RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 CERS4Q9HA82 394 aa15.36■□□□□ 0.05
SNX6-203ENST00000555416 PADI3Q9ULW8 664 aa15.36■□□□□ 0.05
SNX6-203ENST00000555416 NOC2LQ9Y3T9 749 aaKnown RBP15.36■□□□□ 0.05
SNX6-203ENST00000555416 A0A087WWV3 80 aa15.35■□□□□ 0.05
SNX6-203ENST00000555416 RFXAPO00287 272 aa15.35■□□□□ 0.05
SNX6-203ENST00000555416 EFCAB14O75071 495 aa15.35■□□□□ 0.05
SNX6-203ENST00000555416 BAG4O95429 457 aaKnown RBP15.35■□□□□ 0.05
SNX6-203ENST00000555416 P4HBP07237 508 aaKnown RBP15.35■□□□□ 0.05
SNX6-203ENST00000555416 MCM2P49736 904 aa15.35■□□□□ 0.05
SNX6-203ENST00000555416 CYP4A11Q02928 519 aa15.35■□□□□ 0.05
SNX6-203ENST00000555416 C4orf32Q8N8J7 132 aa15.35■□□□□ 0.05
SNX6-203ENST00000555416 APBB2Q92870 758 aa15.35■□□□□ 0.05
SNX6-203ENST00000555416 OSMRQ99650 979 aa15.35■□□□□ 0.05
SNX6-203ENST00000555416 EIF2AK1Q9BQI3 630 aaKnown RBP15.35■□□□□ 0.05
SNX6-203ENST00000555416 LXNQ9BS40 222 aa15.35■□□□□ 0.05
SNX6-203ENST00000555416 ADAMTS10Q9H324 1103 aa15.35■□□□□ 0.05
SNX6-203ENST00000555416 SUGCTQ9HAC7 445 aa15.35■□□□□ 0.05
SNX6-203ENST00000555416 PCDHA12Q9UN75 941 aa15.35■□□□□ 0.05
SNX6-203ENST00000555416 CEP131Q9UPN4 1083 aa15.35■□□□□ 0.05
SNX6-203ENST00000555416 PRUNE2Q8WUY3 3088 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 IGKV6-21A0A0C4DH24 114 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 POTEMA6NI47 508 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 M0QZ92 97 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 ENPP3O14638 875 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 MAGEB2O15479 319 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 MGEA5O60502 916 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 SLITRK3O94933 977 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 UPP2O95045 317 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 AMHP03971 560 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 TBC1D8BQ0IIM8 1120 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 CUL4AQ13619 759 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 TTC38Q5R3I4 469 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 IL27Q8NEV9 243 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 TOP1MTQ969P6 601 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 HSD17B14Q9BPX1 270 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 ZBED2Q9BTP6 218 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 ERVK-5Q9HDB9 667 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 AKT3Q9Y243 479 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 SQORQ9Y6N5 450 aa15.34■□□□□ 0.05
SNX6-203ENST00000555416 COL4A6Q14031 1691 aa15.33■□□□□ 0.04
SNX6-203ENST00000555416 RPLP2P05387 115 aaKnown RBP15.33■□□□□ 0.04
SNX6-203ENST00000555416 CRYBB1P53674 252 aaPredicted RBP15.33■□□□□ 0.04
SNX6-203ENST00000555416 NLRP11P59045 1033 aaKnown RBP15.33■□□□□ 0.04
SNX6-203ENST00000555416 HTRA4P83105 476 aaPredicted RBP15.33■□□□□ 0.04
SNX6-203ENST00000555416 FAM228AQ86W67 206 aa15.33■□□□□ 0.04
SNX6-203ENST00000555416 TPH2Q8IWU9 490 aa15.33■□□□□ 0.04
SNX6-203ENST00000555416 C4orf19Q8IY42 314 aa15.33■□□□□ 0.04
SNX6-203ENST00000555416 RAD9AQ99638 391 aa15.33■□□□□ 0.04
SNX6-203ENST00000555416 CYP26B1Q9NR63 512 aa15.33■□□□□ 0.04
SNX6-203ENST00000555416 BMP2KQ9NSY1 1161 aaPredicted RBP15.33■□□□□ 0.04
SNX6-203ENST00000555416 SMC3Q9UQE7 1217 aa15.33■□□□□ 0.04
SNX6-203ENST00000555416 PCDHB6Q9Y5E3 794 aa15.33■□□□□ 0.04
SNX6-203ENST00000555416 TRANK1O15050 2925 aa15.33■□□□□ 0.04
SNX6-203ENST00000555416 LINC01553A4QN01 128 aa15.32■□□□□ 0.04
SNX6-203ENST00000555416 CSDE1O75534 798 aaKnown RBP15.32■□□□□ 0.04
SNX6-203ENST00000555416 SPATA31C1P0DKV0 1188 aa15.32■□□□□ 0.04
SNX6-203ENST00000555416 FOSL2P15408 326 aa15.32■□□□□ 0.04
SNX6-203ENST00000555416 GPC3P51654 580 aa15.32■□□□□ 0.04
SNX6-203ENST00000555416 NFX1Q12986 1120 aaKnown RBP15.32■□□□□ 0.04
SNX6-203ENST00000555416 PAK2Q13177 524 aa15.32■□□□□ 0.04
SNX6-203ENST00000555416 GNL2Q13823 731 aaKnown RBP15.32■□□□□ 0.04
SNX6-203ENST00000555416 MCTP1Q6DN14 999 aa15.32■□□□□ 0.04
SNX6-203ENST00000555416 CRIPAKQ8N1N5 446 aa15.32■□□□□ 0.04
SNX6-203ENST00000555416 USP38Q8NB14 1042 aa15.32■□□□□ 0.04
SNX6-203ENST00000555416 REV3LO60673 3130 aa15.32■□□□□ 0.04
SNX6-203ENST00000555416 TTC3P53804 2025 aa15.31■□□□□ 0.04
SNX6-203ENST00000555416 MAFO75444 373 aaPredicted RBP15.31■□□□□ 0.04
SNX6-203ENST00000555416 RPS6KA5O75582 802 aa15.31■□□□□ 0.04
SNX6-203ENST00000555416 OR52Z1P0C646 297 aa15.31■□□□□ 0.04
SNX6-203ENST00000555416 FGFR4P22455 802 aa15.31■□□□□ 0.04
SNX6-203ENST00000555416 YWHABP31946 246 aaKnown RBP15.31■□□□□ 0.04
SNX6-203ENST00000555416 TECP42680 631 aa15.31■□□□□ 0.04
SNX6-203ENST00000555416 TRAPPC10P48553 1259 aa15.31■□□□□ 0.04
SNX6-203ENST00000555416 IL17AQ16552 155 aa15.31■□□□□ 0.04
SNX6-203ENST00000555416 KSR1Q8IVT5 923 aa15.31■□□□□ 0.04
SNX6-203ENST00000555416 SP7Q8TDD2 431 aaPredicted RBP15.31■□□□□ 0.04
SNX6-203ENST00000555416 ARNTL2Q8WYA1 636 aa15.31■□□□□ 0.04
SNX6-203ENST00000555416 CEP170P1Q96L14 293 aa15.31■□□□□ 0.04
SNX6-203ENST00000555416 MAP7D2Q96T17 732 aa15.31■□□□□ 0.04
SNX6-203ENST00000555416 ZSWIM4Q9H7M6 989 aa15.31■□□□□ 0.04
SNX6-203ENST00000555416 ST3GAL5Q9UNP4 418 aa15.31■□□□□ 0.04
SNX6-203ENST00000555416 MED24O75448 989 aa15.3■□□□□ 0.04
SNX6-203ENST00000555416 LYPLA2O95372 231 aa15.3■□□□□ 0.04
SNX6-203ENST00000555416 TMOD1P28289 359 aa15.3■□□□□ 0.04
SNX6-203ENST00000555416 ARID2Q68CP9 1835 aa15.3■□□□□ 0.04
SNX6-203ENST00000555416 MAFAQ8NHW3 353 aaPredicted RBP15.3■□□□□ 0.04
SNX6-203ENST00000555416 PIGOQ8TEQ8 1089 aa15.3■□□□□ 0.04
SNX6-203ENST00000555416 TMEM143Q96AN5 459 aa15.3■□□□□ 0.04
SNX6-203ENST00000555416 C17orf80Q9BSJ5 609 aa15.3■□□□□ 0.04
SNX6-203ENST00000555416 TSPYL2Q9H2G4 693 aaPredicted RBP15.3■□□□□ 0.04
SNX6-203ENST00000555416 DHX33Q9H6R0 707 aaKnown RBP15.3■□□□□ 0.04
SNX6-203ENST00000555416 RC3H2Q9HBD1 1191 aaKnown RBP15.3■□□□□ 0.04
SNX6-203ENST00000555416 SUCLA2Q9P2R7 463 aaPredicted RBP15.3■□□□□ 0.04
SNX6-203ENST00000555416 MTUS1Q9ULD2 1270 aa15.3■□□□□ 0.04
SNX6-203ENST00000555416 NOL7Q9UMY1 257 aaKnown RBP15.3■□□□□ 0.04
SNX6-203ENST00000555416 KIF3AQ9Y496 699 aa15.3■□□□□ 0.04
SNX6-203ENST00000555416 INSL6Q9Y581 213 aa15.3■□□□□ 0.04
SNX6-203ENST00000555416 LPXNO60711 386 aa15.29■□□□□ 0.04
SNX6-203ENST00000555416 LINC00271P0C7V0 271 aa15.29■□□□□ 0.04
SNX6-203ENST00000555416 DARSP14868 501 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms