RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 STBD1O95210 358 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 MYL3P08590 195 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 C6orf222P0C671 652 aaPredicted RBP11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 HOXD8P13378 290 aaPredicted RBP11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 ATP4AP20648 1035 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 ERCC5P28715 1186 aaPredicted RBP11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 DNM2P50570 870 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 SMTNP53814 917 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 GJA9P57773 515 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 COASYQ13057 564 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 PLCB4Q15147 1175 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 FSCN1Q16658 493 aaKnown RBP11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 TPD52L1Q16890 204 aaPredicted RBP11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 GNASQ5JWF2 1037 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 FAM26FQ5R3K3 315 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 ODR4Q5SWX8 454 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 FAM102BQ5T8I3 360 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 MAEAQ7L5Y9 396 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 TRIM50Q86XT4 487 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 RETREG2Q8NC44 543 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 RNF214Q8ND24 703 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 TRPV1Q8NER1 839 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 TCP11Q8WWU5 503 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 ANP32BQ92688 251 aaKnown RBP11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 IFT74Q96LB3 600 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 BPIFA3Q9BQP9 254 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 MRPL44Q9H9J2 332 aaKnown RBP11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 SLC39A2Q9NP94 309 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 XPNPEP3Q9NQH7 507 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 FRMD3A2A2Y4 597 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 TMEM150BA6NC51 233 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 RRN3P2A6NIE6 340 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 H0YCG3 227 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 MAGEB2O15479 319 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 INHAP05111 366 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 ZNF286BP0CG31 522 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 CCND3P30281 292 aaPredicted RBP11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 ABCD1P33897 745 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 MRE11P49959 708 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 CHMP4BP1P59074 171 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 CAP1Q01518 475 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 TRIM32Q13049 653 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 PPP2R5AQ15172 486 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 UVSSAQ2YD98 709 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 MAP3K21Q5TCX8 1036 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 KLHL10Q6JEL2 608 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 RNF180Q86T96 592 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 GAS2L3Q86XJ1 694 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 FAM178BQ8IXR5 827 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 MYOCDQ8IZQ8 938 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 PCSK9Q8NBP7 692 aaKnown RBP11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 DHTKD1Q96HY7 919 aaPredicted RBP11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 SH2D3AQ9BRG2 576 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 C16orf70Q9BSU1 422 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 OLFML3Q9NRN5 406 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 DDX20Q9UHI6 824 aaKnown RBP11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 PTPN22Q9Y2R2 807 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 PCDHB13Q9Y5F0 798 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 PTCH2Q9Y6C5 1203 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 LRRC37A2A6NM11 1700 aa11.57□□□□□ -0.56
TMEM55B-205ENST00000554028 KIAA1217Q5T5P2 1943 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 COL1A2P08123 1366 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 BICDL2A1A5D9 508 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 SFI1A8K8P3 1242 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 ADCY6O43306 1168 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 MAFO75444 373 aaPredicted RBP11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 MAPTP10636 758 aaKnown RBP11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 GNAT1P11488 350 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 PLS3P13797 630 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 BMP6P22004 513 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 SCP2P22307 547 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 PTGS1P23219 599 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 TMOD1P28289 359 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 PRCPP42785 496 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 ZNF131P52739 623 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 RTP1P59025 263 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 BEX3Q00994 111 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 MYL5Q02045 173 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 STK4Q13043 487 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 PAK1Q13153 545 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 DMP1Q13316 513 aaPredicted RBP11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 ALCAMQ13740 583 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 EMC2Q15006 297 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 TARBP2Q15633 366 aaKnown RBP11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 SLC9C1Q4G0N8 1177 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 COBLL1Q53SF7 1204 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 IER5Q5VY09 327 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 C11orf57Q6ZUT1 292 aaPredicted RBP11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 SFR1Q86XK3 245 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 ADSSL1Q8N142 457 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 GUF1Q8N442 669 aaKnown RBP11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 TSG101Q99816 390 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 MTG1Q9BT17 334 aaPredicted RBP11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 UPF3AQ9H1J1 476 aaKnown RBP11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 RBSNQ9H1K0 784 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 RNPEPQ9H4A4 650 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 DHX33Q9H6R0 707 aaKnown RBP11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 CBX8Q9HC52 389 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 TBC1D7Q9P0N9 293 aa11.56□□□□□ -0.56
TMEM55B-205ENST00000554028 GDAQ9Y2T3 454 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms