RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 PTPAQ15257 358 aa15.77■□□□□ 0.12
PTCH1-226ENST00000553011 ECM1Q16610 540 aa15.77■□□□□ 0.12
PTCH1-226ENST00000553011 RASIP1Q5U651 963 aa15.77■□□□□ 0.12
PTCH1-226ENST00000553011 HAUS3Q68CZ6 603 aa15.77■□□□□ 0.12
PTCH1-226ENST00000553011 OTUD6AQ7L8S5 288 aa15.77■□□□□ 0.12
PTCH1-226ENST00000553011 NME8Q8N427 588 aa15.77■□□□□ 0.12
PTCH1-226ENST00000553011 MAP7D2Q96T17 732 aa15.77■□□□□ 0.12
PTCH1-226ENST00000553011 MMTAG2Q9BU76 263 aaKnown RBP15.77■□□□□ 0.12
PTCH1-226ENST00000553011 CELF4Q9BZC1 486 aaKnown RBP15.77■□□□□ 0.12
PTCH1-226ENST00000553011 CDHR5Q9HBB8 845 aa15.77■□□□□ 0.12
PTCH1-226ENST00000553011 ANKEF1Q9NU02 776 aa15.77■□□□□ 0.12
PTCH1-226ENST00000553011 AKT3Q9Y243 479 aa15.77■□□□□ 0.12
PTCH1-226ENST00000553011 GINS2Q9Y248 185 aa15.77■□□□□ 0.12
PTCH1-226ENST00000553011 LAMA3Q16787 3333 aa15.77■□□□□ 0.11
PTCH1-226ENST00000553011 ZBBXA8MT70 800 aa15.76■□□□□ 0.11
PTCH1-226ENST00000553011 M0QZ92 97 aa15.76■□□□□ 0.11
PTCH1-226ENST00000553011 SOX1O00570 391 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-226ENST00000553011 ACTN1P12814 892 aa15.76■□□□□ 0.11
PTCH1-226ENST00000553011 PDIA4P13667 645 aaKnown RBP15.76■□□□□ 0.11
PTCH1-226ENST00000553011 TMOD1P28289 359 aa15.76■□□□□ 0.11
PTCH1-226ENST00000553011 MARCKSP29966 332 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-226ENST00000553011 RARRES1P49788 294 aa15.76■□□□□ 0.11
PTCH1-226ENST00000553011 KIZQ2M2Z5 673 aa15.76■□□□□ 0.11
PTCH1-226ENST00000553011 FOXD4L6Q3SYB3 417 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-226ENST00000553011 PLEKHG4Q58EX7 1191 aa15.76■□□□□ 0.11
PTCH1-226ENST00000553011 FBXO47Q5MNV8 452 aa15.76■□□□□ 0.11
PTCH1-226ENST00000553011 CNKSR3Q6P9H4 555 aa15.76■□□□□ 0.11
PTCH1-226ENST00000553011 FOXD4L3Q6VB84 417 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-226ENST00000553011 DBF4BQ8NFT6 615 aa15.76■□□□□ 0.11
PTCH1-226ENST00000553011 ZNF668Q96K58 619 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-226ENST00000553011 DHX33Q9H6R0 707 aaKnown RBP15.76■□□□□ 0.11
PTCH1-226ENST00000553011 LAMA2P24043 3122 aaKnown RBP15.75■□□□□ 0.11
PTCH1-226ENST00000553011 KDM3AQ9Y4C1 1321 aa15.75■□□□□ 0.11
PTCH1-226ENST00000553011 MYH11P35749 1972 aa15.75■□□□□ 0.11
PTCH1-226ENST00000553011 GPR32O75388 356 aa15.75■□□□□ 0.11
PTCH1-226ENST00000553011 RFC5P40937 340 aa15.75■□□□□ 0.11
PTCH1-226ENST00000553011 POLGP54098 1239 aaPredicted RBP15.75■□□□□ 0.11
PTCH1-226ENST00000553011 NLRP11P59045 1033 aaKnown RBP15.75■□□□□ 0.11
PTCH1-226ENST00000553011 EMC2Q15006 297 aa15.75■□□□□ 0.11
PTCH1-226ENST00000553011 LRIT3Q3SXY7 679 aa15.75■□□□□ 0.11
PTCH1-226ENST00000553011 KRT79Q5XKE5 535 aa15.75■□□□□ 0.11
PTCH1-226ENST00000553011 FAM109BQ6ICB4 259 aaPredicted RBP15.75■□□□□ 0.11
PTCH1-226ENST00000553011 SLC7A3Q8WY07 619 aa15.75■□□□□ 0.11
PTCH1-226ENST00000553011 SEPT8Q92599 483 aa15.75■□□□□ 0.11
PTCH1-226ENST00000553011 CCDC43Q96MW1 224 aaKnown RBP15.75■□□□□ 0.11
PTCH1-226ENST00000553011 NACC1Q96RE7 527 aa15.75■□□□□ 0.11
PTCH1-226ENST00000553011 OSMRQ99650 979 aa15.75■□□□□ 0.11
PTCH1-226ENST00000553011 MTIF3Q9H2K0 278 aaKnown RBP15.75■□□□□ 0.11
PTCH1-226ENST00000553011 AGO3Q9H9G7 860 aaKnown RBP15.75■□□□□ 0.11
PTCH1-226ENST00000553011 XPNPEP1Q9NQW7 623 aa15.75■□□□□ 0.11
PTCH1-226ENST00000553011 TFIP11Q9UBB9 837 aaKnown RBP15.75■□□□□ 0.11
PTCH1-226ENST00000553011 KIAA1024Q9UPX6 916 aa15.75■□□□□ 0.11
PTCH1-226ENST00000553011 ZDHHC9Q9Y397 364 aa15.75■□□□□ 0.11
PTCH1-226ENST00000553011 PPME1Q9Y570 386 aa15.75■□□□□ 0.11
PTCH1-226ENST00000553011 TTC3P53804 2025 aa15.74■□□□□ 0.11
PTCH1-226ENST00000553011 GRXCR1A8MXD5 290 aa15.74■□□□□ 0.11
PTCH1-226ENST00000553011 BRD1O95696 1058 aa15.74■□□□□ 0.11
PTCH1-226ENST00000553011 XRCC6P12956 609 aaKnown RBP eCLIP15.74■□□□□ 0.11
PTCH1-226ENST00000553011 MUTP22033 750 aa15.74■□□□□ 0.11
PTCH1-226ENST00000553011 CD52P31358 61 aa15.74■□□□□ 0.11
PTCH1-226ENST00000553011 ZRSR1Q15695 479 aaKnown RBP15.74■□□□□ 0.11
PTCH1-226ENST00000553011 TSHZ1Q6ZSZ6 1077 aa15.74■□□□□ 0.11
PTCH1-226ENST00000553011 TMEM40Q8WWA1 233 aa15.74■□□□□ 0.11
PTCH1-226ENST00000553011 TMEM143Q96AN5 459 aa15.74■□□□□ 0.11
PTCH1-226ENST00000553011 ZNF396Q96N95 335 aaPredicted RBP15.74■□□□□ 0.11
PTCH1-226ENST00000553011 JPH2Q9BR39 696 aaPredicted RBP15.74■□□□□ 0.11
PTCH1-226ENST00000553011 IFIH1Q9BYX4 1025 aaKnown RBP15.74■□□□□ 0.11
PTCH1-226ENST00000553011 ADAMTS10Q9H324 1103 aa15.74■□□□□ 0.11
PTCH1-226ENST00000553011 DDX19AQ9NUU7 478 aaKnown RBP15.74■□□□□ 0.11
PTCH1-226ENST00000553011 SUCLA2Q9P2R7 463 aaPredicted RBP15.74■□□□□ 0.11
PTCH1-226ENST00000553011 DAXXQ9UER7 740 aaPredicted RBP15.74■□□□□ 0.11
PTCH1-226ENST00000553011 FBXO2Q9UK22 296 aaPredicted RBP15.74■□□□□ 0.11
PTCH1-226ENST00000553011 STK24Q9Y6E0 443 aa15.74■□□□□ 0.11
PTCH1-226ENST00000553011 USO1O60763 962 aaKnown RBP15.73■□□□□ 0.11
PTCH1-226ENST00000553011 BAIAP3O94812 1187 aa15.73■□□□□ 0.11
PTCH1-226ENST00000553011 NASPP49321 788 aaPredicted RBP15.73■□□□□ 0.11
PTCH1-226ENST00000553011 DNM2P50570 870 aa15.73■□□□□ 0.11
PTCH1-226ENST00000553011 GPC3P51654 580 aa15.73■□□□□ 0.11
PTCH1-226ENST00000553011 CRYBB1P53674 252 aaPredicted RBP15.73■□□□□ 0.11
PTCH1-226ENST00000553011 SLC39A14Q15043 492 aa15.73■□□□□ 0.11
PTCH1-226ENST00000553011 KCNK18Q7Z418 384 aa15.73■□□□□ 0.11
PTCH1-226ENST00000553011 KSR1Q8IVT5 923 aa15.73■□□□□ 0.11
PTCH1-226ENST00000553011 LRCH3Q96II8 777 aa15.73■□□□□ 0.11
PTCH1-226ENST00000553011 PNMA5Q96PV4 448 aa15.73■□□□□ 0.11
PTCH1-226ENST00000553011 PLIN2Q99541 437 aa15.73■□□□□ 0.11
PTCH1-226ENST00000553011 MTRQ99707 1265 aa15.73■□□□□ 0.11
PTCH1-226ENST00000553011 DBR1Q9UK59 544 aaKnown RBP15.73■□□□□ 0.11
PTCH1-226ENST00000553011 NOC2LQ9Y3T9 749 aaKnown RBP15.73■□□□□ 0.11
PTCH1-226ENST00000553011 SLC4A7Q9Y6M7 1214 aa15.73■□□□□ 0.11
PTCH1-226ENST00000553011 SQORQ9Y6N5 450 aa15.73■□□□□ 0.11
PTCH1-226ENST00000553011 ABHD14A-ACY1A0A1B0GW23 586 aa15.72■□□□□ 0.11
PTCH1-226ENST00000553011 ARHGEF35A5YM69 484 aa15.72■□□□□ 0.11
PTCH1-226ENST00000553011 E9PMD0 336 aa15.72■□□□□ 0.11
PTCH1-226ENST00000553011 DGAT1O75907 488 aa15.72■□□□□ 0.11
PTCH1-226ENST00000553011 LONP1P36776 959 aaKnown RBP15.72■□□□□ 0.11
PTCH1-226ENST00000553011 FXR1P51114 621 aaKnown RBP eCLIP15.72■□□□□ 0.11
PTCH1-226ENST00000553011 WDR5P61964 334 aaKnown RBP15.72■□□□□ 0.11
PTCH1-226ENST00000553011 DEFB103AP81534 67 aa15.72■□□□□ 0.11
PTCH1-226ENST00000553011 GRB10Q13322 594 aa15.72■□□□□ 0.11
PTCH1-226ENST00000553011 IKBKEQ14164 716 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms