RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 SCLT1Q96NL6 688 aa9.88□□□□□ -0.83
TMEM116-217ENST00000552801 LSG1Q9H089 658 aaKnown RBP9.88□□□□□ -0.83
TMEM116-217ENST00000552801 TLE6Q9H808 572 aa9.88□□□□□ -0.83
TMEM116-217ENST00000552801 AGO4Q9HCK5 861 aaKnown RBP9.88□□□□□ -0.83
TMEM116-217ENST00000552801 ZNF302Q9NR11 478 aa9.88□□□□□ -0.83
TMEM116-217ENST00000552801 C1orf112Q9NSG2 853 aa9.88□□□□□ -0.83
TMEM116-217ENST00000552801 PLAGL2Q9UPG8 496 aa9.88□□□□□ -0.83
TMEM116-217ENST00000552801 CEP131Q9UPN4 1083 aa9.88□□□□□ -0.83
TMEM116-217ENST00000552801 MRPL42Q9Y6G3 142 aaKnown RBP9.88□□□□□ -0.83
TMEM116-217ENST00000552801 V9GY48 417 aaPredicted RBP9.88□□□□□ -0.83
TMEM116-217ENST00000552801 TTC3P53804 2025 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 IGSF9BQ9UPX0 1349 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 KLF18A0A0U1RQI7 1052 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 TBKBP1A7MCY6 615 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 PPP1R3GB7ZBB8 358 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 TK2O00142 265 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 MBTPS2O43462 519 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 ARP10275 920 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 KLRC1P26715 233 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 TMOD1P28289 359 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 NRIP1P48552 1158 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 BMS1Q14692 1282 aaKnown RBP9.87□□□□□ -0.83
TMEM116-217ENST00000552801 SMAD2Q15796 467 aaKnown RBP9.87□□□□□ -0.83
TMEM116-217ENST00000552801 TMEM266Q2M3C6 531 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 ZNF484Q5JVG2 852 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 MARCH8Q5T0T0 291 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 JAKMIP3Q5VZ66 844 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 APOA5Q6Q788 366 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 ADGRD1Q6QNK2 874 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 DHX32Q7L7V1 743 aaKnown RBP9.87□□□□□ -0.83
TMEM116-217ENST00000552801 RBM23Q86U06 439 aaKnown RBP9.87□□□□□ -0.83
TMEM116-217ENST00000552801 SPNS2Q8IVW8 549 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 KLHL23Q8NBE8 558 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 TMEM87AQ8NBN3 555 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 ATP8B4Q8TF62 1192 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 POF1BQ8WVV4 589 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 ZBTB10Q96DT7 871 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 MAP7D2Q96T17 732 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 ZNF577Q9BSK1 485 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 AGO3Q9H9G7 860 aaKnown RBP9.87□□□□□ -0.83
TMEM116-217ENST00000552801 ATP6V0A4Q9HBG4 840 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 C6orf50Q9HD87 102 aa9.87□□□□□ -0.83
TMEM116-217ENST00000552801 PUF60Q9UHX1 559 aaKnown RBP9.87□□□□□ -0.83
TMEM116-217ENST00000552801 MYH9P35579 1960 aaKnown RBP9.87□□□□□ -0.83
TMEM116-217ENST00000552801 COL1A2P08123 1366 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 XIRP2A4UGR9 3374 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 MUC3AQ02505 3323 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 CNTNAP5Q8WYK1 1306 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 RBAK-RBAKDNI3L0D1 243 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 HOXA2O43364 376 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 PSAPP07602 524 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 ZSCAN20P17040 1043 aaPredicted RBP9.86□□□□□ -0.83
TMEM116-217ENST00000552801 GNA11P29992 359 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 CA8P35219 290 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 SREBF1P36956 1147 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 SARSP49591 514 aaKnown RBP9.86□□□□□ -0.83
TMEM116-217ENST00000552801 METAP2P50579 478 aaKnown RBP eCLIP9.86□□□□□ -0.83
TMEM116-217ENST00000552801 SETQ01105 290 aaPredicted RBP9.86□□□□□ -0.83
TMEM116-217ENST00000552801 NECTIN1Q15223 517 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 SWSAP1Q6NVH7 229 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 NIPA1Q7RTP0 329 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 ZBTB33Q86T24 672 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 SUGP1Q8IWZ8 645 aaKnown RBP9.86□□□□□ -0.83
TMEM116-217ENST00000552801 CYP2W1Q8TAV3 490 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 BICD2Q8TD16 824 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 ZNF689Q96CS4 500 aaPredicted RBP9.86□□□□□ -0.83
TMEM116-217ENST00000552801 PPP1R16BQ96T49 567 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 ADAM2Q99965 735 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 SLC4A5Q9BY07 1137 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 C11orf16Q9NQ32 467 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 TBC1D22BQ9NU19 505 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 BARHL2Q9NY43 387 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 AKT3Q9Y243 479 aa9.86□□□□□ -0.83
TMEM116-217ENST00000552801 KDM3AQ9Y4C1 1321 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 TULP1O00294 542 aaPredicted RBP9.85□□□□□ -0.83
TMEM116-217ENST00000552801 IPO5O00410 1097 aaKnown RBP9.85□□□□□ -0.83
TMEM116-217ENST00000552801 MEIS1O00470 390 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 ITGB1P05556 798 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 LAG3P18627 525 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 IRS1P35568 1242 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 UBE3AQ05086 875 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 PDE12Q6L8Q7 609 aaKnown RBP9.85□□□□□ -0.83
TMEM116-217ENST00000552801 SLC24A5Q71RS6 500 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 ALYREFQ86V81 257 aaKnown RBP9.85□□□□□ -0.83
TMEM116-217ENST00000552801 SMAP1Q8IYB5 467 aaPredicted RBP9.85□□□□□ -0.83
TMEM116-217ENST00000552801 REXO1Q8N1G1 1221 aaKnown RBP9.85□□□□□ -0.83
TMEM116-217ENST00000552801 EFHBQ8N7U6 833 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 SPPL3Q8TCT6 385 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 FAM167AQ96KS9 214 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 TCEANC2Q96MN5 208 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 PCYT2Q99447 389 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 KCNH6Q9H252 994 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 ENTPD7Q9NQZ7 604 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 TLR9Q9NR96 1032 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 TMEM260Q9NX78 707 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 MUTYHQ9UIF7 546 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 VPS9D1Q9Y2B5 631 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 KIAA1671Q9BY89 1806 aa9.85□□□□□ -0.83
TMEM116-217ENST00000552801 EVPLQ92817 2033 aa9.84□□□□□ -0.83
TMEM116-217ENST00000552801 MAGEB2O15479 319 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms