RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 RMDN3Q96TC7 470 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 PDCD2LQ9BRP1 358 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 PXMP2Q9NR77 195 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 AGPAT3Q9NRZ7 376 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 CTDP1Q9Y5B0 961 aaPredicted RBP26.61■■□□□ 1.85
TMEM260-207ENST00000555497 A0A087X0T9 212 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 PPP1R37O75864 691 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 FAM228BP0C875 321 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 KLHL30Q0D2K2 578 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 ASIC2Q16515 512 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 UGCGQ16739 394 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 DCAF15Q66K64 600 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 SH2D3AQ9BRG2 576 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 ARFGAP3Q9NP61 516 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 ST7Q9NRC1 585 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 DMAC2Q9NW81 257 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 JRKLQ9Y4A0 524 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 SAMM50Q9Y512 469 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 CCDC151A5D8V7 595 aa26.6■■□□□ 1.85
TMEM260-207ENST00000555497 TMEM150BA6NC51 233 aa26.6■■□□□ 1.85
TMEM260-207ENST00000555497 PSMC2P35998 433 aaKnown RBP26.6■■□□□ 1.85
TMEM260-207ENST00000555497 TUBB4BP68371 445 aa26.6■■□□□ 1.85
TMEM260-207ENST00000555497 ZNF280CQ8ND82 737 aa26.6■■□□□ 1.85
TMEM260-207ENST00000555497 RBM46Q8TBY0 533 aaKnown RBP26.6■■□□□ 1.85
TMEM260-207ENST00000555497 TRPM4Q8TD43 1214 aa26.6■■□□□ 1.85
TMEM260-207ENST00000555497 CD2APQ9Y5K6 639 aa26.6■■□□□ 1.85
TMEM260-207ENST00000555497 UBE4BO95155 1302 aa26.6■■□□□ 1.85
TMEM260-207ENST00000555497 RARRES1P49788 294 aa26.59■■□□□ 1.85
TMEM260-207ENST00000555497 PLS1Q14651 629 aa26.59■■□□□ 1.85
TMEM260-207ENST00000555497 R3HDM1Q15032 1099 aaKnown RBP26.59■■□□□ 1.85
TMEM260-207ENST00000555497 BRD3Q15059 726 aa26.59■■□□□ 1.85
TMEM260-207ENST00000555497 SLC18A3Q16572 532 aa26.59■■□□□ 1.85
TMEM260-207ENST00000555497 QARSP47897 775 aaKnown RBP26.59■■□□□ 1.85
TMEM260-207ENST00000555497 CYP2J2P51589 502 aa26.59■■□□□ 1.85
TMEM260-207ENST00000555497 BAATQ14032 418 aaPredicted RBP26.59■■□□□ 1.85
TMEM260-207ENST00000555497 GJB7Q6PEY0 223 aa26.59■■□□□ 1.85
TMEM260-207ENST00000555497 GBP6Q6ZN66 633 aa26.59■■□□□ 1.85
TMEM260-207ENST00000555497 SAMD3Q8N6K7 520 aa26.59■■□□□ 1.85
TMEM260-207ENST00000555497 REPS2Q8NFH8 660 aa26.59■■□□□ 1.85
TMEM260-207ENST00000555497 GBP3Q9H0R5 595 aa26.59■■□□□ 1.85
TMEM260-207ENST00000555497 RNF146Q9NTX7 359 aa26.59■■□□□ 1.85
TMEM260-207ENST00000555497 ADAMTS1Q9UHI8 967 aa26.59■■□□□ 1.85
TMEM260-207ENST00000555497 SNX12Q9UMY4 172 aa26.59■■□□□ 1.85
TMEM260-207ENST00000555497 GCNT4Q9P109 453 aa26.58■■□□□ 1.85
TMEM260-207ENST00000555497 DBR1Q9UK59 544 aaKnown RBP26.58■■□□□ 1.85
TMEM260-207ENST00000555497 PHIPQ8WWQ0 1821 aa26.58■■□□□ 1.85
TMEM260-207ENST00000555497 POTEB2H3BUK9 544 aa26.58■■□□□ 1.85
TMEM260-207ENST00000555497 BUB1O43683 1085 aa26.58■■□□□ 1.85
TMEM260-207ENST00000555497 CCNE2O96020 404 aa26.58■■□□□ 1.85
TMEM260-207ENST00000555497 HMGCS2P54868 508 aa26.58■■□□□ 1.85
TMEM260-207ENST00000555497 VSNL1P62760 191 aa26.58■■□□□ 1.85
TMEM260-207ENST00000555497 PTK2Q05397 1052 aa26.58■■□□□ 1.85
TMEM260-207ENST00000555497 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.58■■□□□ 1.85
TMEM260-207ENST00000555497 FUT8Q9BYC5 575 aa26.58■■□□□ 1.85
TMEM260-207ENST00000555497 TBC1D22BQ9NU19 505 aa26.58■■□□□ 1.85
TMEM260-207ENST00000555497 LONRF2Q1L5Z9 754 aa26.57■■□□□ 1.84
TMEM260-207ENST00000555497 ARHGEF16Q5VV41 709 aa26.57■■□□□ 1.84
TMEM260-207ENST00000555497 STXBP4Q6ZWJ1 553 aa26.57■■□□□ 1.84
TMEM260-207ENST00000555497 ZNF571Q7Z3V5 609 aaPredicted RBP26.57■■□□□ 1.84
TMEM260-207ENST00000555497 PACSIN1Q9BY11 444 aa26.57■■□□□ 1.84
TMEM260-207ENST00000555497 PICK1Q9NRD5 415 aa26.57■■□□□ 1.84
TMEM260-207ENST00000555497 HS2ST1Q7LGA3 356 aa26.57■■□□□ 1.84
TMEM260-207ENST00000555497 COG1Q8WTW3 980 aa26.57■■□□□ 1.84
TMEM260-207ENST00000555497 SPAG5Q96R06 1193 aa26.57■■□□□ 1.84
TMEM260-207ENST00000555497 MKNK1Q9BUB5 465 aa26.57■■□□□ 1.84
TMEM260-207ENST00000555497 ATP8B1O43520 1251 aa26.56■■□□□ 1.84
TMEM260-207ENST00000555497 LYPLA2O95372 231 aa26.56■■□□□ 1.84
TMEM260-207ENST00000555497 TRMT1LQ7Z2T5 733 aaKnown RBP26.56■■□□□ 1.84
TMEM260-207ENST00000555497 CREG2Q8IUH2 290 aa26.56■■□□□ 1.84
TMEM260-207ENST00000555497 NLGN2Q8NFZ4 835 aa26.56■■□□□ 1.84
TMEM260-207ENST00000555497 GTPBP10A4D1E9 387 aaKnown RBP26.55■■□□□ 1.84
TMEM260-207ENST00000555497 K7ENM7 598 aa26.55■■□□□ 1.84
TMEM260-207ENST00000555497 NCK2O43639 380 aa26.55■■□□□ 1.84
TMEM260-207ENST00000555497 JAM2P57087 298 aa26.55■■□□□ 1.84
TMEM260-207ENST00000555497 AS3MTQ9HBK9 375 aa26.55■■□□□ 1.84
TMEM260-207ENST00000555497 TESPA1A2RU30 521 aaPredicted RBP26.55■■□□□ 1.84
TMEM260-207ENST00000555497 TISP43B9A030 160 aa26.55■■□□□ 1.84
TMEM260-207ENST00000555497 FDX1P10109 184 aa26.55■■□□□ 1.84
TMEM260-207ENST00000555497 KLRC1P26715 233 aa26.55■■□□□ 1.84
TMEM260-207ENST00000555497 YWHABP31946 246 aaKnown RBP26.55■■□□□ 1.84
TMEM260-207ENST00000555497 BEND6Q5SZJ8 279 aaPredicted RBP26.55■■□□□ 1.84
TMEM260-207ENST00000555497 IQCEQ6IPM2 695 aa26.55■■□□□ 1.84
TMEM260-207ENST00000555497 NFRKBQ6P4R8 1299 aa26.55■■□□□ 1.84
TMEM260-207ENST00000555497 HNRNPLLQ8WVV9 542 aaKnown RBP26.55■■□□□ 1.84
TMEM260-207ENST00000555497 RNF216Q9NWF9 866 aaPredicted RBP26.55■■□□□ 1.84
TMEM260-207ENST00000555497 TRIM49P0CI25 452 aa26.54■■□□□ 1.84
TMEM260-207ENST00000555497 TRIM49CP0CI26 452 aa26.54■■□□□ 1.84
TMEM260-207ENST00000555497 CBWD6Q4V339 395 aa26.54■■□□□ 1.84
TMEM260-207ENST00000555497 CBWD3Q5JTY5 395 aa26.54■■□□□ 1.84
TMEM260-207ENST00000555497 CBWD5Q5RIA9 395 aa26.54■■□□□ 1.84
TMEM260-207ENST00000555497 NOX5Q96PH1 765 aa26.54■■□□□ 1.84
TMEM260-207ENST00000555497 ALS2CR12Q96Q35 445 aa26.54■■□□□ 1.84
TMEM260-207ENST00000555497 ABCB6Q9NP58 842 aa26.54■■□□□ 1.84
TMEM260-207ENST00000555497 FBXL5Q9UKA1 691 aa26.54■■□□□ 1.84
TMEM260-207ENST00000555497 ZNF214Q9UL59 606 aaPredicted RBP26.54■■□□□ 1.84
TMEM260-207ENST00000555497 ADAMTS5Q9UNA0 930 aa26.54■■□□□ 1.84
TMEM260-207ENST00000555497 BACH1O14867 736 aa26.54■■□□□ 1.84
TMEM260-207ENST00000555497 DSG3P32926 999 aa26.54■■□□□ 1.84
TMEM260-207ENST00000555497 FMO5P49326 533 aa26.54■■□□□ 1.84
TMEM260-207ENST00000555497 CKAP4Q07065 602 aaKnown RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms