RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.59■■□□□ 1.69
TDP1-216ENST00000556867 AKT3Q9Y243 479 aa25.59■■□□□ 1.69
TDP1-216ENST00000556867 CHD9Q3L8U1 2897 aa25.58■■□□□ 1.69
TDP1-216ENST00000556867 GPR32O75388 356 aa25.58■■□□□ 1.69
TDP1-216ENST00000556867 MAFO75444 373 aaPredicted RBP25.58■■□□□ 1.69
TDP1-216ENST00000556867 CD52P31358 61 aa25.58■■□□□ 1.69
TDP1-216ENST00000556867 TECP42680 631 aa25.58■■□□□ 1.69
TDP1-216ENST00000556867 FXR2P51116 673 aaKnown RBP eCLIP25.58■■□□□ 1.69
TDP1-216ENST00000556867 CRYBB1P53674 252 aaPredicted RBP25.58■■□□□ 1.69
TDP1-216ENST00000556867 NPEPPSP55786 919 aa25.58■■□□□ 1.69
TDP1-216ENST00000556867 PTGDRQ13258 359 aa25.58■■□□□ 1.69
TDP1-216ENST00000556867 KIZQ2M2Z5 673 aa25.58■■□□□ 1.69
TDP1-216ENST00000556867 TMEM266Q2M3C6 531 aa25.58■■□□□ 1.69
TDP1-216ENST00000556867 OTUD6AQ7L8S5 288 aa25.58■■□□□ 1.69
TDP1-216ENST00000556867 JPH2Q9BR39 696 aaPredicted RBP25.58■■□□□ 1.69
TDP1-216ENST00000556867 NKX2-4Q9H2Z4 354 aa25.58■■□□□ 1.69
TDP1-216ENST00000556867 CDHR5Q9HBB8 845 aa25.58■■□□□ 1.69
TDP1-216ENST00000556867 GINS2Q9Y248 185 aa25.58■■□□□ 1.69
TDP1-216ENST00000556867 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.57■■□□□ 1.68
TDP1-216ENST00000556867 LAD1O00515 517 aa25.57■■□□□ 1.68
TDP1-216ENST00000556867 GJB5O95377 273 aa25.57■■□□□ 1.68
TDP1-216ENST00000556867 MYOGP15173 224 aa25.57■■□□□ 1.68
TDP1-216ENST00000556867 PAK2Q13177 524 aa25.57■■□□□ 1.68
TDP1-216ENST00000556867 FAM43BQ6ZT52 329 aaPredicted RBP25.57■■□□□ 1.68
TDP1-216ENST00000556867 TMEM40Q8WWA1 233 aa25.57■■□□□ 1.68
TDP1-216ENST00000556867 CEP170P1Q96L14 293 aa25.57■■□□□ 1.68
TDP1-216ENST00000556867 FAM161BQ96MY7 647 aa25.57■■□□□ 1.68
TDP1-216ENST00000556867 ADAMTS10Q9H324 1103 aa25.57■■□□□ 1.68
TDP1-216ENST00000556867 ZNF576Q9H609 170 aa25.57■■□□□ 1.68
TDP1-216ENST00000556867 TUFT1Q9NNX1 390 aa25.57■■□□□ 1.68
TDP1-216ENST00000556867 PADI3Q9ULW8 664 aa25.57■■□□□ 1.68
TDP1-216ENST00000556867 MYO9BQ13459 2157 aa25.56■■□□□ 1.68
TDP1-216ENST00000556867 RFC5P40937 340 aa25.56■■□□□ 1.68
TDP1-216ENST00000556867 DRP2Q13474 957 aa25.56■■□□□ 1.68
TDP1-216ENST00000556867 BRAPQ7Z569 592 aa25.56■■□□□ 1.68
TDP1-216ENST00000556867 TMCO2Q7Z6W1 182 aaPredicted RBP25.56■■□□□ 1.68
TDP1-216ENST00000556867 HSCBQ8IWL3 235 aa25.56■■□□□ 1.68
TDP1-216ENST00000556867 EXOC8Q8IYI6 725 aa25.56■■□□□ 1.68
TDP1-216ENST00000556867 MYOCDQ8IZQ8 938 aa25.56■■□□□ 1.68
TDP1-216ENST00000556867 ZNF579Q8NAF0 562 aaKnown RBP25.56■■□□□ 1.68
TDP1-216ENST00000556867 GUCD1Q96NT3 240 aa25.56■■□□□ 1.68
TDP1-216ENST00000556867 PPP1R16BQ96T49 567 aa25.56■■□□□ 1.68
TDP1-216ENST00000556867 OSMRQ99650 979 aa25.56■■□□□ 1.68
TDP1-216ENST00000556867 FTHL17Q9BXU8 183 aa25.56■■□□□ 1.68
TDP1-216ENST00000556867 DHX33Q9H6R0 707 aaKnown RBP25.56■■□□□ 1.68
TDP1-216ENST00000556867 SLC28A3Q9HAS3 691 aa25.56■■□□□ 1.68
TDP1-216ENST00000556867 TTC3P53804 2025 aa25.55■■□□□ 1.68
TDP1-216ENST00000556867 VPS37CA5D8V6 355 aaPredicted RBP25.55■■□□□ 1.68
TDP1-216ENST00000556867 TLL1O43897 1013 aa25.55■■□□□ 1.68
TDP1-216ENST00000556867 SPATA31C1P0DKV0 1188 aa25.55■■□□□ 1.68
TDP1-216ENST00000556867 PRPHP41219 470 aa25.55■■□□□ 1.68
TDP1-216ENST00000556867 DNM2P50570 870 aa25.55■■□□□ 1.68
TDP1-216ENST00000556867 GPC3P51654 580 aa25.55■■□□□ 1.68
TDP1-216ENST00000556867 NLRP11P59045 1033 aaKnown RBP25.55■■□□□ 1.68
TDP1-216ENST00000556867 ERMNQ8TAM6 284 aa25.55■■□□□ 1.68
TDP1-216ENST00000556867 SLC7A3Q8WY07 619 aa25.55■■□□□ 1.68
TDP1-216ENST00000556867 POLR3CQ9BUI4 534 aaPredicted RBP25.55■■□□□ 1.68
TDP1-216ENST00000556867 ERVK-5Q9HDB9 667 aa25.55■■□□□ 1.68
TDP1-216ENST00000556867 ANKEF1Q9NU02 776 aa25.55■■□□□ 1.68
TDP1-216ENST00000556867 NOC2LQ9Y3T9 749 aaKnown RBP25.55■■□□□ 1.68
TDP1-216ENST00000556867 ZBTB39O15060 712 aa25.54■■□□□ 1.68
TDP1-216ENST00000556867 RPS6KA5O75582 802 aa25.54■■□□□ 1.68
TDP1-216ENST00000556867 CA3P07451 260 aa25.54■■□□□ 1.68
TDP1-216ENST00000556867 SYT1P21579 422 aa25.54■■□□□ 1.68
TDP1-216ENST00000556867 POLGP54098 1239 aaPredicted RBP25.54■■□□□ 1.68
TDP1-216ENST00000556867 XKR9Q5GH70 373 aa25.54■■□□□ 1.68
TDP1-216ENST00000556867 ODR4Q5SWX8 454 aa25.54■■□□□ 1.68
TDP1-216ENST00000556867 CATSPER3Q86XQ3 398 aa25.54■■□□□ 1.68
TDP1-216ENST00000556867 RAD9AQ99638 391 aa25.54■■□□□ 1.68
TDP1-216ENST00000556867 ZBED2Q9BTP6 218 aa25.54■■□□□ 1.68
TDP1-216ENST00000556867 CDH23Q9H251 3354 aa25.53■■□□□ 1.68
TDP1-216ENST00000556867 GAS2O43903 313 aaKnown RBP25.53■■□□□ 1.68
TDP1-216ENST00000556867 MED24O75448 989 aa25.53■■□□□ 1.68
TDP1-216ENST00000556867 RPA1P27694 616 aa25.53■■□□□ 1.68
TDP1-216ENST00000556867 ATP2C1P98194 919 aaPredicted RBP25.53■■□□□ 1.68
TDP1-216ENST00000556867 CDC42EP1Q00587 391 aa25.53■■□□□ 1.68
TDP1-216ENST00000556867 PDIA5Q14554 519 aa25.53■■□□□ 1.68
TDP1-216ENST00000556867 PPP2R2DQ66LE6 453 aa25.53■■□□□ 1.68
TDP1-216ENST00000556867 HAUS3Q68CZ6 603 aa25.53■■□□□ 1.68
TDP1-216ENST00000556867 IGSF22Q8N9C0 903 aa25.53■■□□□ 1.68
TDP1-216ENST00000556867 LINC01599Q8WXQ3 324 aa25.53■■□□□ 1.68
TDP1-216ENST00000556867 TOP1MTQ969P6 601 aa25.53■■□□□ 1.68
TDP1-216ENST00000556867 RAB34Q9BZG1 259 aa25.53■■□□□ 1.68
TDP1-216ENST00000556867 SUCLA2Q9P2R7 463 aaPredicted RBP25.53■■□□□ 1.68
TDP1-216ENST00000556867 CHD7Q9P2D1 2997 aa25.53■■□□□ 1.68
TDP1-216ENST00000556867 ENPP3O14638 875 aa25.52■■□□□ 1.68
TDP1-216ENST00000556867 GPR182O15218 404 aa25.52■■□□□ 1.68
TDP1-216ENST00000556867 XRCC6P12956 609 aaKnown RBP eCLIP25.52■■□□□ 1.68
TDP1-216ENST00000556867 EMC2Q15006 297 aa25.52■■□□□ 1.68
TDP1-216ENST00000556867 FAM228AQ86W67 206 aa25.52■■□□□ 1.68
TDP1-216ENST00000556867 TSPYL2Q9H2G4 693 aaPredicted RBP25.52■■□□□ 1.68
TDP1-216ENST00000556867 TMX1Q9H3N1 280 aa25.52■■□□□ 1.68
TDP1-216ENST00000556867 FOXD4L1Q9NU39 408 aa25.52■■□□□ 1.68
TDP1-216ENST00000556867 ST3GAL5Q9UNP4 418 aa25.52■■□□□ 1.68
TDP1-216ENST00000556867 MUTP22033 750 aa25.51■■□□□ 1.67
TDP1-216ENST00000556867 EIF4BP23588 611 aaKnown RBP25.51■■□□□ 1.67
TDP1-216ENST00000556867 RARRES1P49788 294 aa25.51■■□□□ 1.67
TDP1-216ENST00000556867 HTRA4P83105 476 aaPredicted RBP25.51■■□□□ 1.67
TDP1-216ENST00000556867 NFX1Q12986 1120 aaKnown RBP25.51■■□□□ 1.67
TDP1-216ENST00000556867 GRIN2CQ14957 1233 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms