RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 PRKD1Q15139 912 aaPredicted RBP4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 TDRD10Q5VZ19 366 aaKnown RBP4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 IGFL4Q6B9Z1 124 aa4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 FAM126BQ8IXS8 530 aa4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 KLHL36Q8N4N3 616 aa4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 GIPC2Q8TF65 315 aa4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 ZDHHC15Q96MV8 337 aa4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 CRAMP1Q96RY5 1269 aa4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 MCMBPQ9BTE3 642 aa4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 AP5M1Q9H0R1 490 aa4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 NOL6Q9H6R4 1146 aaKnown RBP4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 ABT1Q9ULW3 272 aaKnown RBP4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 ZFR2Q9UPR6 939 aaKnown RBP4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 ZNF451Q9Y4E5 1061 aa4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 LTN1O94822 1766 aa4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 MYH14Q7Z406 1995 aaKnown RBP4.28□□□□□ -1.72
EFCAB11-210ENST00000556078 ANKRD33BA6NCL7 494 aa4.28□□□□□ -1.72
EFCAB11-210ENST00000556078 UNCXA6NJT0 531 aa4.28□□□□□ -1.72
EFCAB11-210ENST00000556078 SGSM2O43147 1006 aa4.28□□□□□ -1.72
EFCAB11-210ENST00000556078 CYP7B1O75881 506 aa4.28□□□□□ -1.72
EFCAB11-210ENST00000556078 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
EFCAB11-210ENST00000556078 LRCH2Q5VUJ6 765 aa4.28□□□□□ -1.72
EFCAB11-210ENST00000556078 DPY19L2P1Q6NXN4 242 aa4.28□□□□□ -1.72
EFCAB11-210ENST00000556078 NGDNQ8NEJ9 315 aaKnown RBP4.28□□□□□ -1.72
EFCAB11-210ENST00000556078 PLEKHO2Q8TD55 490 aa4.28□□□□□ -1.72
EFCAB11-210ENST00000556078 COPRSQ9NQ92 184 aa4.28□□□□□ -1.72
EFCAB11-210ENST00000556078 KIAA0100Q14667 2235 aaKnown RBP4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 A0A087X1B8 175 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 C7orf72A4D263 438 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 NPHS1O60500 1241 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 B4GALT4O60513 344 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 FUCA1P04066 466 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 PAMP19021 973 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 MCM4P33991 863 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 APOBRQ0VD83 1088 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 CR1LQ2VPA4 569 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 CST9Q5W186 159 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 CPNE8Q86YQ8 564 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 SLITRK4Q8IW52 837 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 SCUBE1Q8IWY4 988 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 SEC14L1Q92503 715 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 ZG16BQ96DA0 208 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 FAM161BQ96MY7 647 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 PRAM1Q96QH2 718 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 SEC61A2Q9H9S3 476 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 UBP1Q9NZI7 540 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 CDH23Q9H251 3354 aa4.27□□□□□ -1.73
EFCAB11-210ENST00000556078 ANKRD31Q8N7Z5 1873 aa4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 WDFY4Q6ZS81 3184 aa4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 NPHP3-ACAD11A0A0J9YXS1 232 aa4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 FAM86C2PA6NEL3 165 aa4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 SORBS3O60504 671 aa4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 SLC6A11P48066 632 aa4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 SEPHS1P49903 392 aa4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 MLLT6P55198 1093 aaPredicted RBP4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 NKX3-2P78367 333 aa4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 PTH1RQ03431 593 aa4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 TCEAL1Q15170 157 aa4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 NRN1LQ496H8 165 aa4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 EDAQ92838 391 aa4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 VOPP1Q96AW1 172 aa4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 TAF1DQ9H5J8 278 aaPredicted RBP4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 BACE2Q9Y5Z0 518 aa4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 NSD3Q9BZ95 1437 aa4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 COL11A2P13942 1736 aaPredicted RBP4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 ANKRD36BQ8N2N9 1353 aa4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 FAM208AQ9UK61 1670 aaKnown RBP4.26□□□□□ -1.73
EFCAB11-210ENST00000556078 POLR2AP24928 1970 aaKnown RBP4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 REV3LO60673 3130 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 C2orf71A6NGG8 1288 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 H0YGN5 161 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 STXBP3O00186 592 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 TRAF5O00463 557 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 CBFA2T2O43439 604 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 TP53P04637 393 aaPredicted RBP4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 ZNF16P17020 682 aaPredicted RBP4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 COL5A3P25940 1745 aaPredicted RBP4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 STAT5AP42229 794 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 IL12RB1P42701 662 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 CPSF1Q10570 1443 aaKnown RBP4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 NFATC3Q12968 1075 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 DALRD3Q5D0E6 543 aaKnown RBP4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 TCTN3Q6NUS6 607 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 Q7L0L9 218 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 CNTROBQ8N137 903 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 RNF34Q969K3 372 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 FAM122AQ96E09 287 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 CLIC6Q96NY7 704 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 WRNIP1Q96S55 665 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 TM9SF2Q99805 663 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 BARX1Q9HBU1 254 aaPredicted RBP4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 DDX21Q9NR30 783 aaKnown RBP eCLIP4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 FTSJ1Q9UET6 329 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 ADAMTS1Q9UHI8 967 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 ADAM29Q9UKF5 820 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 NUP155O75694 1391 aa4.25□□□□□ -1.73
EFCAB11-210ENST00000556078 PIK3C2GO75747 1445 aa4.24□□□□□ -1.73
EFCAB11-210ENST00000556078 SLX4Q8IY92 1834 aa4.24□□□□□ -1.73
EFCAB11-210ENST00000556078 KRTAP29-1A8MX34 341 aaPredicted RBP4.24□□□□□ -1.73
EFCAB11-210ENST00000556078 FOXS1O43638 330 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms