RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 C6orf222P0C671 652 aaPredicted RBP11.52□□□□□ -0.57
NEK3-203ENST00000551355 CASP1P29466 404 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 CCND3P30281 292 aaPredicted RBP11.52□□□□□ -0.57
NEK3-203ENST00000551355 ZNF165P49910 485 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 DNM2P50570 870 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 SMTNP53814 917 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 NPEPPSP55786 919 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 TBC1D8BQ0IIM8 1120 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 COASYQ13057 564 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 ALCAMQ13740 583 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 PPP2R5AQ15172 486 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 MTERF2Q49AM1 385 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 ANO6Q4KMQ2 910 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 GNASQ5JWF2 1037 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 FAM26FQ5R3K3 315 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 PLA2G4FQ68DD2 849 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 CTU1Q7Z7A3 348 aaKnown RBP11.52□□□□□ -0.57
NEK3-203ENST00000551355 RNF180Q86T96 592 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 RETREG2Q8NC44 543 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 FAM200AQ8TCP9 573 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 TCP11Q8WWU5 503 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 MTG1Q9BT17 334 aaPredicted RBP11.52□□□□□ -0.57
NEK3-203ENST00000551355 PDLIM7Q9NR12 457 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 SYNRGQ9UMZ2 1314 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 GOLGA6L3A6NEY3 463 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 SMTNL1A8MU46 457 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 PSMA7O14818 248 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 HIP1RO75146 1068 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 MYL3P08590 195 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 ZNF286BP0CG31 522 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 HSPA8P11142 646 aaKnown RBP11.51□□□□□ -0.57
NEK3-203ENST00000551355 GNAT1P11488 350 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 PLS3P13797 630 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 CAPN2P17655 700 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 MARK3P27448 753 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 TMOD1P28289 359 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 TPM4P67936 248 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 CDC42EP1Q00587 391 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 TRIM32Q13049 653 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 DMP1Q13316 513 aaPredicted RBP11.51□□□□□ -0.57
NEK3-203ENST00000551355 EMC2Q15006 297 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 DPCR1Q3MIW9 517 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 SLC9C1Q4G0N8 1177 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 FAM102BQ5T8I3 360 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 IER5Q5VY09 327 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 FOXR2Q6PJQ5 311 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 TRMT1LQ7Z2T5 733 aaKnown RBP11.51□□□□□ -0.57
NEK3-203ENST00000551355 TRIM50Q86XT4 487 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 ZNF710Q8N1W2 664 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 MYCT1Q8N699 235 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 ARRDC4Q8NCT1 418 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 KLHDC9Q8NEP7 349 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 DHTKD1Q96HY7 919 aaPredicted RBP11.51□□□□□ -0.57
NEK3-203ENST00000551355 IFT74Q96LB3 600 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 CEP89Q96ST8 783 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 TSEN34Q9BSV6 310 aaKnown RBP11.51□□□□□ -0.57
NEK3-203ENST00000551355 SEZ6LQ9BYH1 1024 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 DNAJC25Q9H1X3 360 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 RNPEPQ9H4A4 650 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 ZHX3Q9H4I2 956 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 PCDHB13Q9Y5F0 798 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 PHLPP2Q6ZVD8 1323 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 NRCAMQ92823 1304 aa11.51□□□□□ -0.57
NEK3-203ENST00000551355 IGKV6-21A0A0C4DH24 114 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 NPHP3-ACAD11A0A0J9YXS1 232 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 BICDL2A1A5D9 508 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 MOXD2PA6NHM9 499 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 BECN2A8MW95 431 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 HAS3O00219 553 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 IKBKBO14920 756 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 EIF3DO15371 548 aaKnown RBP eCLIP11.5□□□□□ -0.57
NEK3-203ENST00000551355 ASAP2O43150 1006 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 ADAMTS4O75173 837 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 RPLP2P05387 115 aaKnown RBP11.5□□□□□ -0.57
NEK3-203ENST00000551355 INSRRP14616 1297 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 BMP6P22004 513 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 PURAQ00577 322 aaKnown RBP11.5□□□□□ -0.57
NEK3-203ENST00000551355 RAD51AP2Q09MP3 1159 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 PPFIA1Q13136 1202 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 MXD4Q14582 209 aaPredicted RBP11.5□□□□□ -0.57
NEK3-203ENST00000551355 MFSD10Q14728 455 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 KIAA0753Q2KHM9 967 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 ODR4Q5SWX8 454 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 ISM2Q6H9L7 571 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 FBXO46Q6PJ61 603 aaPredicted RBP11.5□□□□□ -0.57
NEK3-203ENST00000551355 FAM178BQ8IXR5 827 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 MYOCDQ8IZQ8 938 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 ADSSL1Q8N142 457 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 GUF1Q8N442 669 aaKnown RBP11.5□□□□□ -0.57
NEK3-203ENST00000551355 SPIRE2Q8WWL2 714 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 KCNN1Q92952 543 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 NTPCRQ9BSD7 190 aaKnown RBP11.5□□□□□ -0.57
NEK3-203ENST00000551355 ST6GALNAC4Q9H4F1 302 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 MRPL44Q9H9J2 332 aaKnown RBP11.5□□□□□ -0.57
NEK3-203ENST00000551355 UBE4BO95155 1302 aa11.5□□□□□ -0.57
NEK3-203ENST00000551355 TMEM150BA6NC51 233 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 ZBTB42B2RXF5 422 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 PPP1R3GB7ZBB8 358 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 GOLGA6L19H0YKK7 550 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 PGK1P00558 417 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms