RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 CCNT1O60563 726 aaKnown RBP17.89■□□□□ 0.45
CDK4-215ENST00000553237 LINC00271P0C7V0 271 aa17.89■□□□□ 0.45
CDK4-215ENST00000553237 STAG3L1P0CL83 205 aa17.89■□□□□ 0.45
CDK4-215ENST00000553237 BMP1P13497 986 aa17.89■□□□□ 0.45
CDK4-215ENST00000553237 TMOD1P28289 359 aa17.89■□□□□ 0.45
CDK4-215ENST00000553237 BMPR1AP36894 532 aa17.89■□□□□ 0.45
CDK4-215ENST00000553237 GATMP50440 423 aa17.89■□□□□ 0.45
CDK4-215ENST00000553237 NR5A1Q13285 461 aa17.89■□□□□ 0.45
CDK4-215ENST00000553237 PTPROQ16827 1216 aa17.89■□□□□ 0.45
CDK4-215ENST00000553237 C8orf34Q49A92 452 aa17.89■□□□□ 0.45
CDK4-215ENST00000553237 PAN2Q504Q3 1202 aaKnown RBP17.89■□□□□ 0.45
CDK4-215ENST00000553237 EARS2Q5JPH6 523 aaKnown RBP17.89■□□□□ 0.45
CDK4-215ENST00000553237 B3GNT9Q6UX72 402 aa17.89■□□□□ 0.45
CDK4-215ENST00000553237 FAM228AQ86W67 206 aa17.89■□□□□ 0.45
CDK4-215ENST00000553237 CRIPAKQ8N1N5 446 aa17.89■□□□□ 0.45
CDK4-215ENST00000553237 BANK1Q8NDB2 785 aa17.89■□□□□ 0.45
CDK4-215ENST00000553237 NSUN7Q8NE18 718 aaKnown RBP17.89■□□□□ 0.45
CDK4-215ENST00000553237 NECAB3Q96P71 396 aaPredicted RBP17.89■□□□□ 0.45
CDK4-215ENST00000553237 MAP7D2Q96T17 732 aa17.89■□□□□ 0.45
CDK4-215ENST00000553237 UHRF1Q96T88 793 aaPredicted RBP17.89■□□□□ 0.45
CDK4-215ENST00000553237 ADAM2Q99965 735 aa17.89■□□□□ 0.45
CDK4-215ENST00000553237 SEPT9Q9UHD8 586 aaPredicted RBP17.89■□□□□ 0.45
CDK4-215ENST00000553237 LRFN2Q9ULH4 789 aa17.89■□□□□ 0.45
CDK4-215ENST00000553237 LOXHD1Q8IVV2 1947 aa17.89■□□□□ 0.45
CDK4-215ENST00000553237 SPTBN5Q9NRC6 3674 aaKnown RBP17.89■□□□□ 0.45
CDK4-215ENST00000553237 DENND3A2RUS2 1198 aa17.88■□□□□ 0.45
CDK4-215ENST00000553237 FAM205CA6NFA0 338 aa17.88■□□□□ 0.45
CDK4-215ENST00000553237 EML1O00423 815 aa17.88■□□□□ 0.45
CDK4-215ENST00000553237 JAK2O60674 1132 aa17.88■□□□□ 0.45
CDK4-215ENST00000553237 STBD1O95210 358 aa17.88■□□□□ 0.45
CDK4-215ENST00000553237 KRT2P35908 639 aa17.88■□□□□ 0.45
CDK4-215ENST00000553237 SARSP49591 514 aaKnown RBP17.88■□□□□ 0.45
CDK4-215ENST00000553237 TBC1D8BQ0IIM8 1120 aa17.88■□□□□ 0.45
CDK4-215ENST00000553237 MTERF2Q49AM1 385 aa17.88■□□□□ 0.45
CDK4-215ENST00000553237 ODR4Q5SWX8 454 aa17.88■□□□□ 0.45
CDK4-215ENST00000553237 LINC01465Q8N7H1 131 aa17.88■□□□□ 0.45
CDK4-215ENST00000553237 ADAMTS10Q9H324 1103 aa17.88■□□□□ 0.45
CDK4-215ENST00000553237 PCDHB7Q9Y5E2 793 aa17.88■□□□□ 0.45
CDK4-215ENST00000553237 MRPL42Q9Y6G3 142 aaKnown RBP17.88■□□□□ 0.45
CDK4-215ENST00000553237 DDX11L8A8MPP1 907 aa17.87■□□□□ 0.45
CDK4-215ENST00000553237 MARCH6O60337 910 aa17.87■□□□□ 0.45
CDK4-215ENST00000553237 CSPG5O95196 566 aa17.87■□□□□ 0.45
CDK4-215ENST00000553237 RB1P06400 928 aa17.87■□□□□ 0.45
CDK4-215ENST00000553237 TARBP2Q15633 366 aaKnown RBP17.87■□□□□ 0.45
CDK4-215ENST00000553237 XKR3Q5GH77 459 aa17.87■□□□□ 0.45
CDK4-215ENST00000553237 PPP4R3AQ6IN85 833 aa17.87■□□□□ 0.45
CDK4-215ENST00000553237 CMTR2Q8IYT2 770 aaKnown RBP17.87■□□□□ 0.45
CDK4-215ENST00000553237 CLP1Q92989 425 aaKnown RBP17.87■□□□□ 0.45
CDK4-215ENST00000553237 FAM20AQ96MK3 541 aa17.87■□□□□ 0.45
CDK4-215ENST00000553237 NIFKQ9BYG3 293 aaKnown RBP17.87■□□□□ 0.45
CDK4-215ENST00000553237 KCNMB3Q9NPA1 279 aa17.87■□□□□ 0.45
CDK4-215ENST00000553237 RGS18Q9NS28 235 aa17.87■□□□□ 0.45
CDK4-215ENST00000553237 RWDD3Q9Y3V2 267 aa17.87■□□□□ 0.45
CDK4-215ENST00000553237 COL4A6Q14031 1691 aa17.87■□□□□ 0.45
CDK4-215ENST00000553237 TNFRSF10AO00220 468 aa17.86■□□□□ 0.45
CDK4-215ENST00000553237 GRM6O15303 877 aa17.86■□□□□ 0.45
CDK4-215ENST00000553237 GCFC2P16383 781 aaKnown RBP17.86■□□□□ 0.45
CDK4-215ENST00000553237 DRP2Q13474 957 aa17.86■□□□□ 0.45
CDK4-215ENST00000553237 SLC24A5Q71RS6 500 aa17.86■□□□□ 0.45
CDK4-215ENST00000553237 HAS1Q92839 578 aa17.86■□□□□ 0.45
CDK4-215ENST00000553237 SCLT1Q96NL6 688 aa17.86■□□□□ 0.45
CDK4-215ENST00000553237 C11orf84Q9BUA3 381 aaPredicted RBP17.86■□□□□ 0.45
CDK4-215ENST00000553237 BRMS1Q9HCU9 246 aa17.86■□□□□ 0.45
CDK4-215ENST00000553237 C1orf112Q9NSG2 853 aa17.86■□□□□ 0.45
CDK4-215ENST00000553237 VAV3Q9UKW4 847 aa17.86■□□□□ 0.45
CDK4-215ENST00000553237 TCF20Q9UGU0 1960 aaKnown RBP17.86■□□□□ 0.45
CDK4-215ENST00000553237 C9IYK1 514 aa17.85■□□□□ 0.45
CDK4-215ENST00000553237 C5orf67F2Z3F1 127 aa17.85■□□□□ 0.45
CDK4-215ENST00000553237 EIF4BP23588 611 aaKnown RBP17.85■□□□□ 0.45
CDK4-215ENST00000553237 GPC3P51654 580 aa17.85■□□□□ 0.45
CDK4-215ENST00000553237 PSMC5P62195 406 aa17.85■□□□□ 0.45
CDK4-215ENST00000553237 ST3GAL1Q11201 340 aa17.85■□□□□ 0.45
CDK4-215ENST00000553237 PPP2R5CQ13362 524 aa17.85■□□□□ 0.45
CDK4-215ENST00000553237 TIGD5Q53EQ6 642 aa17.85■□□□□ 0.45
CDK4-215ENST00000553237 TCEAL5Q5H9L2 206 aa17.85■□□□□ 0.45
CDK4-215ENST00000553237 FAM102BQ5T8I3 360 aa17.85■□□□□ 0.45
CDK4-215ENST00000553237 PLA2G4FQ68DD2 849 aa17.85■□□□□ 0.45
CDK4-215ENST00000553237 POTEDQ86YR6 584 aa17.85■□□□□ 0.45
CDK4-215ENST00000553237 TNFRSF25Q93038 417 aa17.85■□□□□ 0.45
CDK4-215ENST00000553237 CEP89Q96ST8 783 aa17.85■□□□□ 0.45
CDK4-215ENST00000553237 UBE2ZQ9H832 354 aaPredicted RBP17.85■□□□□ 0.45
CDK4-215ENST00000553237 ALG13Q9NP73 1137 aaKnown RBP17.85■□□□□ 0.45
CDK4-215ENST00000553237 WDR81Q562E7 1941 aa17.84■□□□□ 0.45
CDK4-215ENST00000553237 BTBD18B2RXH4 712 aa17.84■□□□□ 0.45
CDK4-215ENST00000553237 CSDE1O75534 798 aaKnown RBP17.84■□□□□ 0.45
CDK4-215ENST00000553237 FGFR4P22455 802 aa17.84■□□□□ 0.45
CDK4-215ENST00000553237 KCNA5P22460 613 aa17.84■□□□□ 0.45
CDK4-215ENST00000553237 DSC3Q14574 896 aa17.84■□□□□ 0.45
CDK4-215ENST00000553237 EP400NLQ6ZTU2 488 aa17.84■□□□□ 0.45
CDK4-215ENST00000553237 ANO5Q75V66 913 aa17.84■□□□□ 0.45
CDK4-215ENST00000553237 NLRP7Q8WX94 980 aa17.84■□□□□ 0.45
CDK4-215ENST00000553237 NAP1L4Q99733 375 aaKnown RBP17.84■□□□□ 0.45
CDK4-215ENST00000553237 MYO7AQ13402 2215 aa17.84■□□□□ 0.45
CDK4-215ENST00000553237 NLRC5Q86WI3 1866 aa17.84■□□□□ 0.45
CDK4-215ENST00000553237 BRWD1Q9NSI6 2320 aa17.83■□□□□ 0.45
CDK4-215ENST00000553237 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.83■□□□□ 0.44
CDK4-215ENST00000553237 TBKBP1A7MCY6 615 aa17.83■□□□□ 0.44
CDK4-215ENST00000553237 BAG4O95429 457 aaKnown RBP17.83■□□□□ 0.44
CDK4-215ENST00000553237 MMP1P03956 469 aa17.83■□□□□ 0.44
CDK4-215ENST00000553237 DARSP14868 501 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms