RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-222ENST00000556778 DRP2Q13474 957 aa9.9□□□□□ -0.82
PRKCH-222ENST00000556778 EPHA7Q15375 998 aa9.9□□□□□ -0.82
PRKCH-222ENST00000556778 SF3A1Q15459 793 aaKnown RBP9.9□□□□□ -0.82
PRKCH-222ENST00000556778 SHHQ15465 462 aa9.9□□□□□ -0.82
PRKCH-222ENST00000556778 RILPL1Q5EBL4 403 aa9.9□□□□□ -0.82
PRKCH-222ENST00000556778 PLA2G4FQ68DD2 849 aa9.9□□□□□ -0.82
PRKCH-222ENST00000556778 MTHFD1LQ6UB35 978 aa9.9□□□□□ -0.82
PRKCH-222ENST00000556778 DEFB128Q7Z7B8 93 aa9.9□□□□□ -0.82
PRKCH-222ENST00000556778 CATSPER3Q86XQ3 398 aa9.9□□□□□ -0.82
PRKCH-222ENST00000556778 ZNF668Q96K58 619 aaPredicted RBP9.9□□□□□ -0.82
PRKCH-222ENST00000556778 ZFRQ96KR1 1074 aaKnown RBP9.9□□□□□ -0.82
PRKCH-222ENST00000556778 CEP89Q96ST8 783 aa9.9□□□□□ -0.82
PRKCH-222ENST00000556778 UBE2OQ9C0C9 1292 aaKnown RBP9.9□□□□□ -0.82
PRKCH-222ENST00000556778 TFIP11Q9UBB9 837 aaKnown RBP9.9□□□□□ -0.82
PRKCH-222ENST00000556778 DAXXQ9UER7 740 aaPredicted RBP9.9□□□□□ -0.82
PRKCH-222ENST00000556778 TCEAL9Q9UHQ7 104 aa9.9□□□□□ -0.82
PRKCH-222ENST00000556778 MYH6P13533 1939 aa9.9□□□□□ -0.83
PRKCH-222ENST00000556778 FRMPD3Q5JV73 1810 aa9.89□□□□□ -0.83
PRKCH-222ENST00000556778 MBLAC1A4D2B0 266 aaPredicted RBP9.89□□□□□ -0.83
PRKCH-222ENST00000556778 HBP1O60381 514 aa9.89□□□□□ -0.83
PRKCH-222ENST00000556778 NBNO60934 754 aa9.89□□□□□ -0.83
PRKCH-222ENST00000556778 CHRNA1P02708 482 aa9.89□□□□□ -0.83
PRKCH-222ENST00000556778 OATP04181 439 aa9.89□□□□□ -0.83
PRKCH-222ENST00000556778 QARSP47897 775 aaKnown RBP9.89□□□□□ -0.83
PRKCH-222ENST00000556778 PSMC5P62195 406 aa9.89□□□□□ -0.83
PRKCH-222ENST00000556778 FPGSQ05932 587 aa9.89□□□□□ -0.83
PRKCH-222ENST00000556778 KIAA0319LQ8IZA0 1049 aa9.89□□□□□ -0.83
PRKCH-222ENST00000556778 LRRC71Q8N4P6 559 aa9.89□□□□□ -0.83
PRKCH-222ENST00000556778 PIGOQ8TEQ8 1089 aa9.89□□□□□ -0.83
PRKCH-222ENST00000556778 TATDN2Q93075 761 aa9.89□□□□□ -0.83
PRKCH-222ENST00000556778 PPP1R16BQ96T49 567 aa9.89□□□□□ -0.83
PRKCH-222ENST00000556778 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.89□□□□□ -0.83
PRKCH-222ENST00000556778 LXNQ9BS40 222 aa9.89□□□□□ -0.83
PRKCH-222ENST00000556778 SEZ6LQ9BYH1 1024 aa9.89□□□□□ -0.83
PRKCH-222ENST00000556778 POLD4Q9HCU8 107 aa9.89□□□□□ -0.83
PRKCH-222ENST00000556778 TUBE1Q9UJT0 475 aa9.89□□□□□ -0.83
PRKCH-222ENST00000556778 RANBP2P49792 3224 aaKnown RBP9.88□□□□□ -0.83
PRKCH-222ENST00000556778 VWA3AA6NCI4 1184 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 RRN3P2A6NIE6 340 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 C22orf31O95567 290 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 P4HBP07237 508 aaKnown RBP9.88□□□□□ -0.83
PRKCH-222ENST00000556778 ZSCAN22P10073 491 aaPredicted RBP9.88□□□□□ -0.83
PRKCH-222ENST00000556778 GNAT1P11488 350 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 SELPP16109 830 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 SLC26A2P50443 739 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 ATP2C1P98194 919 aaPredicted RBP9.88□□□□□ -0.83
PRKCH-222ENST00000556778 PTPAQ15257 358 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 TARBP2Q15633 366 aaKnown RBP9.88□□□□□ -0.83
PRKCH-222ENST00000556778 MTERF2Q49AM1 385 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 ZNF484Q5JVG2 852 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 SPECC1Q5M775 1068 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 ZNF365Q70YC5 407 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 LRRC8DQ7L1W4 858 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 OTOP2Q7RTS6 562 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 BRAPQ7Z569 592 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 TMEM199Q8N511 208 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 METTL13Q8N6R0 699 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 RETREG2Q8NC44 543 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 ANKK1Q8NFD2 765 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 RDM1Q8NG50 284 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 USP28Q96RU2 1077 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 PLIN2Q99541 437 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 NIFKQ9BYG3 293 aaKnown RBP9.88□□□□□ -0.83
PRKCH-222ENST00000556778 SUGCTQ9HAC7 445 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 NRBP2Q9NSY0 501 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 CXXC1Q9P0U4 656 aaPredicted RBP9.88□□□□□ -0.83
PRKCH-222ENST00000556778 HCSTQ9UBK5 93 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 PCDHA2Q9Y5H9 948 aa9.88□□□□□ -0.83
PRKCH-222ENST00000556778 RSPH10B2B2RC85 870 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 VTNP04004 478 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 RSPH10BP0C881 870 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 MARCKSP29966 332 aaPredicted RBP9.87□□□□□ -0.83
PRKCH-222ENST00000556778 YWHABP31946 246 aaKnown RBP9.87□□□□□ -0.83
PRKCH-222ENST00000556778 BMP8BP34820 402 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 CLCN3P51790 818 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 BFSP2Q13515 415 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 XKR3Q5GH77 459 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 TMEM240Q5SV17 173 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 FAM109BQ6ICB4 259 aaPredicted RBP9.87□□□□□ -0.83
PRKCH-222ENST00000556778 EFCAB12Q6NXP0 572 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 DTHD1Q6ZMT9 781 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 NUDT18Q6ZVK8 323 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 USP49Q70CQ1 688 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 TMCO2Q7Z6W1 182 aaPredicted RBP9.87□□□□□ -0.83
PRKCH-222ENST00000556778 KSR1Q8IVT5 923 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 IGSF22Q8N9C0 903 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 LRRC15Q8TF66 581 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 CLIC6Q96NY7 704 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 MMTAG2Q9BU76 263 aaKnown RBP9.87□□□□□ -0.83
PRKCH-222ENST00000556778 ZSWIM4Q9H7M6 989 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 IL23AQ9NPF7 189 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 LRWD1Q9UFC0 647 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 GINS2Q9Y248 185 aa9.87□□□□□ -0.83
PRKCH-222ENST00000556778 SMIM35A0A1B0GVV1 85 aa9.86□□□□□ -0.83
PRKCH-222ENST00000556778 GRXCR1A8MXD5 290 aa9.86□□□□□ -0.83
PRKCH-222ENST00000556778 SOX1O00570 391 aaPredicted RBP9.86□□□□□ -0.83
PRKCH-222ENST00000556778 CSDE1O75534 798 aaKnown RBP9.86□□□□□ -0.83
PRKCH-222ENST00000556778 F13A1P00488 732 aa9.86□□□□□ -0.83
PRKCH-222ENST00000556778 RBL2Q08999 1139 aa9.86□□□□□ -0.83
PRKCH-222ENST00000556778 MGAT3Q09327 533 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms