RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 C1orf162Q8NEQ5 155 aaPredicted RBP4.81□□□□□ -1.64
EFCAB11-204ENST00000553871 HOOK2Q96ED9 719 aa4.81□□□□□ -1.64
EFCAB11-204ENST00000553871 RAX2Q96IS3 184 aa4.81□□□□□ -1.64
EFCAB11-204ENST00000553871 CCDC136Q96JN2 1154 aa4.81□□□□□ -1.64
EFCAB11-204ENST00000553871 SLC38A3Q99624 504 aa4.81□□□□□ -1.64
EFCAB11-204ENST00000553871 SYT3Q9BQG1 590 aa4.81□□□□□ -1.64
EFCAB11-204ENST00000553871 C11orf84Q9BUA3 381 aaPredicted RBP4.81□□□□□ -1.64
EFCAB11-204ENST00000553871 AMNQ9BXJ7 453 aa4.81□□□□□ -1.64
EFCAB11-204ENST00000553871 MTG2Q9H4K7 406 aa4.81□□□□□ -1.64
EFCAB11-204ENST00000553871 LUC7LQ9NQ29 371 aaKnown RBP4.81□□□□□ -1.64
EFCAB11-204ENST00000553871 EDARQ9UNE0 448 aa4.81□□□□□ -1.64
EFCAB11-204ENST00000553871 INVSQ9Y283 1065 aa4.81□□□□□ -1.64
EFCAB11-204ENST00000553871 LUC7L2Q9Y383 392 aaKnown RBP4.81□□□□□ -1.64
EFCAB11-204ENST00000553871 TCAF2A6NFQ2 919 aa4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 RFXAPO00287 272 aa4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 ETV2O00321 342 aaPredicted RBP4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 ELL2O00472 640 aaPredicted RBP4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 MTHFD2P13995 350 aa4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 RAB27AP51159 221 aa4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 IL13RA1P78552 427 aa4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 SRSF2Q01130 221 aaKnown RBP4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 PPARAQ07869 468 aa4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 ADAM9Q13443 819 aa4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 NOLC1Q14978 699 aaKnown RBP eCLIP4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 HSP90AB2PQ58FF8 381 aa4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 TOR2AQ5JU69 321 aa4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 ZBTB41Q5SVQ8 909 aa4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 TRMT10BQ6PF06 316 aaKnown RBP4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 EAF2Q96CJ1 260 aaPredicted RBP4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 FAXDC2Q96IV6 333 aa4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 FAM84AQ96KN4 292 aa4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 NOX5Q96PH1 765 aa4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 PPP1R16BQ96T49 567 aa4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 SLC13A1Q9BZW2 595 aa4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 GCM1Q9NP62 436 aa4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 CNOT6Q9ULM6 557 aaKnown RBP4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 WASF3Q9UPY6 502 aa4.8□□□□□ -1.64
EFCAB11-204ENST00000553871 PRSS38A1L453 326 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 KLHL33A6NCF5 533 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 H0Y858 1186 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 AKAP10O43572 662 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 FARP2O94887 1054 aaPredicted RBP4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 PARNO95453 639 aaKnown RBP4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 LPLP06858 475 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 RBP3P10745 1247 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 PI3P19957 117 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 XPAP23025 273 aaPredicted RBP4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 GLDCP23378 1020 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 ADCY8P40145 1251 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 RECQLP46063 649 aaPredicted RBP4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 GPR3P46089 330 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 SLC5A3P53794 718 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 SPIDRQ14159 915 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 PCBP2Q15366 365 aaKnown RBP eCLIP4.79□□□□□ -1.646e-9■■■□□ 17.4
EFCAB11-204ENST00000553871 INAVAQ3KP66 663 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 EFCAB2Q5VUJ9 269 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 CNKSR3Q6P9H4 555 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 FMNL3Q8IVF7 1028 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 WDR75Q8IWA0 830 aaKnown RBP4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 AUTS2Q8WXX7 1259 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 HIST1H2AHQ96KK5 128 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 HIST1H2AJQ99878 128 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 NOL10Q9BSC4 688 aaKnown RBP4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 KCTD10Q9H3F6 313 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 ZIM2Q9NZV7 527 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 KCMF1Q9P0J7 381 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 CHPF2Q9P2E5 772 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 FTSJ1Q9UET6 329 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 IP6K2Q9UHH9 426 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 ZNF180Q9UJW8 692 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 FBXO10Q9UK96 956 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 ZBTB21Q9ULJ3 1066 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 SYNPO2Q9UMS6 1093 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 USP18Q9UMW8 372 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 PCDHB6Q9Y5E3 794 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 GPR45Q9Y5Y3 372 aa4.79□□□□□ -1.64
EFCAB11-204ENST00000553871 MYPNQ86TC9 1320 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 TRIM75PA6NK02 468 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 SCGB1D2O95969 90 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 IL18BPO95998 194 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 OSMP13725 252 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 THBS2P35442 1172 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 LGALS4P56470 323 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 KRT85P78386 507 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 MRPS9P82933 396 aaKnown RBP4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 CD83Q01151 205 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 MOGSQ13724 837 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 DGKDQ16760 1214 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 PITRM1Q5JRX3 1037 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 XP32Q5T750 250 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 GRAMD4Q6IC98 578 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 UNQ6494/PRO21346Q6UXR6 183 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 ATG14Q6ZNE5 492 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 CXXC5Q7LFL8 322 aaKnown RBP4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 KANSL1Q7Z3B3 1105 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 RAVER1Q8IY67 606 aaKnown RBP4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 CHPFQ8IZ52 775 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 IFNL2Q8IZJ0 200 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 LINC00482Q8N8I6 264 aa4.78□□□□□ -1.64
EFCAB11-204ENST00000553871 CDYL2Q8N8U2 506 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms