RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 POTEGQ6S5H5 508 aa14.65□□□□□ -0.06
CDK4-212ENST00000552388 RSPH3Q86UC2 560 aa14.65□□□□□ -0.06
CDK4-212ENST00000552388 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.65□□□□□ -0.06
CDK4-212ENST00000552388 KCTD17Q8N5Z5 321 aa14.65□□□□□ -0.06
CDK4-212ENST00000552388 KRI1Q8N9T8 703 aaKnown RBP14.65□□□□□ -0.06
CDK4-212ENST00000552388 PIGOQ8TEQ8 1089 aa14.65□□□□□ -0.06
CDK4-212ENST00000552388 DNAJB3Q8WWF6 145 aa14.65□□□□□ -0.06
CDK4-212ENST00000552388 CEP170P1Q96L14 293 aa14.65□□□□□ -0.06
CDK4-212ENST00000552388 LBHD1Q9BQE6 289 aaPredicted RBP14.65□□□□□ -0.06
CDK4-212ENST00000552388 SH2D3AQ9BRG2 576 aa14.65□□□□□ -0.06
CDK4-212ENST00000552388 CSRNP2Q9H175 543 aa14.65□□□□□ -0.06
CDK4-212ENST00000552388 DBR1Q9UK59 544 aaKnown RBP14.65□□□□□ -0.06
CDK4-212ENST00000552388 KIAA1024Q9UPX6 916 aa14.65□□□□□ -0.06
CDK4-212ENST00000552388 KDM3AQ9Y4C1 1321 aa14.65□□□□□ -0.06
CDK4-212ENST00000552388 PARNO95453 639 aaKnown RBP14.64□□□□□ -0.07
CDK4-212ENST00000552388 UBA7P41226 1012 aa14.64□□□□□ -0.07
CDK4-212ENST00000552388 RARRES1P49788 294 aa14.64□□□□□ -0.07
CDK4-212ENST00000552388 CCL23P55773 120 aa14.64□□□□□ -0.07
CDK4-212ENST00000552388 KRT85P78386 507 aa14.64□□□□□ -0.07
CDK4-212ENST00000552388 XKR9Q5GH70 373 aa14.64□□□□□ -0.07
CDK4-212ENST00000552388 FAM26DQ5JW98 314 aa14.64□□□□□ -0.07
CDK4-212ENST00000552388 EFCAB12Q6NXP0 572 aa14.64□□□□□ -0.07
CDK4-212ENST00000552388 LRRC8DQ7L1W4 858 aa14.64□□□□□ -0.07
CDK4-212ENST00000552388 EXOC8Q8IYI6 725 aa14.64□□□□□ -0.07
CDK4-212ENST00000552388 KIAA0319LQ8IZA0 1049 aa14.64□□□□□ -0.07
CDK4-212ENST00000552388 NME8Q8N427 588 aa14.64□□□□□ -0.07
CDK4-212ENST00000552388 TMEM199Q8N511 208 aa14.64□□□□□ -0.07
CDK4-212ENST00000552388 ZNF579Q8NAF0 562 aaKnown RBP14.64□□□□□ -0.07
CDK4-212ENST00000552388 KCNG4Q8TDN1 519 aa14.64□□□□□ -0.07
CDK4-212ENST00000552388 JPH2Q9BR39 696 aaPredicted RBP14.64□□□□□ -0.07
CDK4-212ENST00000552388 CCSER1Q9C0I3 900 aa14.64□□□□□ -0.07
CDK4-212ENST00000552388 NT5C3AQ9H0P0 336 aa14.64□□□□□ -0.07
CDK4-212ENST00000552388 FAM49AQ9H0Q0 323 aaPredicted RBP14.64□□□□□ -0.07
CDK4-212ENST00000552388 DHX33Q9H6R0 707 aaKnown RBP14.64□□□□□ -0.07
CDK4-212ENST00000552388 RCOR1Q9UKL0 485 aa14.64□□□□□ -0.07
CDK4-212ENST00000552388 A0A087WWV3 80 aa14.63□□□□□ -0.07
CDK4-212ENST00000552388 RSPH10B2B2RC85 870 aa14.63□□□□□ -0.07
CDK4-212ENST00000552388 RSPH10BP0C881 870 aa14.63□□□□□ -0.07
CDK4-212ENST00000552388 TMOD1P28289 359 aa14.63□□□□□ -0.07
CDK4-212ENST00000552388 RFC2P35250 354 aa14.63□□□□□ -0.07
CDK4-212ENST00000552388 RFC5P40937 340 aa14.63□□□□□ -0.07
CDK4-212ENST00000552388 FPGSQ05932 587 aa14.63□□□□□ -0.07
CDK4-212ENST00000552388 MGAT3Q09327 533 aa14.63□□□□□ -0.07
CDK4-212ENST00000552388 GRB10Q13322 594 aa14.63□□□□□ -0.07
CDK4-212ENST00000552388 CABP7Q86V35 215 aa14.63□□□□□ -0.07
CDK4-212ENST00000552388 METTL13Q8N6R0 699 aa14.63□□□□□ -0.07
CDK4-212ENST00000552388 SLC7A3Q8WY07 619 aa14.63□□□□□ -0.07
CDK4-212ENST00000552388 SCLYQ96I15 445 aa14.63□□□□□ -0.07
CDK4-212ENST00000552388 CLIC6Q96NY7 704 aa14.63□□□□□ -0.07
CDK4-212ENST00000552388 PNMA5Q96PV4 448 aa14.63□□□□□ -0.07
CDK4-212ENST00000552388 DDX19AQ9NUU7 478 aaKnown RBP14.63□□□□□ -0.07
CDK4-212ENST00000552388 MICAL3Q7RTP6 2002 aa14.63□□□□□ -0.07
CDK4-212ENST00000552388 GAS2O43903 313 aaKnown RBP14.62□□□□□ -0.07
CDK4-212ENST00000552388 DGAT1O75907 488 aa14.62□□□□□ -0.07
CDK4-212ENST00000552388 CHRNA1P02708 482 aa14.62□□□□□ -0.07
CDK4-212ENST00000552388 CTSHP09668 335 aa14.62□□□□□ -0.07
CDK4-212ENST00000552388 CSF2RAP15509 400 aa14.62□□□□□ -0.07
CDK4-212ENST00000552388 CLCN3P51790 818 aa14.62□□□□□ -0.07
CDK4-212ENST00000552388 POLGP54098 1239 aaPredicted RBP14.62□□□□□ -0.07
CDK4-212ENST00000552388 MRPS6P82932 125 aaKnown RBP14.62□□□□□ -0.07
CDK4-212ENST00000552388 PPIGQ13427 754 aaKnown RBP eCLIP14.62□□□□□ -0.07
CDK4-212ENST00000552388 MKRN4PQ13434 485 aaPredicted RBP14.62□□□□□ -0.07
CDK4-212ENST00000552388 GPNMBQ14956 572 aa14.62□□□□□ -0.07
CDK4-212ENST00000552388 TMEM119Q4V9L6 283 aa14.62□□□□□ -0.07
CDK4-212ENST00000552388 IER5Q5VY09 327 aa14.62□□□□□ -0.07
CDK4-212ENST00000552388 LRRC71Q8N4P6 559 aa14.62□□□□□ -0.07
CDK4-212ENST00000552388 SYMPKQ92797 1274 aaKnown RBP14.62□□□□□ -0.07
CDK4-212ENST00000552388 VWCEQ96DN2 955 aa14.62□□□□□ -0.07
CDK4-212ENST00000552388 CALML4Q96GE6 196 aa14.62□□□□□ -0.07
CDK4-212ENST00000552388 EPSTI1Q96J88 318 aa14.62□□□□□ -0.07
CDK4-212ENST00000552388 CHAMP1Q96JM3 812 aa14.62□□□□□ -0.07
CDK4-212ENST00000552388 CCDC43Q96MW1 224 aaKnown RBP14.62□□□□□ -0.07
CDK4-212ENST00000552388 MAP7D2Q96T17 732 aa14.62□□□□□ -0.07
CDK4-212ENST00000552388 SUGCTQ9HAC7 445 aa14.62□□□□□ -0.07
CDK4-212ENST00000552388 PTPRSQ13332 1948 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 TMEM265A0A087WTH1 108 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 E9PMD0 336 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 CUTAO60888 179 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 EYA4O95677 639 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 CXCL10P02778 98 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 PFKMP08237 780 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 SMAD3P84022 425 aaKnown RBP14.61□□□□□ -0.07
CDK4-212ENST00000552388 TMEM62Q0P6H9 643 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 DRP2Q13474 957 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 MBTPS1Q14703 1052 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 EMC2Q15006 297 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 SPECC1Q5M775 1068 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 C9orf50Q5SZB4 431 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 AXDND1Q5T1B0 1012 aaPredicted RBP14.61□□□□□ -0.07
CDK4-212ENST00000552388 ZNF697Q5TEC3 545 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 USP49Q70CQ1 688 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 RPUSD2Q8IZ73 545 aaKnown RBP14.61□□□□□ -0.07
CDK4-212ENST00000552388 ZNF710Q8N1W2 664 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 LEO1Q8WVC0 666 aaPredicted RBP14.61□□□□□ -0.07
CDK4-212ENST00000552388 CDK5RAP3Q96JB5 506 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 IPO9Q96P70 1041 aaKnown RBP14.61□□□□□ -0.07
CDK4-212ENST00000552388 MTRQ99707 1265 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 SCAND2PQ9GZW5 306 aaPredicted RBP14.61□□□□□ -0.07
CDK4-212ENST00000552388 BHMT2Q9H2M3 363 aa14.61□□□□□ -0.07
CDK4-212ENST00000552388 IL23AQ9NPF7 189 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms