RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 MIIPQ5JXC2 388 aa10.86□□□□□ -0.67
TMEM116-216ENST00000552800 NUDT18Q6ZVK8 323 aa10.86□□□□□ -0.67
TMEM116-216ENST00000552800 MOB2Q70IA6 237 aa10.86□□□□□ -0.67
TMEM116-216ENST00000552800 TMC6Q7Z403 805 aa10.86□□□□□ -0.67
TMEM116-216ENST00000552800 FRMD5Q7Z6J6 570 aa10.86□□□□□ -0.67
TMEM116-216ENST00000552800 DAW1Q8N136 415 aa10.86□□□□□ -0.67
TMEM116-216ENST00000552800 AFAP1L1Q8TED9 768 aa10.86□□□□□ -0.67
TMEM116-216ENST00000552800 CCDC102AQ96A19 550 aa10.86□□□□□ -0.67
TMEM116-216ENST00000552800 FGD4Q96M96 766 aa10.86□□□□□ -0.67
TMEM116-216ENST00000552800 MPHOSPH6Q99547 160 aaKnown RBP10.86□□□□□ -0.67
TMEM116-216ENST00000552800 TUBGCP2Q9BSJ2 902 aa10.86□□□□□ -0.67
TMEM116-216ENST00000552800 MKNK1Q9BUB5 465 aa10.86□□□□□ -0.67
TMEM116-216ENST00000552800 NIFKQ9BYG3 293 aaKnown RBP10.86□□□□□ -0.67
TMEM116-216ENST00000552800 TTYH3Q9C0H2 523 aa10.86□□□□□ -0.67
TMEM116-216ENST00000552800 PARVGQ9HBI0 331 aa10.86□□□□□ -0.67
TMEM116-216ENST00000552800 TXNRD2Q9NNW7 524 aa10.86□□□□□ -0.67
TMEM116-216ENST00000552800 HOMER2Q9NSB8 354 aa10.86□□□□□ -0.67
TMEM116-216ENST00000552800 DMAC2Q9NW81 257 aa10.86□□□□□ -0.67
TMEM116-216ENST00000552800 FAM184BQ9ULE4 1060 aa10.86□□□□□ -0.67
TMEM116-216ENST00000552800 TRPM7Q96QT4 1865 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 RBM47A0AV96 593 aaKnown RBP10.85□□□□□ -0.67
TMEM116-216ENST00000552800 TRIM49BA6NDI0 452 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 N4BP3O15049 544 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 MAPK13O15264 365 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 PMM2O15305 246 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 PSAPP07602 524 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 SKILP12757 684 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 IDEP14735 1019 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 ERCC3P19447 782 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 SFPQP23246 707 aaKnown RBP eCLIP10.85□□□□□ -0.67
TMEM116-216ENST00000552800 HNRNPH3P31942 346 aaKnown RBP10.85□□□□□ -0.67
TMEM116-216ENST00000552800 INHBEP58166 350 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 ERVK-9P63128 1117 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 ERVK-24P63145 666 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 GTF2BQ00403 316 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 CDK17Q00537 523 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 NEDD9Q14511 834 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 MAN2A1Q16706 1144 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 EAPPQ56P03 285 aaPredicted RBP10.85□□□□□ -0.67
TMEM116-216ENST00000552800 SPRYD7Q5W111 196 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 MAMDC4Q6UXC1 1216 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 GADL1Q6ZQY3 521 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 OTUD6AQ7L8S5 288 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 TRIM59Q8IWR1 403 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 ANKRD35Q8N283 1001 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 C2orf69Q8N8R5 385 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 SPIRE2Q8WWL2 714 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 TATDN2Q93075 761 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 HVCN1Q96D96 273 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 BORCS6Q96GS4 357 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 TRIM47Q96LD4 638 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 ZNF830Q96NB3 372 aaPredicted RBP10.85□□□□□ -0.67
TMEM116-216ENST00000552800 PURBQ96QR8 312 aaKnown RBP10.85□□□□□ -0.67
TMEM116-216ENST00000552800 CEP89Q96ST8 783 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 TSG101Q99816 390 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 RUSC1Q9BVN2 902 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 TYW1Q9NV66 732 aaKnown RBP10.85□□□□□ -0.67
TMEM116-216ENST00000552800 LARSQ9P2J5 1176 aaKnown RBP10.85□□□□□ -0.67
TMEM116-216ENST00000552800 SLC9A2Q9UBY0 812 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 SEPT9Q9UHD8 586 aaPredicted RBP10.85□□□□□ -0.67
TMEM116-216ENST00000552800 CAPN11Q9UMQ6 739 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 MAPK8IP1Q9UQF2 711 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 MYH9P35579 1960 aaKnown RBP10.85□□□□□ -0.67
TMEM116-216ENST00000552800 MYH11P35749 1972 aa10.85□□□□□ -0.67
TMEM116-216ENST00000552800 IGSF9BQ9UPX0 1349 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 ARHGAP6O43182 974 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 TGFB1I1O43294 461 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 NRDCO43847 1150 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 LGR5O75473 907 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 MYCLP12524 364 aaPredicted RBP10.84□□□□□ -0.67
TMEM116-216ENST00000552800 YWHABP31946 246 aaKnown RBP10.84□□□□□ -0.67
TMEM116-216ENST00000552800 CCNA1P78396 465 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 SP2Q02086 613 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 CYP4A11Q02928 519 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 ZNF792Q3KQV3 632 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 CST9Q5W186 159 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 MAP1SQ66K74 1059 aaPredicted RBP10.84□□□□□ -0.67
TMEM116-216ENST00000552800 CCDC62Q6P9F0 684 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 ZNF662Q6ZS27 426 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 STXBP4Q6ZWJ1 553 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 CNGA4Q8IV77 575 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 MSL3Q8N5Y2 521 aaKnown RBP10.84□□□□□ -0.67
TMEM116-216ENST00000552800 GPRC5AQ8NFJ5 357 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 GOLGA5Q8TBA6 731 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 PIGOQ8TEQ8 1089 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 ATP6V0A1Q93050 837 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 HPS3Q969F9 1004 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 RRAGCQ9HB90 399 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 METTL14Q9HCE5 456 aaKnown RBP10.84□□□□□ -0.67
TMEM116-216ENST00000552800 JPH1Q9HDC5 661 aaPredicted RBP10.84□□□□□ -0.67
TMEM116-216ENST00000552800 MAGEC2Q9UBF1 373 aaPredicted RBP10.84□□□□□ -0.67
TMEM116-216ENST00000552800 PYCARDQ9ULZ3 195 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 LRRC37A2A6NM11 1700 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 SYNGAP1Q96PV0 1343 aa10.84□□□□□ -0.67
TMEM116-216ENST00000552800 NPHP3-ACAD11A0A0J9YXS1 232 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 GTPBP10A4D1E9 387 aaKnown RBP10.83□□□□□ -0.68
TMEM116-216ENST00000552800 RASSF10A6NK89 507 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 BTBD19C9JJ37 291 aa10.83□□□□□ -0.68
TMEM116-216ENST00000552800 AKR1B15C9JRZ8 316 aaPredicted RBP10.83□□□□□ -0.68
TMEM116-216ENST00000552800 ZBTB39O15060 712 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms