RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 GDF3Q9NR23 364 aa17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 FBXO28Q9NVF7 368 aa17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 ZMYM2Q9UBW7 1377 aa17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 GCOM1H8Y6P7 765 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 POLR2MP0CAP2 368 aa17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 ARP10275 920 aa17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 TNNC1P63316 161 aa17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 VPS36Q86VN1 386 aa17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 GLYCTKQ8IVS8 523 aa17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 CDAN1Q8IWY9 1227 aa17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 FAM178BQ8IXR5 827 aa17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 HSD17B14Q9BPX1 270 aa17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 DDX47Q9H0S4 455 aaKnown RBP17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 VEZTQ9HBM0 779 aa17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 GOLGA8KD6RF30 607 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 DDX3XO00571 662 aaKnown RBP eCLIP17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 PPIP5K2O43314 1243 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 SLC26A4O43511 780 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 EVI5O60447 810 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 H2AFZP0C0S5 128 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 PPFIA1Q13136 1202 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 ODR4Q5SWX8 454 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 CC2D2BQ6DHV5 1058 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 H2AFVQ71UI9 128 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 CAVIN3Q969G5 261 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 ARHGEF10LQ9HCE6 1279 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 BZW2Q9Y6E2 419 aaKnown RBP17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 PSMC2P35998 433 aaKnown RBP17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 IRAK1P51617 712 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 NAA35Q5VZE5 725 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 MCTP2Q6DN12 878 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 C1orf186Q6ZWK4 172 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 MAATS1Q7Z4T9 603 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 ADAT2Q7Z6V5 191 aaKnown RBP17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 SYCP3Q8IZU3 236 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 TPCN2Q8NHX9 752 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 ZNF577Q9BSK1 485 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 OSGEPQ9NPF4 335 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 ZBTB21Q9ULJ3 1066 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 SRCAPQ6ZRS2 3230 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 PPP1R12BO60237 982 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 LRRN2O75325 713 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 RPS6KA5O75582 802 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 CCT5P48643 541 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 MMP14P50281 582 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 CBWD6Q4V339 395 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 CBWD3Q5JTY5 395 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 CBWD5Q5RIA9 395 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 METTL13Q8N6R0 699 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 RUBCNQ92622 972 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 UNC45AQ9H3U1 944 aa17.1■□□□□ 0.33
ARHGEF40-203ENST00000554514 SLC16A3O15427 465 aaKnown RBP17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 RAD17O75943 681 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 PDCLQ13371 301 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 NNTQ13423 1086 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 PRPF4BQ13523 1007 aaKnown RBP17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 BMT2Q1RMZ1 405 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 PCIF1Q9H4Z3 704 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 DNAJC12Q9UKB3 198 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 NOC2LQ9Y3T9 749 aaKnown RBP17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 SHTN1A0MZ66 631 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 YDJCA8MPS7 323 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 PPFIA4O75335 1185 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 PSMD10O75832 226 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 ITGA4P13612 1032 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 GAP43P17677 238 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 STAT1P42224 750 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 PRELPP51888 382 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 GALCP54803 685 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 JAM2P57087 298 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 HDLBPQ00341 1268 aaKnown RBP17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 DRAP1Q14919 205 aaPredicted RBP17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 ALS2CLQ60I27 953 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 LRRC57Q8N9N7 239 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 LNX1Q8TBB1 728 aaPredicted RBP17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 AKT1S1Q96B36 256 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 SH3GL2Q99962 352 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 TMOD2Q9NZR1 351 aa17.09■□□□□ 0.33
ARHGEF40-203ENST00000554514 TISP43B9A030 160 aa17.08■□□□□ 0.33
ARHGEF40-203ENST00000554514 ZEB2O60315 1214 aa17.08■□□□□ 0.33
ARHGEF40-203ENST00000554514 CYP3A4P08684 503 aa17.08■□□□□ 0.33
ARHGEF40-203ENST00000554514 BRD2P25440 801 aaKnown RBP17.08■□□□□ 0.33
ARHGEF40-203ENST00000554514 ERVK-9P63128 1117 aa17.08■□□□□ 0.33
ARHGEF40-203ENST00000554514 IFI16Q16666 785 aaKnown RBP17.08■□□□□ 0.33
ARHGEF40-203ENST00000554514 BTNL9Q6UXG8 535 aa17.08■□□□□ 0.33
ARHGEF40-203ENST00000554514 HS2ST1Q7LGA3 356 aa17.08■□□□□ 0.33
ARHGEF40-203ENST00000554514 MRIQ9BWK5 157 aa17.08■□□□□ 0.33
ARHGEF40-203ENST00000554514 GLIS2Q9BZE0 524 aaPredicted RBP17.08■□□□□ 0.33
ARHGEF40-203ENST00000554514 OLFML3Q9NRN5 406 aa17.08■□□□□ 0.33
ARHGEF40-203ENST00000554514 FRMD4BQ9Y2L6 1034 aa17.08■□□□□ 0.33
ARHGEF40-203ENST00000554514 ZNF233A6NK53 670 aa17.08■□□□□ 0.32
ARHGEF40-203ENST00000554514 KRIT1O00522 736 aa17.08■□□□□ 0.32
ARHGEF40-203ENST00000554514 C21orf2O43822 256 aa17.08■□□□□ 0.32
ARHGEF40-203ENST00000554514 TNFRSF8P28908 595 aa17.08■□□□□ 0.32
ARHGEF40-203ENST00000554514 FMO5P49326 533 aa17.08■□□□□ 0.32
ARHGEF40-203ENST00000554514 C10orf76Q5T2E6 689 aa17.08■□□□□ 0.32
ARHGEF40-203ENST00000554514 BCAS4Q8TDM0 211 aa17.08■□□□□ 0.32
ARHGEF40-203ENST00000554514 HOOK2Q96ED9 719 aa17.08■□□□□ 0.32
ARHGEF40-203ENST00000554514 LXNQ9BS40 222 aa17.08■□□□□ 0.32
ARHGEF40-203ENST00000554514 ZBTB12Q9Y330 459 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms