RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 NOL8Q76FK4 1167 aaKnown RBP6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 RIOX2Q8IUF8 465 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SIAH1Q8IUQ4 282 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 IL22RA1Q8N6P7 574 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 PLD4Q96BZ4 506 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 DDX11Q96FC9 970 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 NUP88Q99567 741 aaPredicted RBP6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 CLDND1Q9NY35 253 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 STOML1Q9UBI4 398 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SWAP70Q9UH65 585 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 FAM184BQ9ULE4 1060 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ISY1Q9ULR0 285 aaKnown RBP6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ADAMTS5Q9UNA0 930 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 NOP58Q9Y2X3 529 aaKnown RBP6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 TMX2Q9Y320 296 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ASPMQ8IZT6 3477 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CYSRT1A8MQ03 144 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 B4GALT4O60513 344 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 WISP1O95388 367 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 SNAI1O95863 264 aaPredicted RBP6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ADRB1P08588 477 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 RLBP1P12271 317 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ACTN1P12814 892 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CDK8P49336 464 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 PTK7Q13308 1070 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 SMAD4Q13485 552 aaKnown RBP6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 TIGD5Q53EQ6 642 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CRTC2Q53ET0 693 aaPredicted RBP6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 SNRNP48Q6IEG0 339 aaKnown RBP6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 GDF6Q6KF10 455 aaPredicted RBP6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 RPAINQ86UA6 219 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 DTX1Q86Y01 620 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ERC1Q8IUD2 1116 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 AMOTL1Q8IY63 956 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CPXCR1Q8N123 301 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 GALNT11Q8NCW6 608 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CHMP4CQ96CF2 233 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 RIPOR3Q96MK2 946 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 C17orf80Q9BSJ5 609 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 SPC25Q9HBM1 224 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ADGRE2Q9UHX3 823 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 PPP1R9AQ9ULJ8 1098 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 USP20Q9Y2K6 914 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CTDP1Q9Y5B0 961 aaPredicted RBP6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 NAV1Q8NEY1 1877 aa6.64□□□□□ -1.35
SMARCE1P3-201ENST00000553649 DNAJC25-GNG10A0A024R161 153 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 TCRBV5S4A2TA0A5A2 114 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 USP17L12C9JPN9 530 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 USP17L21D6R901 530 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 OPLAHO14841 1288 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 TM4SF5O14894 197 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 GSC2O15499 205 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CABYRO75952 493 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CHGBP05060 677 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 IFIT2P09913 472 aaKnown RBP6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 EPB42P16452 691 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 RASA1P20936 1047 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 BEX3Q00994 111 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CEP85Q6P2H3 762 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CXCL17Q6UXB2 119 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ANKRD35Q8N283 1001 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CHAMP1Q96JM3 812 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 SLF1Q9BQI6 1058 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 TEX13BQ9BXU2 312 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 KATNBL1Q9H079 304 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 BOLA2Q9H3K6 86 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 KANSL2Q9H9L4 492 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 RAVER2Q9HCJ3 691 aaKnown RBP6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 HOMER2Q9NSB8 354 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ZNF214Q9UL59 606 aaPredicted RBP6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 RIPK3Q9Y572 518 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 PCDHGC5Q9Y5F6 944 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 SLC4A4Q9Y6R1 1079 aa6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 GCN1Q92616 2671 aaKnown RBP6.63□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ZNFX1Q9P2E3 1918 aaKnown RBP6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ASTN1O14525 1302 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 TBX10O75333 385 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 BAIAP3O94812 1187 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 LMNAP02545 664 aaKnown RBP6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CYP2C9P11712 490 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 PTGS1P23219 599 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 RFC2P35250 354 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 COPB2P35606 906 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ATXN1P54253 815 aaKnown RBP6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 WDR5P61964 334 aaKnown RBP6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 DEFB103AP81534 67 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ITGA7Q13683 1181 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ACVR2BQ13705 512 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CCDC144BQ3MJ40 725 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 C12orf60Q5U649 245 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 KIAA0319Q5VV43 1072 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 TMED8Q6PL24 325 aaPredicted RBP6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 C16orf86Q6ZW13 317 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CLASRPQ8N2M8 674 aaKnown RBP6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 REPS2Q8NFH8 660 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 PANK1Q8TE04 598 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CCDC17Q96LX7 622 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 FGD4Q96M96 766 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 NSUN3Q9H649 340 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms