RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 PASKQ96RG2 1323 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 CCDC88AQ3V6T2 1871 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 BTBD18B2RXH4 712 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 RGS16O15492 202 aaPredicted RBP10.31□□□□□ -0.76
SIX4-202ENST00000554079 CDK4P11802 303 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 PRCPP42785 496 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 RNASE9P60153 205 aaKnown RBP10.31□□□□□ -0.76
SIX4-202ENST00000554079 ITGA7Q13683 1181 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 TRIM29Q14134 588 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 RCN1Q15293 331 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 ASTE1Q2TB18 679 aaPredicted RBP10.31□□□□□ -0.76
SIX4-202ENST00000554079 KHDC1Q4VXA5 237 aaKnown RBP10.31□□□□□ -0.76
SIX4-202ENST00000554079 RILPL1Q5EBL4 403 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 DAAM2Q86T65 1068 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 TRIM50Q86XT4 487 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 CCDC65Q8IXS2 484 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 NME8Q8N427 588 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 DQX1Q8TE96 717 aaKnown RBP10.31□□□□□ -0.76
SIX4-202ENST00000554079 MAML3Q96JK9 1138 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 ZNF184Q99676 751 aaPredicted RBP10.31□□□□□ -0.76
SIX4-202ENST00000554079 UBAC1Q9BSL1 405 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 BABAM1Q9NWV8 329 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 UTYO14607 1347 aa10.31□□□□□ -0.76
SIX4-202ENST00000554079 PLEKHG1Q9ULL1 1385 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 KIF13BQ9NQT8 1826 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 TMEM110-MUSTN1A8MSY1 372 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 UBE2Q2LH0YL09 131 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 TRAFD1O14545 582 aaPredicted RBP10.3□□□□□ -0.76
SIX4-202ENST00000554079 MMP1P03956 469 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 T-ENOLP0DO92 83 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 PIM1P11309 404 aaPredicted RBP10.3□□□□□ -0.76
SIX4-202ENST00000554079 TARSP26639 723 aaKnown RBP10.3□□□□□ -0.76
SIX4-202ENST00000554079 IGHMBP2P38935 993 aaKnown RBP10.3□□□□□ -0.76
SIX4-202ENST00000554079 GRIA2P42262 883 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 HALP42357 657 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 SLC1A4P43007 532 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 SERPINB8P50452 374 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 DNA2P51530 1060 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 NEK3P51956 506 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 PMS1P54277 932 aaKnown RBP10.3□□□□□ -0.76
SIX4-202ENST00000554079 SLC34A1Q06495 639 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 CCDC6Q16204 474 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 MEX3CQ5U5Q3 659 aaKnown RBP10.3□□□□□ -0.76
SIX4-202ENST00000554079 FAM47EQ6ZV65 393 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 TMC4Q7Z404 712 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 NEK9Q8TD19 979 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 GAB3Q8WWW8 586 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 STAMQ92783 540 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 SYMPKQ92797 1274 aaKnown RBP10.3□□□□□ -0.76
SIX4-202ENST00000554079 ERGIC2Q96RQ1 377 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 BLZF1Q9H2G9 400 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 C9orf78Q9NZ63 289 aaPredicted RBP10.3□□□□□ -0.76
SIX4-202ENST00000554079 CHPF2Q9P2E5 772 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 HAO1Q9UJM8 370 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 GDAQ9Y2T3 454 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 UMODL1Q5DID0 1318 aa10.3□□□□□ -0.76
SIX4-202ENST00000554079 CCDC169A6NNP5 214 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 FOXP2O15409 715 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 SERPINB7O75635 380 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 KRT36O76013 467 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 ZBTB48P10074 688 aaPredicted RBP10.29□□□□□ -0.76
SIX4-202ENST00000554079 METAP2P50579 478 aaKnown RBP eCLIP10.29□□□□□ -0.76
SIX4-202ENST00000554079 CLCN2P51788 898 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 PDE1BQ01064 536 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 ITGA9Q13797 1035 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 TNNI3KQ59H18 835 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 RFWD3Q6PCD5 774 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 C4orf50Q6ZRC1 276 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 C2CD5Q86YS7 1000 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 NELFCDQ8IXH7 590 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 CLIP3Q96DZ5 547 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 HNRNPABQ99729 332 aaKnown RBP10.29□□□□□ -0.76
SIX4-202ENST00000554079 TMEM109Q9BVC6 243 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 KIAA1683Q9H0B3 1180 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 METTL14Q9HCE5 456 aaKnown RBP10.29□□□□□ -0.76
SIX4-202ENST00000554079 KLHL14Q9P2G3 628 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 PACSIN2Q9UNF0 486 aaPredicted RBP10.29□□□□□ -0.76
SIX4-202ENST00000554079 ANGEL1Q9UNK9 670 aaKnown RBP10.29□□□□□ -0.76
SIX4-202ENST00000554079 FPGT-TNNI3KV9GXZ4 949 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 MYPNQ86TC9 1320 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 ATAD5Q96QE3 1844 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 ARHGAP23Q9P227 1491 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 MYH11P35749 1972 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 SMIM31A0A1B0GVY4 71 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 RBAK-RBAKDNI3L0D1 243 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 HGSO14964 777 aaPredicted RBP10.29□□□□□ -0.76
SIX4-202ENST00000554079 GTPBP6O43824 516 aaPredicted RBP10.29□□□□□ -0.76
SIX4-202ENST00000554079 AKR1B10O60218 316 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 GSTT2P0CG29 244 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 GSTT2BP0CG30 244 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 GNAT2P19087 354 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 HOXD11P31277 338 aaPredicted RBP10.29□□□□□ -0.76
SIX4-202ENST00000554079 ADRM1Q16186 407 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 GRAMD4Q6IC98 578 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 PDXDC2PQ6P474 469 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 INTS8Q75QN2 995 aaKnown RBP10.29□□□□□ -0.76
SIX4-202ENST00000554079 DIS3L2Q8IYB7 885 aaKnown RBP10.29□□□□□ -0.76
SIX4-202ENST00000554079 ST13P4Q8IZP2 240 aaPredicted RBP10.29□□□□□ -0.76
SIX4-202ENST00000554079 ADSSL1Q8N142 457 aa10.29□□□□□ -0.76
SIX4-202ENST00000554079 FNDC8Q8TC99 324 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms