RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 MTERF2Q49AM1 385 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 Q4G0T1 1027 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 GALNT17Q6IS24 598 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 KRT25Q7Z3Z0 450 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 TMEM40Q8WWA1 233 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 SLC5A5Q92911 643 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 LMAN2LQ9H0V9 348 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 TMX1Q9H3N1 280 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 C1orf112Q9NSG2 853 aa11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 DDX25Q9UHL0 483 aaKnown RBP11.92□□□□□ -0.5
SPTLC2-205ENST00000556607 PLXNA4Q9HCM2 1894 aa11.91□□□□□ -0.5
SPTLC2-205ENST00000556607 SSTR3P32745 418 aaPredicted RBP11.91□□□□□ -0.5
SPTLC2-205ENST00000556607 ANKRD1Q15327 319 aa11.91□□□□□ -0.5
SPTLC2-205ENST00000556607 UGCGQ16739 394 aa11.91□□□□□ -0.5
SPTLC2-205ENST00000556607 LEXMQ3ZCV2 418 aa11.91□□□□□ -0.5
SPTLC2-205ENST00000556607 PTCRAQ6ISU1 281 aaPredicted RBP11.91□□□□□ -0.5
SPTLC2-205ENST00000556607 SLC24A5Q71RS6 500 aa11.91□□□□□ -0.5
SPTLC2-205ENST00000556607 FAM228AQ86W67 206 aa11.91□□□□□ -0.5
SPTLC2-205ENST00000556607 DAGLBQ8NCG7 672 aa11.91□□□□□ -0.5
SPTLC2-205ENST00000556607 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.91□□□□□ -0.5
SPTLC2-205ENST00000556607 MICAL1Q8TDZ2 1067 aa11.91□□□□□ -0.5
SPTLC2-205ENST00000556607 NLRP7Q8WX94 980 aa11.91□□□□□ -0.5
SPTLC2-205ENST00000556607 CLP1Q92989 425 aaKnown RBP11.91□□□□□ -0.5
SPTLC2-205ENST00000556607 SH2D3AQ9BRG2 576 aa11.91□□□□□ -0.5
SPTLC2-205ENST00000556607 PLVAPQ9BX97 442 aa11.91□□□□□ -0.5
SPTLC2-205ENST00000556607 RC3H2Q9HBD1 1191 aaKnown RBP11.91□□□□□ -0.5
SPTLC2-205ENST00000556607 RGS18Q9NS28 235 aa11.91□□□□□ -0.5
SPTLC2-205ENST00000556607 TPCN1Q9ULQ1 816 aa11.91□□□□□ -0.5
SPTLC2-205ENST00000556607 TRANK1O15050 2925 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 XIRP2A4UGR9 3374 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 DDX11L8A8MPP1 907 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 EDIL3O43854 480 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 ZNF862O60290 1169 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 CCNT1O60563 726 aaKnown RBP11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 GPR32O75388 356 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 PSMD10O75832 226 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 IL9P15248 144 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 DNM2P50570 870 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 AK2P54819 239 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 CLUL1Q15846 466 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 FAM102BQ5T8I3 360 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 PIK3AP1Q6ZUJ8 805 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 NEK8Q86SG6 692 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 KLHL23Q8NBE8 558 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 RNF169Q8NCN4 708 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 POF1BQ8WVV4 589 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 WASF1Q92558 559 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 P2RX5Q93086 422 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 PPP2R3CQ969Q6 453 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 PABPC5Q96DU9 382 aaKnown RBP11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 PHF20Q9BVI0 1012 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 ATP6V0A4Q9HBG4 840 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 AAASQ9NRG9 546 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 ORC3Q9UBD5 711 aaPredicted RBP11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 PLAGL2Q9UPG8 496 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 PCDHB12Q9Y5F1 795 aa11.9□□□□□ -0.5
SPTLC2-205ENST00000556607 TMEM150BA6NC51 233 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 M0R2N6 131 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 NCK2O43639 380 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 PFKFB2O60825 505 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 MMP1P03956 469 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 ITGB1P05556 798 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 LINC00271P0C7V0 271 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 FGFR1P11362 822 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 COL9A1P20849 921 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 FGFR4P22455 802 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 FOSBP53539 338 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 PUS10Q3MIT2 529 aaKnown RBP11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 NAALADL2Q58DX5 795 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 XKR3Q5GH77 459 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 MOXD1Q6UVY6 613 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 THNSL1Q8IYQ7 743 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 ABI1Q8IZP0 508 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 FAM177A1Q8N128 213 aaPredicted RBP11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 RDM1Q8NG50 284 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 BRMS1Q9HCU9 246 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 GJB4Q9NTQ9 266 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 FAM50BQ9Y247 325 aa11.89□□□□□ -0.51
SPTLC2-205ENST00000556607 STK36Q9NRP7 1315 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 CYP3A7-CYP3A51PA0A087WV96 503 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 C9IYK1 514 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 SLC37A4O43826 429 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 EIF5BO60841 1220 aaKnown RBP11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 BAG4O95429 457 aaKnown RBP11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 EIF4BP23588 611 aaKnown RBP11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 CYP3A7P24462 503 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 GTF2F1P35269 517 aaKnown RBP eCLIP11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 NDUFV1P49821 464 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 GPC3P51654 580 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 ANAPC15P60006 121 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 PSMC5P62195 406 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 HYAL1Q12794 435 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 NPY5RQ15761 445 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 ERICH6BQ5W0A0 696 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 FAM43BQ6ZT52 329 aaPredicted RBP11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 RBM23Q86U06 439 aaKnown RBP11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 CRIPAKQ8N1N5 446 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 ZNF710Q8N1W2 664 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 NECAB1Q8N987 351 aa11.88□□□□□ -0.51
SPTLC2-205ENST00000556607 ETNPPLQ8TBG4 499 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms