RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 hCG_1984214I3L0E3 225 aa8.71□□□□□ -1.02
NEK3-201ENST00000550331 RNF225M0QZC1 329 aaPredicted RBP8.71□□□□□ -1.02
NEK3-201ENST00000550331 FOSP01100 380 aaPredicted RBP8.71□□□□□ -1.02
NEK3-201ENST00000550331 IRX6P78412 446 aaPredicted RBP8.71□□□□□ -1.02
NEK3-201ENST00000550331 GPM6BQ13491 265 aa8.71□□□□□ -1.02
NEK3-201ENST00000550331 COL9A3Q14050 684 aaPredicted RBP8.71□□□□□ -1.02
NEK3-201ENST00000550331 LPIN1Q14693 890 aa8.71□□□□□ -1.02
NEK3-201ENST00000550331 FBXO47Q5MNV8 452 aa8.71□□□□□ -1.02
NEK3-201ENST00000550331 MARCH8Q5T0T0 291 aa8.71□□□□□ -1.02
NEK3-201ENST00000550331 APOA5Q6Q788 366 aa8.71□□□□□ -1.02
NEK3-201ENST00000550331 TSHZ1Q6ZSZ6 1077 aa8.71□□□□□ -1.02
NEK3-201ENST00000550331 FAM43BQ6ZT52 329 aaPredicted RBP8.71□□□□□ -1.02
NEK3-201ENST00000550331 CCDC82Q8N4S0 544 aa8.71□□□□□ -1.02
NEK3-201ENST00000550331 ZNF713Q8N859 430 aaPredicted RBP8.71□□□□□ -1.02
NEK3-201ENST00000550331 DNAJB3Q8WWF6 145 aa8.71□□□□□ -1.02
NEK3-201ENST00000550331 PABPC5Q96DU9 382 aaKnown RBP8.71□□□□□ -1.02
NEK3-201ENST00000550331 C11orf84Q9BUA3 381 aaPredicted RBP8.71□□□□□ -1.02
NEK3-201ENST00000550331 UPF3BQ9BZI7 483 aaKnown RBP8.71□□□□□ -1.02
NEK3-201ENST00000550331 LMAN2LQ9H0V9 348 aa8.71□□□□□ -1.02
NEK3-201ENST00000550331 AZI2Q9H6S1 392 aa8.71□□□□□ -1.02
NEK3-201ENST00000550331 KCNH7Q9NS40 1196 aa8.71□□□□□ -1.02
NEK3-201ENST00000550331 SLC9A2Q9UBY0 812 aa8.71□□□□□ -1.02
NEK3-201ENST00000550331 PRKAG3Q9UGI9 489 aa8.71□□□□□ -1.02
NEK3-201ENST00000550331 ADGRA3Q8IWK6 1321 aa8.71□□□□□ -1.02
NEK3-201ENST00000550331 CNTNAP5Q8WYK1 1306 aa8.71□□□□□ -1.02
NEK3-201ENST00000550331 SPTBN4Q9H254 2564 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 MYH6P13533 1939 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 hCG_1642624A0A1W2PR95 340 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 ENPP3O14638 875 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 NCK2O43639 380 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 DGKIO75912 1065 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 LINC00271P0C7V0 271 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 INSRRP14616 1297 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 CTNNB1P35222 781 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 IRS1P35568 1242 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 BMPR1AP36894 532 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 SLC26A2P50443 739 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 RCAN1P53805 252 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 NAPAP54920 295 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 MRPS6P82932 125 aaKnown RBP8.7□□□□□ -1.02
NEK3-201ENST00000550331 AP3B2Q13367 1082 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 BMP2KLQ5H9B9 411 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 TCEAL5Q5H9L2 206 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 IER5Q5VY09 327 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 WWC2Q6AWC2 1192 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 PLPPR4Q7Z2D5 763 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 RAB11FIP4Q86YS3 637 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 ADHFE1Q8IWW8 467 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 PRSS33Q8NF86 280 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 CLP1Q92989 425 aaKnown RBP8.7□□□□□ -1.02
NEK3-201ENST00000550331 ZNF689Q96CS4 500 aaPredicted RBP8.7□□□□□ -1.02
NEK3-201ENST00000550331 NEK1Q96PY6 1258 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 PCYT2Q99447 389 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 MXRA8Q9BRK3 442 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 SDF4Q9BRK5 362 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 PLVAPQ9BX97 442 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 FTHL17Q9BXU8 183 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 LRRC2Q9BYS8 371 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 GLT8D2Q9H1C3 349 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 RIC8AQ9NPQ8 531 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 CDY2AQ9Y6F7 541 aa8.7□□□□□ -1.02
NEK3-201ENST00000550331 CFAP54Q96N23 3096 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 KMT2EQ8IZD2 1858 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 M0QZ92 97 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 STXBP3O00186 592 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 ZBTB43O43298 467 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 SREBF1P36956 1147 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 ADCY7P51828 1080 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 ACTR2P61160 394 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 IGBP1P78318 339 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 FUT2Q10981 343 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 BTG3Q14201 252 aaPredicted RBP8.69□□□□□ -1.02
NEK3-201ENST00000550331 RTN1Q16799 776 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 TSGA10IPQ3SY00 556 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 CEP55Q53EZ4 464 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 DHX32Q7L7V1 743 aaKnown RBP8.69□□□□□ -1.02
NEK3-201ENST00000550331 NIPA1Q7RTP0 329 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 CMTR2Q8IYT2 770 aaKnown RBP8.69□□□□□ -1.02
NEK3-201ENST00000550331 CYP2W1Q8TAV3 490 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 MRGPRX2Q96LB1 330 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 FAM49AQ9H0Q0 323 aaPredicted RBP8.69□□□□□ -1.02
NEK3-201ENST00000550331 AGO3Q9H9G7 860 aaKnown RBP8.69□□□□□ -1.02
NEK3-201ENST00000550331 AGO4Q9HCK5 861 aaKnown RBP8.69□□□□□ -1.02
NEK3-201ENST00000550331 CLDND1Q9NY35 253 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 MUTYHQ9UIF7 546 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 PCDHA2Q9Y5H9 948 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 IGSF9BQ9UPX0 1349 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 KDM3AQ9Y4C1 1321 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 CACNA1HO95180 2353 aa8.69□□□□□ -1.02
NEK3-201ENST00000550331 IGKV6D-21A0A0A0MT36 114 aa8.68□□□□□ -1.02
NEK3-201ENST00000550331 SMIM35A0A1B0GVV1 85 aa8.68□□□□□ -1.02
NEK3-201ENST00000550331 MEIS1O00470 390 aa8.68□□□□□ -1.02
NEK3-201ENST00000550331 GRM6O15303 877 aa8.68□□□□□ -1.02
NEK3-201ENST00000550331 ATG7O95352 703 aa8.68□□□□□ -1.02
NEK3-201ENST00000550331 MMP1P03956 469 aa8.68□□□□□ -1.02
NEK3-201ENST00000550331 HMGB1P09429 215 aaKnown RBP8.68□□□□□ -1.02
NEK3-201ENST00000550331 ARP10275 920 aa8.68□□□□□ -1.02
NEK3-201ENST00000550331 CD52P31358 61 aa8.68□□□□□ -1.02
NEK3-201ENST00000550331 CLK2P49760 499 aaKnown RBP8.68□□□□□ -1.02
NEK3-201ENST00000550331 STAT5BP51692 787 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms