RNA–Protein interactions for RNA: ENST00000556647.1

SRSF5-216, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-216ENST00000556647 SPATA6Q9NWH7 488 aaPredicted RBP11.26□□□□□ -0.61
SRSF5-216ENST00000556647 ZNF215Q9UL58 517 aaPredicted RBP11.26□□□□□ -0.61
SRSF5-216ENST00000556647 PCDHGA2Q9Y5H1 932 aa11.26□□□□□ -0.61
SRSF5-216ENST00000556647 NRCAMQ92823 1304 aa11.26□□□□□ -0.61
SRSF5-216ENST00000556647 C2orf71A6NGG8 1288 aa11.25□□□□□ -0.61
SRSF5-216ENST00000556647 PATL2C9JE40 543 aaKnown RBP11.25□□□□□ -0.61
SRSF5-216ENST00000556647 RANBP6O60518 1105 aaKnown RBP11.25□□□□□ -0.61
SRSF5-216ENST00000556647 LAG3P18627 525 aa11.25□□□□□ -0.61
SRSF5-216ENST00000556647 GNAT2P19087 354 aa11.25□□□□□ -0.61
SRSF5-216ENST00000556647 SARSP49591 514 aaKnown RBP11.25□□□□□ -0.61
SRSF5-216ENST00000556647 SHC2P98077 582 aa11.25□□□□□ -0.61
SRSF5-216ENST00000556647 PPARAQ07869 468 aa11.25□□□□□ -0.61
SRSF5-216ENST00000556647 NONOQ15233 471 aaKnown RBP eCLIP11.25□□□□□ -0.61
SRSF5-216ENST00000556647 HSP90AB4PQ58FF6 505 aa11.25□□□□□ -0.61
SRSF5-216ENST00000556647 LRSAM1Q6UWE0 723 aa11.25□□□□□ -0.61
SRSF5-216ENST00000556647 MCF2L2Q86YR7 1114 aa11.25□□□□□ -0.61
SRSF5-216ENST00000556647 MRPL43Q8N983 215 aaKnown RBP11.25□□□□□ -0.61
SRSF5-216ENST00000556647 GPR152Q8TDT2 470 aa11.25□□□□□ -0.61
SRSF5-216ENST00000556647 EPC1Q9H2F5 836 aa11.25□□□□□ -0.61
SRSF5-216ENST00000556647 CWH43Q9H720 699 aa11.25□□□□□ -0.61
SRSF5-216ENST00000556647 DZANK1Q9NVP4 752 aa11.25□□□□□ -0.61
SRSF5-216ENST00000556647 PADI3Q9ULW8 664 aa11.25□□□□□ -0.61
SRSF5-216ENST00000556647 C1QTNF9BB2RNN3 333 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 CFBP00751 764 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 C1QTNF9P0C862 333 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 TGFB3P10600 412 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 HSPD1P10809 573 aaKnown RBP11.24□□□□□ -0.61
SRSF5-216ENST00000556647 EPCAMP16422 314 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 PBX3P40426 434 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 MRPS6P82932 125 aaKnown RBP11.24□□□□□ -0.61
SRSF5-216ENST00000556647 PAK2Q13177 524 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 LPAL2Q16609 132 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 TRMT2AQ8IZ69 625 aaKnown RBP11.24□□□□□ -0.61
SRSF5-216ENST00000556647 SLC44A3Q8N4M1 653 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 PJA1Q8NG27 643 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 APPBP2Q92624 585 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 KIF1BPQ96EK5 621 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 TMEM47Q9BQJ4 181 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 NACAP1Q9BZK3 213 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 NAPBQ9H115 298 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 CPVLQ9H3G5 476 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 ARHGEF3Q9NR81 526 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 FBXO4Q9UKT5 387 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 ABCB11O95342 1321 aa11.24□□□□□ -0.61
SRSF5-216ENST00000556647 DENND4AQ7Z401 1863 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 LOXHD1Q8IVV2 1947 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 M0R2C6 588 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 TRAK2O60296 914 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 TBC1D4O60343 1298 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 CXCL14O95715 111 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 PDHBP11177 359 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 TOP1P11387 765 aaKnown RBP11.23□□□□□ -0.61
SRSF5-216ENST00000556647 SRFP11831 508 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 GBP2P32456 591 aaPredicted RBP11.23□□□□□ -0.61
SRSF5-216ENST00000556647 CTDSPL2Q05D32 466 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 ZNF543Q08ER8 600 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 TMEM62Q0P6H9 643 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 NFX1Q12986 1120 aaKnown RBP11.23□□□□□ -0.61
SRSF5-216ENST00000556647 CEP85Q6P2H3 762 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 DCLRE1AQ6PJP8 1040 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 KCNT2Q6UVM3 1135 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 CYFIP1Q7L576 1253 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 CABP7Q86V35 215 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 DDX1Q92499 740 aaKnown RBP11.23□□□□□ -0.61
SRSF5-216ENST00000556647 PDCD2LQ9BRP1 358 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 UBA5Q9GZZ9 404 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 MAF1Q9H063 256 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 FAM49AQ9H0Q0 323 aaPredicted RBP11.23□□□□□ -0.61
SRSF5-216ENST00000556647 TMX1Q9H3N1 280 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 ZSCAN32Q9NX65 697 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 TUBE1Q9UJT0 475 aa11.23□□□□□ -0.61
SRSF5-216ENST00000556647 M0QZ92 97 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 GOLGA8HP0CJ92 632 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 FGFR1P11362 822 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 NOVP48745 357 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 IGBP1P78318 339 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 SP4Q02446 784 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 PPFIA1Q13136 1202 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 BMS1Q14692 1282 aaKnown RBP11.22□□□□□ -0.61
SRSF5-216ENST00000556647 PTPN14Q15678 1187 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 CDC37Q16543 378 aaPredicted RBP11.22□□□□□ -0.61
SRSF5-216ENST00000556647 TMEM266Q2M3C6 531 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 IER5Q5VY09 327 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 IL31Q6EBC2 164 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 UNQ6494/PRO21346Q6UXR6 183 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 GPR149Q86SP6 731 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 ZBTB44Q8NCP5 570 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 ZNF558Q96NG5 402 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 BCO2Q9BYV7 579 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 SPG21Q9NZD8 308 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 RAB23Q9ULC3 237 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.22□□□□□ -0.61
SRSF5-216ENST00000556647 MRPL11Q9Y3B7 192 aaKnown RBP11.22□□□□□ -0.61
SRSF5-216ENST00000556647 TRPV2Q9Y5S1 764 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 SQORQ9Y6N5 450 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 ASPMQ8IZT6 3477 aa11.22□□□□□ -0.61
SRSF5-216ENST00000556647 ANKRD11Q6UB99 2663 aaPredicted RBP11.22□□□□□ -0.61
SRSF5-216ENST00000556647 MIA3Q5JRA6 1907 aa11.21□□□□□ -0.61
SRSF5-216ENST00000556647 DOCK5Q9H7D0 1870 aa11.21□□□□□ -0.61
SRSF5-216ENST00000556647 DENND3A2RUS2 1198 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms