RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 NFX1Q12986 1120 aaKnown RBP10.41□□□□□ -0.74
PRKCH-208ENST00000553846 MTMR1Q13613 665 aa10.41□□□□□ -0.74
PRKCH-208ENST00000553846 CLLU1OSQ5K130 101 aa10.41□□□□□ -0.74
PRKCH-208ENST00000553846 ANKRD45Q5TZF3 282 aa10.41□□□□□ -0.74
PRKCH-208ENST00000553846 ZNF598Q86UK7 904 aaKnown RBP10.41□□□□□ -0.74
PRKCH-208ENST00000553846 TMEM173Q86WV6 379 aaPredicted RBP10.41□□□□□ -0.74
PRKCH-208ENST00000553846 C12orf76Q8N812 135 aaPredicted RBP10.41□□□□□ -0.74
PRKCH-208ENST00000553846 CNTNAP3BQ96NU0 1288 aa10.41□□□□□ -0.74
PRKCH-208ENST00000553846 SPZ1Q9BXG8 430 aa10.41□□□□□ -0.74
PRKCH-208ENST00000553846 CNTNAP3Q9BZ76 1288 aa10.41□□□□□ -0.74
PRKCH-208ENST00000553846 ZBP1Q9H171 429 aa10.41□□□□□ -0.74
PRKCH-208ENST00000553846 SEMA4AQ9H3S1 761 aa10.41□□□□□ -0.74
PRKCH-208ENST00000553846 JADE2Q9NQC1 790 aa10.41□□□□□ -0.74
PRKCH-208ENST00000553846 DLGAP2Q9P1A6 1054 aa10.41□□□□□ -0.74
PRKCH-208ENST00000553846 IRAK3Q9Y616 596 aa10.41□□□□□ -0.74
PRKCH-208ENST00000553846 SPEGQ15772 3267 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 NFASCO94856 1347 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 KRBA1A5PL33 1030 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 N4BP1O75113 896 aaKnown RBP10.4□□□□□ -0.74
PRKCH-208ENST00000553846 CCNE2O96020 404 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 EPCAMP16422 314 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 ANTXR2P58335 489 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 ACTR2P61160 394 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 ITGB3BPQ13352 177 aaPredicted RBP10.4□□□□□ -0.74
PRKCH-208ENST00000553846 PUM1Q14671 1186 aaKnown RBP eCLIP10.4□□□□□ -0.74
PRKCH-208ENST00000553846 SMC1AQ14683 1233 aaKnown RBP10.4□□□□□ -0.74
PRKCH-208ENST00000553846 IMMTQ16891 758 aaKnown RBP10.4□□□□□ -0.74
PRKCH-208ENST00000553846 RARS2Q5T160 578 aaKnown RBP10.4□□□□□ -0.74
PRKCH-208ENST00000553846 SPOUT1Q5T280 376 aaKnown RBP10.4□□□□□ -0.74
PRKCH-208ENST00000553846 CES5AQ6NT32 575 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 LRRC43Q8N309 656 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 PLCD3Q8N3E9 789 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 LINC01465Q8N7H1 131 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 FLCNQ8NFG4 579 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 ZNF558Q96NG5 402 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 RTP3Q9BQQ7 232 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 MFSD1Q9H3U5 465 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 OSBPL3Q9H4L5 887 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 ATP6V0A4Q9HBG4 840 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 DZANK1Q9NVP4 752 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 SPG21Q9NZD8 308 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 PKD2L1Q9P0L9 805 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 SLC9A2Q9UBY0 812 aa10.4□□□□□ -0.74
PRKCH-208ENST00000553846 PUF60Q9UHX1 559 aaKnown RBP10.4□□□□□ -0.74
PRKCH-208ENST00000553846 COL1A2P08123 1366 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 WDR81Q562E7 1941 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 DENND3A2RUS2 1198 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 MAFGO15525 162 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 PAPLNO95428 1278 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 C22orf31O95567 290 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 ATP4AP20648 1035 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 KLRC1P26715 233 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 CACNB1Q02641 598 aaPredicted RBP10.39□□□□□ -0.75
PRKCH-208ENST00000553846 HDAC1Q13547 482 aaPredicted RBP10.39□□□□□ -0.75
PRKCH-208ENST00000553846 TDGQ13569 410 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 CWC27Q6UX04 472 aaKnown RBP10.39□□□□□ -0.75
PRKCH-208ENST00000553846 TMC7Q7Z402 723 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 KIAA2013Q8IYS2 634 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 SIX5Q8N196 739 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 SUMF1Q8NBK3 374 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 SMARCC2Q8TAQ2 1214 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 CYP2W1Q8TAV3 490 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 BCL7CQ8WUZ0 217 aaPredicted RBP10.39□□□□□ -0.75
PRKCH-208ENST00000553846 MAP3K14Q99558 947 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 VN1R3Q9BXE9 311 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 CYP26B1Q9NR63 512 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 KCNH7Q9NS40 1196 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 R4GN57 208 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 PATJQ8NI35 1801 aa10.39□□□□□ -0.75
PRKCH-208ENST00000553846 ATRXP46100 2492 aa10.38□□□□□ -0.75
PRKCH-208ENST00000553846 GPR182O15218 404 aa10.38□□□□□ -0.75
PRKCH-208ENST00000553846 NARSO43776 548 aaKnown RBP10.38□□□□□ -0.75
PRKCH-208ENST00000553846 SMARCA1P28370 1054 aa10.38□□□□□ -0.75
PRKCH-208ENST00000553846 SLC26A2P50443 739 aa10.38□□□□□ -0.75
PRKCH-208ENST00000553846 STAT5BP51692 787 aa10.38□□□□□ -0.75
PRKCH-208ENST00000553846 CRYBB1P53674 252 aaPredicted RBP10.38□□□□□ -0.75
PRKCH-208ENST00000553846 UBE2SQ16763 222 aa10.38□□□□□ -0.75
PRKCH-208ENST00000553846 KIZQ2M2Z5 673 aa10.38□□□□□ -0.75
PRKCH-208ENST00000553846 ABHD15Q6UXT9 468 aa10.38□□□□□ -0.75
PRKCH-208ENST00000553846 GPR149Q86SP6 731 aa10.38□□□□□ -0.75
PRKCH-208ENST00000553846 ECHDC2Q86YB7 292 aa10.38□□□□□ -0.75
PRKCH-208ENST00000553846 CCDC60Q8IWA6 550 aaPredicted RBP10.38□□□□□ -0.75
PRKCH-208ENST00000553846 PLEKHM2Q8IWE5 1019 aa10.38□□□□□ -0.75
PRKCH-208ENST00000553846 MAML2Q8IZL2 1156 aaPredicted RBP10.38□□□□□ -0.75
PRKCH-208ENST00000553846 IGDCC4Q8TDY8 1250 aa10.38□□□□□ -0.75
PRKCH-208ENST00000553846 PIBF1Q8WXW3 757 aa10.38□□□□□ -0.75
PRKCH-208ENST00000553846 OSMRQ99650 979 aa10.38□□□□□ -0.75
PRKCH-208ENST00000553846 ADAMTS10Q9H324 1103 aa10.38□□□□□ -0.75
PRKCH-208ENST00000553846 KCNK12Q9HB15 430 aa10.38□□□□□ -0.75
PRKCH-208ENST00000553846 CEP295Q9C0D2 2601 aa10.37□□□□□ -0.75
PRKCH-208ENST00000553846 HOXA2O43364 376 aa10.37□□□□□ -0.75
PRKCH-208ENST00000553846 CYP21A2P08686 494 aa10.37□□□□□ -0.75
PRKCH-208ENST00000553846 IBSPP21815 317 aaPredicted RBP10.37□□□□□ -0.75
PRKCH-208ENST00000553846 KRT17Q04695 432 aa10.37□□□□□ -0.75
PRKCH-208ENST00000553846 COL9A3Q14050 684 aaPredicted RBP10.37□□□□□ -0.75
PRKCH-208ENST00000553846 WTAPQ15007 396 aa10.37□□□□□ -0.75
PRKCH-208ENST00000553846 ATAT1Q5SQI0 421 aa10.37□□□□□ -0.75
PRKCH-208ENST00000553846 SRBD1Q8N5C6 995 aaKnown RBP10.37□□□□□ -0.75
PRKCH-208ENST00000553846 AUTS2Q8WXX7 1259 aa10.37□□□□□ -0.75
PRKCH-208ENST00000553846 CUL5Q93034 780 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms