RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 GHRHRQ02643 423 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 STXBP2Q15833 593 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 RRP12Q5JTH9 1297 aaKnown RBP8.5□□□□□ -1.05
ATXN3-219ENST00000553488 GPATCH4Q5T3I0 446 aaKnown RBP8.5□□□□□ -1.05
ATXN3-219ENST00000553488 FOXR1Q6PIV2 292 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 HFE2Q6ZVN8 426 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 FBXO11Q86XK2 927 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 TBC1D10CQ8IV04 446 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 SLC9A9Q8IVB4 645 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 ADHFE1Q8IWW8 467 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 NSUN6Q8TEA1 469 aaKnown RBP8.5□□□□□ -1.05
ATXN3-219ENST00000553488 TTC14Q96N46 770 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 SAMD11Q96NU1 681 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 UIMC1Q96RL1 719 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 IWS1Q96ST2 819 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 OSBPL7Q9BZF2 842 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 NSUN3Q9H649 340 aaKnown RBP8.5□□□□□ -1.05
ATXN3-219ENST00000553488 RC3H2Q9HBD1 1191 aaKnown RBP8.5□□□□□ -1.05
ATXN3-219ENST00000553488 PLXNA4Q9HCM2 1894 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 HCN2Q9UL51 889 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 FAM186AA6NE01 2351 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 NEDD4P46934 1319 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 FAM181BA6NEQ2 426 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 SFI1A8K8P3 1242 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 EML1O00423 815 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 HSPD1P10809 573 aaKnown RBP8.49□□□□□ -1.05
ATXN3-219ENST00000553488 EIF2AK2P19525 551 aaKnown RBP8.49□□□□□ -1.05
ATXN3-219ENST00000553488 NOS2P35228 1153 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 IRS1P35568 1242 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 HAND2P61296 217 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 GPM6BQ13491 265 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 LAMC2Q13753 1193 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 PTPROQ16827 1216 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 QRICH1Q2TAL8 776 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 HSDL1Q3SXM5 330 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 RPAINQ86UA6 219 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 ZNF589Q86UQ0 364 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-219ENST00000553488 NLRP8Q86W28 1048 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 TMEM192Q8IY95 271 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 TOP1MTQ969P6 601 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 SNX27Q96L92 541 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 FAM227BQ96M60 508 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 CRBNQ96SW2 442 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 RMDN3Q96TC7 470 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 C16orf70Q9BSU1 422 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 UBA5Q9GZZ9 404 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 PXMP2Q9NR77 195 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 HELLSQ9NRZ9 838 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 TOMM22Q9NS69 142 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 CTNNA3Q9UI47 895 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 RCAN3Q9UKA8 241 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 DMXL1Q9Y485 3027 aa8.49□□□□□ -1.05
ATXN3-219ENST00000553488 RSPH10B2B2RC85 870 aa8.48□□□□□ -1.05
ATXN3-219ENST00000553488 C5orf67F2Z3F1 127 aa8.48□□□□□ -1.05
ATXN3-219ENST00000553488 TBX10O75333 385 aa8.48□□□□□ -1.05
ATXN3-219ENST00000553488 EIF3JO75822 258 aaKnown RBP8.48□□□□□ -1.05
ATXN3-219ENST00000553488 RSPH10BP0C881 870 aa8.48□□□□□ -1.05
ATXN3-219ENST00000553488 PCP11498 1178 aaKnown RBP8.48□□□□□ -1.05
ATXN3-219ENST00000553488 UBA1P22314 1058 aaKnown RBP8.48□□□□□ -1.05
ATXN3-219ENST00000553488 TXLNAP40222 546 aa8.48□□□□□ -1.05
ATXN3-219ENST00000553488 THPOP40225 353 aa8.48□□□□□ -1.05
ATXN3-219ENST00000553488 HSD17B4P51659 736 aa8.48□□□□□ -1.05
ATXN3-219ENST00000553488 DLX2Q07687 328 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-219ENST00000553488 SMAD2Q15796 467 aaKnown RBP8.48□□□□□ -1.05
ATXN3-219ENST00000553488 HERC4Q5GLZ8 1057 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-219ENST00000553488 EFHC2Q5JST6 749 aa8.48□□□□□ -1.05
ATXN3-219ENST00000553488 ADGRF4Q8IZF3 695 aa8.48□□□□□ -1.05
ATXN3-219ENST00000553488 PGBD3Q8N328 593 aa8.48□□□□□ -1.05
ATXN3-219ENST00000553488 TSEN2Q8NCE0 465 aaKnown RBP8.48□□□□□ -1.05
ATXN3-219ENST00000553488 PRSS33Q8NF86 280 aa8.48□□□□□ -1.05
ATXN3-219ENST00000553488 IL31RAQ8NI17 732 aa8.48□□□□□ -1.05
ATXN3-219ENST00000553488 YME1L1Q96TA2 773 aa8.48□□□□□ -1.05
ATXN3-219ENST00000553488 PDCD2LQ9BRP1 358 aa8.48□□□□□ -1.05
ATXN3-219ENST00000553488 TSPAN10Q9H1Z9 355 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-219ENST00000553488 CLDND1Q9NY35 253 aa8.48□□□□□ -1.05
ATXN3-219ENST00000553488 MRVI1Q9Y6F6 885 aa8.48□□□□□ -1.05
ATXN3-219ENST00000553488 PTPRZ1P23471 2315 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-219ENST00000553488 FNDC1Q4ZHG4 1894 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-219ENST00000553488 GVINP1Q7Z2Y8 2422 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 MBTPS2O43462 519 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 BNIP3LO60238 219 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 CAND2O75155 1236 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 PPFIA4O75335 1185 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 GGPS1O95749 300 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 SEC13P55735 322 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 SP2Q02086 613 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 HYAL1Q12794 435 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 TBCELQ5QJ74 424 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 CELF3Q5SZQ8 465 aaKnown RBP8.47□□□□□ -1.05
ATXN3-219ENST00000553488 ARHGEF16Q5VV41 709 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 LYPD4Q6UWN0 246 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 DGKHQ86XP1 1220 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 MCF2L2Q86YR7 1114 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 DHX37Q8IY37 1157 aaKnown RBP8.47□□□□□ -1.05
ATXN3-219ENST00000553488 SEPT8Q92599 483 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 EVI5LQ96CN4 794 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 SPATA33Q96N06 139 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 ZKSCAN3Q9BRR0 538 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 VRTNQ9H8Y1 702 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 JMJD4Q9H9V9 463 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms