LMBR1Q8WVP7 490 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 TRAPPC12Q8WVT3 735 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 DDX12PQ92771 950 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 KIFAP3Q92845 792 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 DRC1Q96MC2 740 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 CEP89Q96ST8 783 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 RUSC1Q9BVN2 902 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 BLZF1Q9H2G9 400 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms