RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 NPAS4Q8IUM7 802 aa20.69■□□□□ 0.9
NEDD1-208ENST00000555806 TMEM192Q8IY95 271 aa20.69■□□□□ 0.9
NEDD1-208ENST00000555806 ATXN2LQ8WWM7 1075 aaKnown RBP20.69■□□□□ 0.9
NEDD1-208ENST00000555806 TNFRSF25Q93038 417 aa20.69■□□□□ 0.9
NEDD1-208ENST00000555806 SCLT1Q96NL6 688 aa20.69■□□□□ 0.9
NEDD1-208ENST00000555806 TMX1Q9H3N1 280 aa20.69■□□□□ 0.9
NEDD1-208ENST00000555806 LMCD1Q9NZU5 365 aa20.69■□□□□ 0.9
NEDD1-208ENST00000555806 ST3GAL5Q9UNP4 418 aa20.69■□□□□ 0.9
NEDD1-208ENST00000555806 TTC3P53804 2025 aa20.68■□□□□ 0.9
NEDD1-208ENST00000555806 DENND3A2RUS2 1198 aa20.68■□□□□ 0.9
NEDD1-208ENST00000555806 TMEM150BA6NC51 233 aa20.68■□□□□ 0.9
NEDD1-208ENST00000555806 DDX11L8A8MPP1 907 aa20.68■□□□□ 0.9
NEDD1-208ENST00000555806 BTBD18B2RXH4 712 aa20.68■□□□□ 0.9
NEDD1-208ENST00000555806 EML1O00423 815 aa20.68■□□□□ 0.9
NEDD1-208ENST00000555806 TBX3O15119 743 aa20.68■□□□□ 0.9
NEDD1-208ENST00000555806 GPR32O75388 356 aa20.68■□□□□ 0.9
NEDD1-208ENST00000555806 BAG4O95429 457 aaKnown RBP20.68■□□□□ 0.9
NEDD1-208ENST00000555806 STAG3L1P0CL83 205 aa20.68■□□□□ 0.9
NEDD1-208ENST00000555806 NLRP11P59045 1033 aaKnown RBP20.68■□□□□ 0.9
NEDD1-208ENST00000555806 PSMC5P62195 406 aa20.68■□□□□ 0.9
NEDD1-208ENST00000555806 BTG3Q14201 252 aaPredicted RBP20.68■□□□□ 0.9
NEDD1-208ENST00000555806 TJAP1Q5JTD0 557 aa20.68■□□□□ 0.9
NEDD1-208ENST00000555806 LINC01465Q8N7H1 131 aa20.68■□□□□ 0.9
NEDD1-208ENST00000555806 ZSCAN31Q96LW9 406 aaPredicted RBP20.68■□□□□ 0.9
NEDD1-208ENST00000555806 KIF2CQ99661 725 aa20.68■□□□□ 0.9
NEDD1-208ENST00000555806 NIFKQ9BYG3 293 aaKnown RBP20.68■□□□□ 0.9
NEDD1-208ENST00000555806 LRFN2Q9ULH4 789 aa20.68■□□□□ 0.9
NEDD1-208ENST00000555806 NLRC5Q86WI3 1866 aa20.68■□□□□ 0.9
NEDD1-208ENST00000555806 DKC1O60832 514 aaKnown RBP eCLIP20.67■□□□□ 0.9
NEDD1-208ENST00000555806 CTNNB1P35222 781 aa20.67■□□□□ 0.9
NEDD1-208ENST00000555806 GUCY1B3Q02153 619 aa20.67■□□□□ 0.9
NEDD1-208ENST00000555806 GPM6BQ13491 265 aa20.67■□□□□ 0.9
NEDD1-208ENST00000555806 SAFBQ15424 915 aaKnown RBP eCLIP20.67■□□□□ 0.9
NEDD1-208ENST00000555806 TARBP2Q15633 366 aaKnown RBP20.67■□□□□ 0.9
NEDD1-208ENST00000555806 NCAPH2Q6IBW4 605 aa20.67■□□□□ 0.9
NEDD1-208ENST00000555806 FAM228AQ86W67 206 aa20.67■□□□□ 0.9
NEDD1-208ENST00000555806 SLFN12Q8IYM2 578 aa20.67■□□□□ 0.9
NEDD1-208ENST00000555806 SYMPKQ92797 1274 aaKnown RBP20.67■□□□□ 0.9
NEDD1-208ENST00000555806 HAS1Q92839 578 aa20.67■□□□□ 0.9
NEDD1-208ENST00000555806 ZNF668Q96K58 619 aaPredicted RBP20.67■□□□□ 0.9
NEDD1-208ENST00000555806 SH2D3AQ9BRG2 576 aa20.67■□□□□ 0.9
NEDD1-208ENST00000555806 RC3H2Q9HBD1 1191 aaKnown RBP20.67■□□□□ 0.9
NEDD1-208ENST00000555806 RALGAPA2Q2PPJ7 1873 aa20.67■□□□□ 0.9
NEDD1-208ENST00000555806 MGEA5O60502 916 aa20.66■□□□□ 0.9
NEDD1-208ENST00000555806 DGKIO75912 1065 aa20.66■□□□□ 0.9
NEDD1-208ENST00000555806 QARSP47897 775 aaKnown RBP20.66■□□□□ 0.9
NEDD1-208ENST00000555806 SARSP49591 514 aaKnown RBP20.66■□□□□ 0.9
NEDD1-208ENST00000555806 MRPS5P82675 430 aaKnown RBP20.66■□□□□ 0.9
NEDD1-208ENST00000555806 ZNF710Q8N1W2 664 aa20.66■□□□□ 0.9
NEDD1-208ENST00000555806 IL27Q8NEV9 243 aa20.66■□□□□ 0.9
NEDD1-208ENST00000555806 ZNF689Q96CS4 500 aaPredicted RBP20.66■□□□□ 0.9
NEDD1-208ENST00000555806 ADAM2Q99965 735 aa20.66■□□□□ 0.9
NEDD1-208ENST00000555806 LLPHQ9BRT6 129 aaKnown RBP20.66■□□□□ 0.9
NEDD1-208ENST00000555806 SH2B1Q9NRF2 756 aaPredicted RBP20.66■□□□□ 0.9
NEDD1-208ENST00000555806 RWDD3Q9Y3V2 267 aa20.66■□□□□ 0.9
NEDD1-208ENST00000555806 H3BNC9 293 aa20.65■□□□□ 0.9
NEDD1-208ENST00000555806 STBD1O95210 358 aa20.65■□□□□ 0.9
NEDD1-208ENST00000555806 P4HBP07237 508 aaKnown RBP20.65■□□□□ 0.9
NEDD1-208ENST00000555806 GPC3P51654 580 aa20.65■□□□□ 0.9
NEDD1-208ENST00000555806 CALCRLQ16602 461 aa20.65■□□□□ 0.9
NEDD1-208ENST00000555806 PTPROQ16827 1216 aa20.65■□□□□ 0.9
NEDD1-208ENST00000555806 PAN2Q504Q3 1202 aaKnown RBP20.65■□□□□ 0.9
NEDD1-208ENST00000555806 PLA2G4FQ68DD2 849 aa20.65■□□□□ 0.9
NEDD1-208ENST00000555806 FAM43BQ6ZT52 329 aaPredicted RBP20.65■□□□□ 0.9
NEDD1-208ENST00000555806 NLRP7Q8WX94 980 aa20.65■□□□□ 0.9
NEDD1-208ENST00000555806 C8orf76Q96K31 380 aa20.65■□□□□ 0.9
NEDD1-208ENST00000555806 ASB2Q96Q27 587 aa20.65■□□□□ 0.9
NEDD1-208ENST00000555806 ADAMTS10Q9H324 1103 aa20.65■□□□□ 0.9
NEDD1-208ENST00000555806 C1orf112Q9NSG2 853 aa20.65■□□□□ 0.9
NEDD1-208ENST00000555806 PCDHB7Q9Y5E2 793 aa20.65■□□□□ 0.9
NEDD1-208ENST00000555806 RBM25P49756 843 aaKnown RBP20.64■□□□□ 0.89
NEDD1-208ENST00000555806 DNM2P50570 870 aa20.64■□□□□ 0.89
NEDD1-208ENST00000555806 HMGN5P82970 282 aaKnown RBP20.64■□□□□ 0.89
NEDD1-208ENST00000555806 DRP2Q13474 957 aa20.64■□□□□ 0.89
NEDD1-208ENST00000555806 EPHA7Q15375 998 aa20.64■□□□□ 0.89
NEDD1-208ENST00000555806 ANO5Q75V66 913 aa20.64■□□□□ 0.89
NEDD1-208ENST00000555806 CMTR2Q8IYT2 770 aaKnown RBP20.64■□□□□ 0.89
NEDD1-208ENST00000555806 FAM184AQ8NB25 1140 aa20.64■□□□□ 0.89
NEDD1-208ENST00000555806 MRPL38Q96DV4 380 aaKnown RBP20.64■□□□□ 0.89
NEDD1-208ENST00000555806 LXNQ9BS40 222 aa20.64■□□□□ 0.89
NEDD1-208ENST00000555806 UPF2Q9HAU5 1272 aaKnown RBP20.64■□□□□ 0.89
NEDD1-208ENST00000555806 RGS18Q9NS28 235 aa20.64■□□□□ 0.89
NEDD1-208ENST00000555806 RNF216Q9NWF9 866 aaPredicted RBP20.64■□□□□ 0.89
NEDD1-208ENST00000555806 NEMFO60524 1076 aa20.63■□□□□ 0.89
NEDD1-208ENST00000555806 ATP2B1P20020 1258 aa20.63■□□□□ 0.89
NEDD1-208ENST00000555806 EIF4BP23588 611 aaKnown RBP20.63■□□□□ 0.89
NEDD1-208ENST00000555806 BMPR1AP36894 532 aa20.63■□□□□ 0.89
NEDD1-208ENST00000555806 GATMP50440 423 aa20.63■□□□□ 0.89
NEDD1-208ENST00000555806 TFF2Q03403 129 aa20.63■□□□□ 0.89
NEDD1-208ENST00000555806 RABEP1Q15276 862 aa20.63■□□□□ 0.89
NEDD1-208ENST00000555806 SLC24A5Q71RS6 500 aa20.63■□□□□ 0.89
NEDD1-208ENST00000555806 CRIPAKQ8N1N5 446 aa20.63■□□□□ 0.89
NEDD1-208ENST00000555806 DYDC2Q96IM9 177 aa20.63■□□□□ 0.89
NEDD1-208ENST00000555806 CEP89Q96ST8 783 aa20.63■□□□□ 0.89
NEDD1-208ENST00000555806 JPH2Q9BR39 696 aaPredicted RBP20.63■□□□□ 0.89
NEDD1-208ENST00000555806 C11orf84Q9BUA3 381 aaPredicted RBP20.63■□□□□ 0.89
NEDD1-208ENST00000555806 CYP26B1Q9NR63 512 aa20.63■□□□□ 0.89
NEDD1-208ENST00000555806 RGL1Q9NZL6 768 aa20.63■□□□□ 0.89
NEDD1-208ENST00000555806 COG5Q9UP83 839 aa20.63■□□□□ 0.89
NEDD1-208ENST00000555806 MRPL42Q9Y6G3 142 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms