RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 ANO3Q9BYT9 981 aa6.98□□□□□ -1.29
FOXN3-206ENST00000554005 KCND1Q9NSA2 647 aa6.98□□□□□ -1.29
FOXN3-206ENST00000554005 PRSS38A1L453 326 aa6.97□□□□□ -1.29
FOXN3-206ENST00000554005 FZD9O00144 591 aa6.97□□□□□ -1.29
FOXN3-206ENST00000554005 H2AFYO75367 372 aaKnown RBP6.97□□□□□ -1.29
FOXN3-206ENST00000554005 MYBL2P10244 700 aa6.97□□□□□ -1.29
FOXN3-206ENST00000554005 PI3P19957 117 aa6.97□□□□□ -1.29
FOXN3-206ENST00000554005 ENPP1P22413 925 aa6.97□□□□□ -1.29
FOXN3-206ENST00000554005 APEX1P27695 318 aaKnown RBP6.97□□□□□ -1.29
FOXN3-206ENST00000554005 FSCN1Q16658 493 aaKnown RBP6.97□□□□□ -1.29
FOXN3-206ENST00000554005 TGFBRAP1Q8WUH2 860 aa6.97□□□□□ -1.29
FOXN3-206ENST00000554005 JDP2Q8WYK2 163 aa6.97□□□□□ -1.29
FOXN3-206ENST00000554005 ORAI2Q96SN7 254 aa6.97□□□□□ -1.29
FOXN3-206ENST00000554005 CCM2LQ9NUG4 571 aaPredicted RBP6.97□□□□□ -1.29
FOXN3-206ENST00000554005 CROTQ9UKG9 612 aa6.97□□□□□ -1.29
FOXN3-206ENST00000554005 G3BP2Q9UN86 482 aaKnown RBP6.97□□□□□ -1.29
FOXN3-206ENST00000554005 RNF114Q9Y508 228 aa6.97□□□□□ -1.29
FOXN3-206ENST00000554005 SHTN1A0MZ66 631 aa6.96□□□□□ -1.3
FOXN3-206ENST00000554005 COL6A1P12109 1028 aa6.96□□□□□ -1.3
FOXN3-206ENST00000554005 MCL1Q07820 350 aa6.96□□□□□ -1.3
FOXN3-206ENST00000554005 NOLC1Q14978 699 aaKnown RBP eCLIP6.96□□□□□ -1.3
FOXN3-206ENST00000554005 CT83Q5H943 113 aa6.96□□□□□ -1.3
FOXN3-206ENST00000554005 PITRM1Q5JRX3 1037 aa6.96□□□□□ -1.3
FOXN3-206ENST00000554005 PRR31Q5SQ13 230 aa6.96□□□□□ -1.3
FOXN3-206ENST00000554005 OGFOD2Q6N063 350 aa6.96□□□□□ -1.3
FOXN3-206ENST00000554005 CCDC62Q6P9F0 684 aa6.96□□□□□ -1.3
FOXN3-206ENST00000554005 CNKSR3Q6P9H4 555 aa6.96□□□□□ -1.3
FOXN3-206ENST00000554005 RAVER1Q8IY67 606 aaKnown RBP6.96□□□□□ -1.3
FOXN3-206ENST00000554005 C1orf162Q8NEQ5 155 aaPredicted RBP6.96□□□□□ -1.3
FOXN3-206ENST00000554005 CHMP4CQ96CF2 233 aa6.96□□□□□ -1.3
FOXN3-206ENST00000554005 FUBP3Q96I24 572 aaKnown RBP eCLIP6.96□□□□□ -1.3
FOXN3-206ENST00000554005 PPP1R16BQ96T49 567 aa6.96□□□□□ -1.3
FOXN3-206ENST00000554005 CD320Q9NPF0 282 aa6.96□□□□□ -1.3
FOXN3-206ENST00000554005 SPATA6Q9NWH7 488 aaPredicted RBP6.96□□□□□ -1.3
FOXN3-206ENST00000554005 KCNG1Q9UIX4 513 aa6.96□□□□□ -1.3
FOXN3-206ENST00000554005 SPEF1Q9Y4P9 236 aa6.96□□□□□ -1.3
FOXN3-206ENST00000554005 BAZ1BQ9UIG0 1483 aaKnown RBP6.96□□□□□ -1.3
FOXN3-206ENST00000554005 WIZO95785 1651 aa6.96□□□□□ -1.3
FOXN3-206ENST00000554005 ST20-MTHFSA0A0A6YYL1 179 aa6.95□□□□□ -1.3
FOXN3-206ENST00000554005 TCAF2A6NFQ2 919 aa6.95□□□□□ -1.3
FOXN3-206ENST00000554005 TRIM75PA6NK02 468 aa6.95□□□□□ -1.3
FOXN3-206ENST00000554005 MAFO75444 373 aaPredicted RBP6.95□□□□□ -1.3
FOXN3-206ENST00000554005 KNG1P01042 644 aa6.95□□□□□ -1.3
FOXN3-206ENST00000554005 C1QTNF9P0C862 333 aa6.95□□□□□ -1.3
FOXN3-206ENST00000554005 EPHB1P54762 984 aa6.95□□□□□ -1.3
FOXN3-206ENST00000554005 MLLT6P55198 1093 aaPredicted RBP6.95□□□□□ -1.3
FOXN3-206ENST00000554005 BCAR1P56945 870 aa6.95□□□□□ -1.3
FOXN3-206ENST00000554005 CD83Q01151 205 aa6.95□□□□□ -1.3
FOXN3-206ENST00000554005 DLX2Q07687 328 aaPredicted RBP6.95□□□□□ -1.3
FOXN3-206ENST00000554005 PTPN21Q16825 1174 aa6.95□□□□□ -1.3
FOXN3-206ENST00000554005 ZNF648Q5T619 568 aaPredicted RBP6.95□□□□□ -1.3
FOXN3-206ENST00000554005 DPP8Q6V1X1 898 aaPredicted RBP6.95□□□□□ -1.3
FOXN3-206ENST00000554005 CXXC5Q7LFL8 322 aaKnown RBP6.95□□□□□ -1.3
FOXN3-206ENST00000554005 WDR48Q8TAF3 677 aa6.95□□□□□ -1.3
FOXN3-206ENST00000554005 ZCCHC14Q8WYQ9 949 aaKnown RBP6.95□□□□□ -1.3
FOXN3-206ENST00000554005 EAF2Q96CJ1 260 aaPredicted RBP6.95□□□□□ -1.3
FOXN3-206ENST00000554005 PWWP2AQ96N64 755 aa6.95□□□□□ -1.3
FOXN3-206ENST00000554005 WNT8AQ9H1J5 351 aa6.95□□□□□ -1.3
FOXN3-206ENST00000554005 MTG2Q9H4K7 406 aa6.95□□□□□ -1.3
FOXN3-206ENST00000554005 PRDM12Q9H4Q4 367 aa6.95□□□□□ -1.3
FOXN3-206ENST00000554005 TMPRSS11EQ9UL52 423 aa6.95□□□□□ -1.3
FOXN3-206ENST00000554005 DENND2AQ9ULE3 1009 aa6.95□□□□□ -1.3
FOXN3-206ENST00000554005 CNOT6Q9ULM6 557 aaKnown RBP6.95□□□□□ -1.3
FOXN3-206ENST00000554005 SMG5Q9UPR3 1016 aaKnown RBP6.95□□□□□ -1.3
FOXN3-206ENST00000554005 KCTD3Q9Y597 815 aa6.95□□□□□ -1.3
FOXN3-206ENST00000554005 CYP7B1O75881 506 aa6.94□□□□□ -1.3
FOXN3-206ENST00000554005 TSPAN15O95858 294 aa6.94□□□□□ -1.3
FOXN3-206ENST00000554005 CHGBP05060 677 aa6.94□□□□□ -1.3
FOXN3-206ENST00000554005 PFKMP08237 780 aa6.94□□□□□ -1.3
FOXN3-206ENST00000554005 RBP3P10745 1247 aa6.94□□□□□ -1.3
FOXN3-206ENST00000554005 UGT8Q16880 541 aa6.94□□□□□ -1.3
FOXN3-206ENST00000554005 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.94□□□□□ -1.3
FOXN3-206ENST00000554005 VWA3BQ502W6 1294 aa6.94□□□□□ -1.3
FOXN3-206ENST00000554005 PGM2L1Q6PCE3 622 aa6.94□□□□□ -1.3
FOXN3-206ENST00000554005 SAPCD2Q86UD0 394 aa6.94□□□□□ -1.3
FOXN3-206ENST00000554005 ZBTB46Q86UZ6 589 aa6.94□□□□□ -1.3
FOXN3-206ENST00000554005 LYSMD2Q8IV50 215 aa6.94□□□□□ -1.3
FOXN3-206ENST00000554005 POU5F2Q8N7G0 328 aa6.94□□□□□ -1.3
FOXN3-206ENST00000554005 RPGRQ92834 1020 aaKnown RBP6.94□□□□□ -1.3
FOXN3-206ENST00000554005 FAXDC2Q96IV6 333 aa6.94□□□□□ -1.3
FOXN3-206ENST00000554005 SLC38A3Q99624 504 aa6.94□□□□□ -1.3
FOXN3-206ENST00000554005 PITHD1Q9GZP4 211 aaPredicted RBP6.94□□□□□ -1.3
FOXN3-206ENST00000554005 NUMBLQ9Y6R0 609 aa6.94□□□□□ -1.3
FOXN3-206ENST00000554005 TOP2AP11388 1531 aaKnown RBP6.93□□□□□ -1.3
FOXN3-206ENST00000554005 PCDH8O95206 1070 aa6.93□□□□□ -1.3
FOXN3-206ENST00000554005 CFBP00751 764 aa6.93□□□□□ -1.3
FOXN3-206ENST00000554005 LPLP06858 475 aa6.93□□□□□ -1.3
FOXN3-206ENST00000554005 ZNF28P17035 718 aa6.93□□□□□ -1.3
FOXN3-206ENST00000554005 NFATC3Q12968 1075 aa6.93□□□□□ -1.3
FOXN3-206ENST00000554005 PCBP2Q15366 365 aaKnown RBP eCLIP6.93□□□□□ -1.31e-6■■■■■ 29
FOXN3-206ENST00000554005 WDR72Q3MJ13 1102 aa6.93□□□□□ -1.3
FOXN3-206ENST00000554005 AMOTL1Q8IY63 956 aa6.93□□□□□ -1.3
FOXN3-206ENST00000554005 BHLHE22Q8NFJ8 381 aaPredicted RBP6.93□□□□□ -1.3
FOXN3-206ENST00000554005 OR5AN1Q8NGI8 311 aa6.93□□□□□ -1.3
FOXN3-206ENST00000554005 HOOK2Q96ED9 719 aa6.93□□□□□ -1.3
FOXN3-206ENST00000554005 SLC13A1Q9BZW2 595 aa6.93□□□□□ -1.3
FOXN3-206ENST00000554005 QRSL1Q9H0R6 528 aaKnown RBP6.93□□□□□ -1.3
FOXN3-206ENST00000554005 KCTD10Q9H3F6 313 aa6.93□□□□□ -1.3
FOXN3-206ENST00000554005 DNAJC28Q9NX36 388 aa6.93□□□□□ -1.3
FOXN3-206ENST00000554005 MKS1Q9NXB0 559 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms