RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 PARVGQ9HBI0 331 aa13.03□□□□□ -0.32
NEK9-202ENST00000553823 SLC39A2Q9NP94 309 aa13.03□□□□□ -0.32
NEK9-202ENST00000553823 ZNF215Q9UL58 517 aaPredicted RBP13.03□□□□□ -0.32
NEK9-202ENST00000553823 SFI1A8K8P3 1242 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 H3BRB1 525 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 ZNF286BP0CG31 522 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 RARBP10826 455 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.33
NEK9-202ENST00000553823 ERCC5P28715 1186 aaPredicted RBP13.02□□□□□ -0.33
NEK9-202ENST00000553823 CCND3P30281 292 aaPredicted RBP13.02□□□□□ -0.33
NEK9-202ENST00000553823 RFC5P40937 340 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 PRCPP42785 496 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 ZNF131P52739 623 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 POLGP54098 1239 aaPredicted RBP13.02□□□□□ -0.33
NEK9-202ENST00000553823 GJA9P57773 515 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 MAPK7Q13164 816 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 IQCB1Q15051 598 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 COBLL1Q53SF7 1204 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 KLHL10Q6JEL2 608 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 MAEAQ7L5Y9 396 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 SFR1Q86XK3 245 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 DAW1Q8N136 415 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 ADSSL1Q8N142 457 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 MYCT1Q8N699 235 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 KIAA0895Q8NCT3 520 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 MCPH1Q8NEM0 835 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 HPS3Q969F9 1004 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 DRC1Q96MC2 740 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 TUT1Q9H6E5 874 aaKnown RBP13.02□□□□□ -0.33
NEK9-202ENST00000553823 GRPEL1Q9HAV7 217 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 ATP6V0A4Q9HBG4 840 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 POLD4Q9HCU8 107 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 PDLIM7Q9NR12 457 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 SEL1LQ9UBV2 794 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 TRPC6Q9Y210 931 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 PCDHA2Q9Y5H9 948 aa13.02□□□□□ -0.33
NEK9-202ENST00000553823 SMTNL1A8MU46 457 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 BECN2A8MW95 431 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 GRK4P32298 578 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 MRE11P49959 708 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 EMC2Q15006 297 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 FSCN1Q16658 493 aaKnown RBP13.01□□□□□ -0.33
NEK9-202ENST00000553823 UVSSAQ2YD98 709 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 FAM102BQ5T8I3 360 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 LUZP1Q86V48 1076 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 EXOC8Q8IYI6 725 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 AOPEPQ8N6M6 819 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 SLC7A3Q8WY07 619 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 KIFAP3Q92845 792 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 CEP89Q96ST8 783 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 UPF3AQ9H1J1 476 aaKnown RBP13.01□□□□□ -0.33
NEK9-202ENST00000553823 RNPEPQ9H4A4 650 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 DHX33Q9H6R0 707 aaKnown RBP13.01□□□□□ -0.33
NEK9-202ENST00000553823 SPC25Q9HBM1 224 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 XPNPEP1Q9NQW7 623 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 OLFML3Q9NRN5 406 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 TBC1D7Q9P0N9 293 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 LARSQ9P2J5 1176 aaKnown RBP13.01□□□□□ -0.33
NEK9-202ENST00000553823 MAPK8IP1Q9UQF2 711 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 PTCH2Q9Y6C5 1203 aa13.01□□□□□ -0.33
NEK9-202ENST00000553823 TRIP12Q14669 1992 aaPredicted RBP13.01□□□□□ -0.33
NEK9-202ENST00000553823 CEP350Q5VT06 3117 aa13□□□□□ -0.33
NEK9-202ENST00000553823 SYNRGQ9UMZ2 1314 aa13□□□□□ -0.33
NEK9-202ENST00000553823 GOLGA6L19H0YKK7 550 aa13□□□□□ -0.33
NEK9-202ENST00000553823 PSMA7O14818 248 aa13□□□□□ -0.33
NEK9-202ENST00000553823 IKBKBO14920 756 aa13□□□□□ -0.33
NEK9-202ENST00000553823 KPNA6O60684 536 aa13□□□□□ -0.33
NEK9-202ENST00000553823 MAFO75444 373 aaPredicted RBP13□□□□□ -0.33
NEK9-202ENST00000553823 INHAP05111 366 aa13□□□□□ -0.33
NEK9-202ENST00000553823 MYL3P08590 195 aa13□□□□□ -0.33
NEK9-202ENST00000553823 C6orf222P0C671 652 aaPredicted RBP13□□□□□ -0.33
NEK9-202ENST00000553823 PLS3P13797 630 aa13□□□□□ -0.33
NEK9-202ENST00000553823 NKX3-2P78367 333 aa13□□□□□ -0.33
NEK9-202ENST00000553823 IRX5P78411 483 aaPredicted RBP13□□□□□ -0.33
NEK9-202ENST00000553823 BEX3Q00994 111 aa13□□□□□ -0.33
NEK9-202ENST00000553823 MYL5Q02045 173 aa13□□□□□ -0.33
NEK9-202ENST00000553823 TBC1D8BQ0IIM8 1120 aa13□□□□□ -0.33
NEK9-202ENST00000553823 PAK1Q13153 545 aa13□□□□□ -0.33
NEK9-202ENST00000553823 ZNF484Q5JVG2 852 aa13□□□□□ -0.33
NEK9-202ENST00000553823 ODR4Q5SWX8 454 aa13□□□□□ -0.33
NEK9-202ENST00000553823 DHX40Q8IX18 779 aaKnown RBP13□□□□□ -0.33
NEK9-202ENST00000553823 FAM178BQ8IXR5 827 aa13□□□□□ -0.33
NEK9-202ENST00000553823 MYOCDQ8IZQ8 938 aa13□□□□□ -0.33
NEK9-202ENST00000553823 GUF1Q8N442 669 aaKnown RBP13□□□□□ -0.33
NEK9-202ENST00000553823 NELFBQ8WX92 580 aa13□□□□□ -0.33
NEK9-202ENST00000553823 DHTKD1Q96HY7 919 aaPredicted RBP13□□□□□ -0.33
NEK9-202ENST00000553823 JPH2Q9BR39 696 aaPredicted RBP13□□□□□ -0.33
NEK9-202ENST00000553823 MRPL44Q9H9J2 332 aaKnown RBP13□□□□□ -0.33
NEK9-202ENST00000553823 GPRC5CQ9NQ84 441 aa13□□□□□ -0.33
NEK9-202ENST00000553823 CTNND2Q9UQB3 1225 aa13□□□□□ -0.33
NEK9-202ENST00000553823 SCN10AQ9Y5Y9 1956 aa13□□□□□ -0.33
NEK9-202ENST00000553823 COL1A2P08123 1366 aa12.99□□□□□ -0.33
NEK9-202ENST00000553823 ZBTB42B2RXF5 422 aa12.99□□□□□ -0.33
NEK9-202ENST00000553823 GAS2O43903 313 aaKnown RBP12.99□□□□□ -0.33
NEK9-202ENST00000553823 ZEB2O60315 1214 aa12.99□□□□□ -0.33
NEK9-202ENST00000553823 KIF20AO95235 890 aa12.99□□□□□ -0.33
NEK9-202ENST00000553823 F2P00734 622 aa12.99□□□□□ -0.33
NEK9-202ENST00000553823 MAPTP10636 758 aaKnown RBP12.99□□□□□ -0.33
NEK9-202ENST00000553823 INSRRP14616 1297 aa12.99□□□□□ -0.33
NEK9-202ENST00000553823 RTP1P59025 263 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms