RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 FBXL21Q9UKT6 434 aa11.07□□□□□ -0.64
SCFD1-215ENST00000555259 DUSP12Q9UNI6 340 aa11.07□□□□□ -0.64
SCFD1-215ENST00000555259 GPR179Q6PRD1 2367 aa11.06□□□□□ -0.64
SCFD1-215ENST00000555259 GPR182O15218 404 aa11.06□□□□□ -0.64
SCFD1-215ENST00000555259 MTMR1Q13613 665 aa11.06□□□□□ -0.64
SCFD1-215ENST00000555259 IMMTQ16891 758 aaKnown RBP11.06□□□□□ -0.64
SCFD1-215ENST00000555259 ODR4Q5SWX8 454 aa11.06□□□□□ -0.64
SCFD1-215ENST00000555259 ANKRD45Q5TZF3 282 aa11.06□□□□□ -0.64
SCFD1-215ENST00000555259 MTHFD1LQ6UB35 978 aa11.06□□□□□ -0.64
SCFD1-215ENST00000555259 LRRC43Q8N309 656 aa11.06□□□□□ -0.64
SCFD1-215ENST00000555259 PIBF1Q8WXW3 757 aa11.06□□□□□ -0.64
SCFD1-215ENST00000555259 RUBCNQ92622 972 aa11.06□□□□□ -0.64
SCFD1-215ENST00000555259 ACSF2Q96CM8 615 aaPredicted RBP11.06□□□□□ -0.64
SCFD1-215ENST00000555259 JPH1Q9HDC5 661 aaPredicted RBP11.06□□□□□ -0.64
SCFD1-215ENST00000555259 DZANK1Q9NVP4 752 aa11.06□□□□□ -0.64
SCFD1-215ENST00000555259 ZBTB47Q9UFB7 747 aaPredicted RBP11.06□□□□□ -0.64
SCFD1-215ENST00000555259 SDSP20132 328 aa11.05□□□□□ -0.64
SCFD1-215ENST00000555259 CYB5R4Q7L1T6 521 aa11.05□□□□□ -0.64
SCFD1-215ENST00000555259 PLPPR4Q7Z2D5 763 aa11.05□□□□□ -0.64
SCFD1-215ENST00000555259 KIAA0319LQ8IZA0 1049 aa11.05□□□□□ -0.64
SCFD1-215ENST00000555259 SLC39A11Q8N1S5 342 aa11.05□□□□□ -0.64
SCFD1-215ENST00000555259 FEZF2Q8TBJ5 459 aa11.05□□□□□ -0.64
SCFD1-215ENST00000555259 RILPL2Q969X0 211 aa11.05□□□□□ -0.64
SCFD1-215ENST00000555259 KCNK12Q9HB15 430 aa11.05□□□□□ -0.64
SCFD1-215ENST00000555259 RNF19AQ9NV58 838 aa11.05□□□□□ -0.64
SCFD1-215ENST00000555259 UBIAD1Q9Y5Z9 338 aa11.05□□□□□ -0.64
SCFD1-215ENST00000555259 DENND4AQ7Z401 1863 aa11.04□□□□□ -0.64
SCFD1-215ENST00000555259 HOXA2O43364 376 aa11.04□□□□□ -0.64
SCFD1-215ENST00000555259 EPCAMP16422 314 aa11.04□□□□□ -0.64
SCFD1-215ENST00000555259 KLRC1P26715 233 aa11.04□□□□□ -0.64
SCFD1-215ENST00000555259 CA8P35219 290 aa11.04□□□□□ -0.64
SCFD1-215ENST00000555259 STAT5BP51692 787 aa11.04□□□□□ -0.64
SCFD1-215ENST00000555259 TROAPQ12815 778 aa11.04□□□□□ -0.64
SCFD1-215ENST00000555259 DSC3Q14574 896 aa11.04□□□□□ -0.64
SCFD1-215ENST00000555259 TMC5Q6UXY8 1006 aa11.04□□□□□ -0.64
SCFD1-215ENST00000555259 FAM228AQ86W67 206 aa11.04□□□□□ -0.64
SCFD1-215ENST00000555259 ABI1Q8IZP0 508 aa11.04□□□□□ -0.64
SCFD1-215ENST00000555259 DCLK2Q8N568 766 aa11.04□□□□□ -0.64
SCFD1-215ENST00000555259 RIN2Q8WYP3 895 aaPredicted RBP11.04□□□□□ -0.64
SCFD1-215ENST00000555259 JADE2Q9NQC1 790 aa11.04□□□□□ -0.64
SCFD1-215ENST00000555259 SLC9A2Q9UBY0 812 aa11.04□□□□□ -0.64
SCFD1-215ENST00000555259 MAP1BP46821 2468 aaKnown RBP11.03□□□□□ -0.64
SCFD1-215ENST00000555259 STK25O00506 426 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 MAFGO15525 162 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 NARSO43776 548 aaKnown RBP11.03□□□□□ -0.64
SCFD1-215ENST00000555259 CXCL14O95715 111 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 ACTR2P61160 394 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 BMS1Q14692 1282 aaKnown RBP11.03□□□□□ -0.64
SCFD1-215ENST00000555259 RSPO4Q2I0M5 234 aaPredicted RBP11.03□□□□□ -0.64
SCFD1-215ENST00000555259 KIZQ2M2Z5 673 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 ZC3H14Q6PJT7 736 aaKnown RBP11.03□□□□□ -0.64
SCFD1-215ENST00000555259 CWC27Q6UX04 472 aaKnown RBP11.03□□□□□ -0.64
SCFD1-215ENST00000555259 CCDC149Q6ZUS6 474 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 OTOP3Q7RTS5 596 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 OSMRQ99650 979 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 DSCC1Q9BVC3 393 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 SENP2Q9HC62 589 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 CHD6Q8TD26 2715 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.03□□□□□ -0.64
SCFD1-215ENST00000555259 KRBA1A5PL33 1030 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 CRYBB1P53674 252 aaPredicted RBP11.03□□□□□ -0.64
SCFD1-215ENST00000555259 GPR149Q86SP6 731 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 CABP7Q86V35 215 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 TMEM87AQ8NBN3 555 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 SLC22A17Q8WUG5 538 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 AUTS2Q8WXX7 1259 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 PPP1R16BQ96T49 567 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 WNT16Q9UBV4 365 aa11.03□□□□□ -0.64
SCFD1-215ENST00000555259 CHD8Q9HCK8 2581 aa11.02□□□□□ -0.64
SCFD1-215ENST00000555259 NT5C1B-RDH14C9J2C7 533 aa11.02□□□□□ -0.65
SCFD1-215ENST00000555259 CFHP08603 1231 aa11.02□□□□□ -0.65
SCFD1-215ENST00000555259 SP9P0CG40 484 aa11.02□□□□□ -0.65
SCFD1-215ENST00000555259 SLC26A2P50443 739 aa11.02□□□□□ -0.65
SCFD1-215ENST00000555259 METAP2P50579 478 aaKnown RBP eCLIP11.02□□□□□ -0.65
SCFD1-215ENST00000555259 TBC1D8BQ0IIM8 1120 aa11.02□□□□□ -0.65
SCFD1-215ENST00000555259 CLLU1OSQ5K130 101 aa11.02□□□□□ -0.65
SCFD1-215ENST00000555259 VPS52Q8N1B4 723 aa11.02□□□□□ -0.65
SCFD1-215ENST00000555259 TMEM169Q96HH4 297 aa11.02□□□□□ -0.65
SCFD1-215ENST00000555259 ZBP1Q9H171 429 aa11.02□□□□□ -0.65
SCFD1-215ENST00000555259 SFXN1Q9H9B4 322 aa11.02□□□□□ -0.65
SCFD1-215ENST00000555259 KCNH7Q9NS40 1196 aa11.02□□□□□ -0.65
SCFD1-215ENST00000555259 IGSF9Q9P2J2 1179 aa11.02□□□□□ -0.65
SCFD1-215ENST00000555259 IRAK3Q9Y616 596 aa11.02□□□□□ -0.65
SCFD1-215ENST00000555259 IFIT3O14879 490 aaKnown RBP11.01□□□□□ -0.65
SCFD1-215ENST00000555259 HBP1O60381 514 aa11.01□□□□□ -0.65
SCFD1-215ENST00000555259 GPR32O75388 356 aa11.01□□□□□ -0.65
SCFD1-215ENST00000555259 RFX1P22670 979 aa11.01□□□□□ -0.65
SCFD1-215ENST00000555259 ALDH7A1P49419 539 aaKnown RBP11.01□□□□□ -0.65
SCFD1-215ENST00000555259 BCAR1P56945 870 aa11.01□□□□□ -0.65
SCFD1-215ENST00000555259 ECHDC2Q86YB7 292 aa11.01□□□□□ -0.65
SCFD1-215ENST00000555259 FANCMQ8IYD8 2048 aa11.01□□□□□ -0.65
SCFD1-215ENST00000555259 SUMF1Q8NBK3 374 aa11.01□□□□□ -0.65
SCFD1-215ENST00000555259 RRP36Q96EU6 259 aaKnown RBP11.01□□□□□ -0.65
SCFD1-215ENST00000555259 SDF4Q9BRK5 362 aa11.01□□□□□ -0.65
SCFD1-215ENST00000555259 SPZ1Q9BXG8 430 aa11.01□□□□□ -0.65
SCFD1-215ENST00000555259 PSTPIP2Q9H939 334 aa11.01□□□□□ -0.65
SCFD1-215ENST00000555259 TBC1D17Q9HA65 648 aa11.01□□□□□ -0.65
SCFD1-215ENST00000555259 NFASCO94856 1347 aa11.01□□□□□ -0.65
SCFD1-215ENST00000555259 COL1A2P08123 1366 aa11□□□□□ -0.65
SCFD1-215ENST00000555259 IGKV6D-21A0A0A0MT36 114 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms