RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 SETD4Q9NVD3 440 aa8.46□□□□□ -1.06
PCNX4-211ENST00000555929 HDAC6Q9UBN7 1215 aa8.46□□□□□ -1.06
PCNX4-211ENST00000555929 PHF24Q9UPV7 400 aa8.46□□□□□ -1.06
PCNX4-211ENST00000555929 NOD1Q9Y239 953 aa8.46□□□□□ -1.06
PCNX4-211ENST00000555929 IGSF9BQ9UPX0 1349 aa8.46□□□□□ -1.06
PCNX4-211ENST00000555929 CENPFP49454 3210 aa8.46□□□□□ -1.06
PCNX4-211ENST00000555929 LRRC37A2A6NM11 1700 aa8.46□□□□□ -1.06
PCNX4-211ENST00000555929 A0A087X0B3 334 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 USO1O60763 962 aaKnown RBP8.45□□□□□ -1.06
PCNX4-211ENST00000555929 F2P00734 622 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 KRT18P05783 430 aaKnown RBP8.45□□□□□ -1.06
PCNX4-211ENST00000555929 PLA2G4BP0C869 781 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 MCM4P33991 863 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 UBE2HP62256 183 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 NKX3-2P78367 333 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 ZNF200P98182 395 aaPredicted RBP8.45□□□□□ -1.06
PCNX4-211ENST00000555929 RAD51AP2Q09MP3 1159 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 TBC1D8BQ0IIM8 1120 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 MCM6Q14566 821 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 GRIK4Q16099 956 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 TMEM119Q4V9L6 283 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 ZNF484Q5JVG2 852 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 CLEC17AQ6ZS10 378 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 ANO5Q75V66 913 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 SV2BQ7L1I2 683 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 KCNK18Q7Z418 384 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 NECAB2Q7Z6G3 386 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 CEP57L1Q8IYX8 460 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 METTL13Q8N6R0 699 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 IQUBQ8NA54 791 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 ANKLE1Q8NAG6 615 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 TMEM87AQ8NBN3 555 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 STAMQ92783 540 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 ZBTB10Q96DT7 871 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 ZBED2Q9BTP6 218 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 BHMT2Q9H2M3 363 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 POLD4Q9HCU8 107 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 LMBRD1Q9NUN5 540 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 SERTAD1Q9UHV2 236 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 ATP11BQ9Y2G3 1177 aa8.45□□□□□ -1.06
PCNX4-211ENST00000555929 RRN3P2A6NIE6 340 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 ARVCFO00192 962 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 HAS3O00219 553 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 PQBP1O60828 265 aaKnown RBP8.44□□□□□ -1.06
PCNX4-211ENST00000555929 ZNF202O95125 648 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 LYPLA2O95372 231 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 EYA4O95677 639 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 GNAT1P11488 350 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 LIG1P18858 919 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 MUTP22033 750 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 KLRC1P26715 233 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 AFMP43652 599 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 POLGP54098 1239 aaPredicted RBP8.44□□□□□ -1.06
PCNX4-211ENST00000555929 HYIQ5T013 277 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 FAM102BQ5T8I3 360 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 PADI6Q6TGC4 694 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 SLC39A5Q6ZMH5 540 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 GPBP1Q86WP2 473 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 GRAMD1CQ8IYS0 662 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 LARP4BQ92615 738 aaKnown RBP8.44□□□□□ -1.06
PCNX4-211ENST00000555929 RAD54LQ92698 747 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 PPP1R16BQ96T49 567 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 NIFKQ9BYG3 293 aaKnown RBP8.44□□□□□ -1.06
PCNX4-211ENST00000555929 ADAM33Q9BZ11 813 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 FAM49AQ9H0Q0 323 aaPredicted RBP8.44□□□□□ -1.06
PCNX4-211ENST00000555929 TRPV6Q9H1D0 765 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 CYP26B1Q9NR63 512 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 ANKEF1Q9NU02 776 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 TRMT13Q9NUP7 481 aaKnown RBP8.44□□□□□ -1.06
PCNX4-211ENST00000555929 GRIN2DO15399 1336 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 NRCAMQ92823 1304 aa8.44□□□□□ -1.06
PCNX4-211ENST00000555929 KIAA1217Q5T5P2 1943 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 NPHP3-ACAD11A0A0J9YXS1 232 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 TREHO43280 583 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 SLC26A4O43511 780 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 KINO60870 393 aaKnown RBP8.43□□□□□ -1.06
PCNX4-211ENST00000555929 NR1I2O75469 434 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 STBD1O95210 358 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 CYP2C9P11712 490 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 XRCC6P12956 609 aaKnown RBP eCLIP8.43□□□□□ -1.06
PCNX4-211ENST00000555929 RARRES1P49788 294 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 DNM2P50570 870 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 FAM160A1Q05DH4 1040 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 PTGISQ16647 500 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 LONRF3Q496Y0 759 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 GDF6Q6KF10 455 aaPredicted RBP8.43□□□□□ -1.06
PCNX4-211ENST00000555929 EFCAB12Q6NXP0 572 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 NFRKBQ6P4R8 1299 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 MTHFD1LQ6UB35 978 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 DYMQ7RTS9 669 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 LRRC71Q8N4P6 559 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 RETREG2Q8NC44 543 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 CNNM3Q8NE01 707 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 LRRC15Q8TF66 581 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 LMBR1Q8WVP7 490 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 SLC7A3Q8WY07 619 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 TMEM143Q96AN5 459 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 PYM1Q9BRP8 204 aaKnown RBP8.43□□□□□ -1.06
PCNX4-211ENST00000555929 ZHX3Q9H4I2 956 aa8.43□□□□□ -1.06
PCNX4-211ENST00000555929 ATP6V0A4Q9HBG4 840 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms