RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 NLRC5Q86WI3 1866 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 EVPLQ92817 2033 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 IGKV6-21A0A0C4DH24 114 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 CHMP2AO43633 222 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 CCNT1O60563 726 aaKnown RBP13.31□□□□□ -0.28
VRK1-204ENST00000555351 STBD1O95210 358 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 BAG4O95429 457 aaKnown RBP13.31□□□□□ -0.28
VRK1-204ENST00000555351 LARGE1O95461 756 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 BMPR1AP36894 532 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 SARSP49591 514 aaKnown RBP13.31□□□□□ -0.28
VRK1-204ENST00000555351 TBC1D8BQ0IIM8 1120 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 TRIM29Q14134 588 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 UGCGQ16739 394 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 NAALADL2Q58DX5 795 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 PIK3AP1Q6ZUJ8 805 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 SLC24A5Q71RS6 500 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 OXER1Q8TDS5 423 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 ZSCAN31Q96LW9 406 aaPredicted RBP13.31□□□□□ -0.28
VRK1-204ENST00000555351 C11orf84Q9BUA3 381 aaPredicted RBP13.31□□□□□ -0.28
VRK1-204ENST00000555351 TMX1Q9H3N1 280 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 RGS18Q9NS28 235 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 VAV3Q9UKW4 847 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 MTUS1Q9ULD2 1270 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 NOC2LQ9Y3T9 749 aaKnown RBP13.31□□□□□ -0.28
VRK1-204ENST00000555351 A0A0C4DFX4 3053 aa13.31□□□□□ -0.28
VRK1-204ENST00000555351 PRRC2BQ5JSZ5 2229 aaKnown RBP13.3□□□□□ -0.28
VRK1-204ENST00000555351 P4HBP07237 508 aaKnown RBP13.3□□□□□ -0.28
VRK1-204ENST00000555351 LINC00271P0C7V0 271 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 EIF4BP23588 611 aaKnown RBP13.3□□□□□ -0.28
VRK1-204ENST00000555351 QARSP47897 775 aaKnown RBP13.3□□□□□ -0.28
VRK1-204ENST00000555351 DNM2P50570 870 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 NLRP11P59045 1033 aaKnown RBP13.3□□□□□ -0.28
VRK1-204ENST00000555351 FAM189BP81408 668 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 NFX1Q12986 1120 aaKnown RBP13.3□□□□□ -0.28
VRK1-204ENST00000555351 GPM6BQ13491 265 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 BTG3Q14201 252 aaPredicted RBP13.3□□□□□ -0.28
VRK1-204ENST00000555351 KIZQ2M2Z5 673 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 C8orf34Q49A92 452 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 TIGD5Q53EQ6 642 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 MICALL1Q8N3F8 863 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 TMEM40Q8WWA1 233 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 HAS1Q92839 578 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 P2RX5Q93086 422 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 HLA-CQ95604 372 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 CEP89Q96ST8 783 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 ADAMTS10Q9H324 1103 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 ELAC1Q9H777 363 aaKnown RBP13.3□□□□□ -0.28
VRK1-204ENST00000555351 CDHR5Q9HBB8 845 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 PRDM6Q9NQX0 595 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 SH2B1Q9NRF2 756 aaPredicted RBP13.3□□□□□ -0.28
VRK1-204ENST00000555351 GJB4Q9NTQ9 266 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 ST3GAL5Q9UNP4 418 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 AKT3Q9Y243 479 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 PRUNE2Q8WUY3 3088 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 CUL9Q8IWT3 2517 aa13.3□□□□□ -0.28
VRK1-204ENST00000555351 DENND3A2RUS2 1198 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 C9IYK1 514 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 MAFO75444 373 aaPredicted RBP13.29□□□□□ -0.28
VRK1-204ENST00000555351 VTNP04004 478 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 RBM25P49756 843 aaKnown RBP13.29□□□□□ -0.28
VRK1-204ENST00000555351 GPC3P51654 580 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 CLCN3P51790 818 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 HMGN5P82970 282 aaKnown RBP13.29□□□□□ -0.28
VRK1-204ENST00000555351 NR5A1Q13285 461 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 ORC2Q13416 577 aaPredicted RBP13.29□□□□□ -0.28
VRK1-204ENST00000555351 DSC3Q14574 896 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 EPHA7Q15375 998 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 SKIV2LQ15477 1246 aaKnown RBP13.29□□□□□ -0.28
VRK1-204ENST00000555351 KRT40Q6A162 431 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 FAM228AQ86W67 206 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 C4orf19Q8IY42 314 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 DIS3L2Q8IYB7 885 aaKnown RBP13.29□□□□□ -0.28
VRK1-204ENST00000555351 RSPH1Q8WYR4 309 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 GJA10Q969M2 543 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 OSMRQ99650 979 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 ADAM2Q99965 735 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 TMEM161AQ9NX61 479 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 SEPT9Q9UHD8 586 aaPredicted RBP13.29□□□□□ -0.28
VRK1-204ENST00000555351 LRFN2Q9ULH4 789 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 GINS2Q9Y248 185 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 PCDHB7Q9Y5E2 793 aa13.29□□□□□ -0.28
VRK1-204ENST00000555351 HOXA2O43364 376 aa13.28□□□□□ -0.28
VRK1-204ENST00000555351 NCK2O43639 380 aa13.28□□□□□ -0.28
VRK1-204ENST00000555351 GAS2O43903 313 aaKnown RBP13.28□□□□□ -0.28
VRK1-204ENST00000555351 MARCH6O60337 910 aa13.28□□□□□ -0.28
VRK1-204ENST00000555351 DARSP14868 501 aaKnown RBP13.28□□□□□ -0.28
VRK1-204ENST00000555351 CTNNB1P35222 781 aa13.28□□□□□ -0.28
VRK1-204ENST00000555351 SPIRE1Q08AE8 756 aa13.28□□□□□ -0.28
VRK1-204ENST00000555351 COL19A1Q14993 1142 aa13.28□□□□□ -0.28
VRK1-204ENST00000555351 SAFBQ15424 915 aaKnown RBP eCLIP13.28□□□□□ -0.28
VRK1-204ENST00000555351 TMEM266Q2M3C6 531 aa13.28□□□□□ -0.28
VRK1-204ENST00000555351 EARS2Q5JPH6 523 aaKnown RBP13.28□□□□□ -0.28
VRK1-204ENST00000555351 ANO5Q75V66 913 aa13.28□□□□□ -0.28
VRK1-204ENST00000555351 ZNF410Q86VK4 478 aa13.28□□□□□ -0.28
VRK1-204ENST00000555351 LRRC71Q8N4P6 559 aa13.28□□□□□ -0.28
VRK1-204ENST00000555351 KIF2CQ99661 725 aa13.28□□□□□ -0.28
VRK1-204ENST00000555351 INO80BQ9C086 356 aaPredicted RBP13.28□□□□□ -0.28
VRK1-204ENST00000555351 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.27□□□□□ -0.29
VRK1-204ENST00000555351 DDX11L8A8MPP1 907 aa13.27□□□□□ -0.29
VRK1-204ENST00000555351 BTBD18B2RXH4 712 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms